RNA–Protein interactions for RNA: ENST00000563047.1

GGA2-204, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 2, humanhuman

TSL 5

Gene GGA2, Length 366 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA2-204ENST00000563047 USP17L18D6R9N7 530 aa25.74■■□□□ 1.71
GGA2-204ENST00000563047 USP17L22D6RA61 530 aa25.74■■□□□ 1.71
GGA2-204ENST00000563047 USP17L17D6RBQ6 530 aa25.74■■□□□ 1.71
GGA2-204ENST00000563047 USP17L19D6RCP7 530 aa25.74■■□□□ 1.71
GGA2-204ENST00000563047 USP17L20D6RJB6 530 aa25.74■■□□□ 1.71
GGA2-204ENST00000563047 SHMT1P34896 483 aa25.74■■□□□ 1.71
GGA2-204ENST00000563047 CACNB2Q08289 660 aaPredicted RBP25.74■■□□□ 1.71
GGA2-204ENST00000563047 USP17L24Q0WX57 530 aa25.74■■□□□ 1.71
GGA2-204ENST00000563047 ABCB5Q2M3G0 1257 aa25.74■■□□□ 1.71
GGA2-204ENST00000563047 PLEKHH3Q7Z736 793 aa25.74■■□□□ 1.71
GGA2-204ENST00000563047 CCAR1Q8IX12 1150 aaKnown RBP25.74■■□□□ 1.71
GGA2-204ENST00000563047 ACER1Q8TDN7 264 aa25.74■■□□□ 1.71
GGA2-204ENST00000563047 KIAA1683Q9H0B3 1180 aa25.74■■□□□ 1.71
GGA2-204ENST00000563047 A0A1W2PPC1 479 aa25.73■■□□□ 1.71
GGA2-204ENST00000563047 ZKSCAN1P17029 563 aaPredicted RBP25.73■■□□□ 1.71
GGA2-204ENST00000563047 CCL14Q16627 93 aa25.73■■□□□ 1.71
GGA2-204ENST00000563047 HSP90AB4PQ58FF6 505 aa25.73■■□□□ 1.71
GGA2-204ENST00000563047 CATSPERGQ6ZRH7 1159 aa25.73■■□□□ 1.71
GGA2-204ENST00000563047 TRMT44Q8IYL2 757 aaKnown RBP25.73■■□□□ 1.71
GGA2-204ENST00000563047 C7orf61Q8IZ16 206 aa25.73■■□□□ 1.71
GGA2-204ENST00000563047 C11orf49Q9H6J7 331 aa25.73■■□□□ 1.71
GGA2-204ENST00000563047 RABGAP1Q9Y3P9 1069 aa25.73■■□□□ 1.71
GGA2-204ENST00000563047 MAGEB6P1A0A0J9YX57 407 aa25.72■■□□□ 1.71
GGA2-204ENST00000563047 VCAM1P19320 739 aa25.72■■□□□ 1.71
GGA2-204ENST00000563047 GUCY1A2P33402 732 aa25.72■■□□□ 1.71
GGA2-204ENST00000563047 RGS2P41220 211 aa25.72■■□□□ 1.71
GGA2-204ENST00000563047 USP14P54578 494 aa25.72■■□□□ 1.71
GGA2-204ENST00000563047 TTF1Q15361 905 aaPredicted RBP25.72■■□□□ 1.71
GGA2-204ENST00000563047 ZBED9Q6R2W3 1325 aa25.71■■□□□ 1.71
GGA2-204ENST00000563047 PDE6AP16499 860 aa25.71■■□□□ 1.71
GGA2-204ENST00000563047 EVX2Q03828 476 aa25.71■■□□□ 1.71
GGA2-204ENST00000563047 GABPAQ06546 454 aa25.71■■□□□ 1.71
GGA2-204ENST00000563047 SLC9C2Q5TAH2 1124 aa25.71■■□□□ 1.71
GGA2-204ENST00000563047 APBA2Q99767 749 aa25.71■■□□□ 1.71
GGA2-204ENST00000563047 CABP5Q9NP86 173 aa25.71■■□□□ 1.71
GGA2-204ENST00000563047 NAV1Q8NEY1 1877 aa25.7■■□□□ 1.71
GGA2-204ENST00000563047 SOX1O00570 391 aaPredicted RBP25.7■■□□□ 1.7
GGA2-204ENST00000563047 POLR3DP05423 398 aaPredicted RBP25.7■■□□□ 1.7
GGA2-204ENST00000563047 CCND3P30281 292 aaPredicted RBP25.7■■□□□ 1.7
GGA2-204ENST00000563047 GDF15Q99988 308 aa25.7■■□□□ 1.7
GGA2-204ENST00000563047 ZMYND8Q9ULU4 1186 aaPredicted RBP25.7■■□□□ 1.7
GGA2-204ENST00000563047 PFASO15067 1338 aa25.69■■□□□ 1.7
GGA2-204ENST00000563047 MAP2K5Q13163 448 aa25.69■■□□□ 1.7
GGA2-204ENST00000563047 LHX8Q68G74 356 aa25.69■■□□□ 1.7
GGA2-204ENST00000563047 LBX2Q6XYB7 198 aa25.69■■□□□ 1.7
GGA2-204ENST00000563047 CLASRPQ8N2M8 674 aaKnown RBP25.69■■□□□ 1.7
GGA2-204ENST00000563047 ZNF532Q9HCE3 1301 aa25.68■■□□□ 1.7
GGA2-204ENST00000563047 LAMA3Q16787 3333 aa25.68■■□□□ 1.7
GGA2-204ENST00000563047 APBB1O00213 710 aa25.68■■□□□ 1.7
GGA2-204ENST00000563047 CCNA1P78396 465 aa25.68■■□□□ 1.7
GGA2-204ENST00000563047 SEPT2Q15019 361 aa25.68■■□□□ 1.7
GGA2-204ENST00000563047 SIRT2Q8IXJ6 389 aa25.68■■□□□ 1.7
GGA2-204ENST00000563047 PPIL4Q8WUA2 492 aaKnown RBP eCLIP25.68■■□□□ 1.7
GGA2-204ENST00000563047 KIF1BPQ96EK5 621 aa25.68■■□□□ 1.7
GGA2-204ENST00000563047 CRNKL1Q9BZJ0 848 aaKnown RBP25.68■■□□□ 1.7
GGA2-204ENST00000563047 CWC22Q9HCG8 908 aaKnown RBP25.68■■□□□ 1.7
GGA2-204ENST00000563047 BTBD7Q9P203 1132 aa25.68■■□□□ 1.7
GGA2-204ENST00000563047 TCRBV5S4A2TA0A5A2 114 aa25.67■■□□□ 1.7
GGA2-204ENST00000563047 SPDYE16A6NNV3 312 aaPredicted RBP25.67■■□□□ 1.7
GGA2-204ENST00000563047 GOLIM4O00461 696 aa25.67■■□□□ 1.7
GGA2-204ENST00000563047 BMP8BP34820 402 aa25.67■■□□□ 1.7
GGA2-204ENST00000563047 EDC3Q96F86 508 aaKnown RBP25.67■■□□□ 1.7
GGA2-204ENST00000563047 DNAJC2Q99543 621 aaKnown RBP25.67■■□□□ 1.7
GGA2-204ENST00000563047 RPAP3Q9H6T3 665 aaPredicted RBP25.67■■□□□ 1.7
GGA2-204ENST00000563047 MCM9Q9NXL9 1143 aa25.67■■□□□ 1.7
GGA2-204ENST00000563047 COL6A1P12109 1028 aa25.66■■□□□ 1.7
GGA2-204ENST00000563047 SYN1P17600 705 aa25.66■■□□□ 1.7
GGA2-204ENST00000563047 RPAP2Q8IXW5 612 aaPredicted RBP25.66■■□□□ 1.7
GGA2-204ENST00000563047 LCORLQ8N3X6 602 aa25.66■■□□□ 1.7
GGA2-204ENST00000563047 SDR42E1Q8WUS8 393 aa25.66■■□□□ 1.7
GGA2-204ENST00000563047 LRCH3Q96II8 777 aa25.66■■□□□ 1.7
GGA2-204ENST00000563047 DCP1AQ9NPI6 582 aaPredicted RBP25.66■■□□□ 1.7
GGA2-204ENST00000563047 FLRT1Q9NZU1 646 aa25.66■■□□□ 1.7
GGA2-204ENST00000563047 A0A1W2PRG0 241 aa25.65■■□□□ 1.7
GGA2-204ENST00000563047 SLC15A5A6NIM6 579 aa25.65■■□□□ 1.7
GGA2-204ENST00000563047 IFIT2P09913 472 aaKnown RBP25.65■■□□□ 1.7
GGA2-204ENST00000563047 PTPREP23469 700 aa25.65■■□□□ 1.7
GGA2-204ENST00000563047 WDR78Q5VTH9 848 aa25.65■■□□□ 1.7
GGA2-204ENST00000563047 GLRX3O76003 335 aaKnown RBP25.64■■□□□ 1.7
GGA2-204ENST00000563047 CYP2D6P10635 497 aa25.64■■□□□ 1.7
GGA2-204ENST00000563047 MS4A1P11836 297 aa25.64■■□□□ 1.7
GGA2-204ENST00000563047 DIEXFQ68CQ4 756 aaKnown RBP25.64■■□□□ 1.7
GGA2-204ENST00000563047 ZBTB40Q9NUA8 1239 aa25.64■■□□□ 1.7
GGA2-204ENST00000563047 MPHOSPH10O00566 681 aaKnown RBP25.63■■□□□ 1.69
GGA2-204ENST00000563047 GRB14Q14449 540 aa25.63■■□□□ 1.69
GGA2-204ENST00000563047 BCL11AQ9H165 835 aa25.63■■□□□ 1.69
GGA2-204ENST00000563047 COG6Q9Y2V7 657 aa25.63■■□□□ 1.69
GGA2-204ENST00000563047 HMMRO75330 724 aa25.62■■□□□ 1.69
GGA2-204ENST00000563047 HOXC6P09630 235 aa25.62■■□□□ 1.69
GGA2-204ENST00000563047 MAGEA10P43363 369 aaPredicted RBP25.62■■□□□ 1.69
GGA2-204ENST00000563047 SLFNL1Q499Z3 407 aa25.62■■□□□ 1.69
GGA2-204ENST00000563047 SLC44A5Q8NCS7 719 aa25.62■■□□□ 1.69
GGA2-204ENST00000563047 NPLOC4Q8TAT6 608 aa25.62■■□□□ 1.69
GGA2-204ENST00000563047 ARMT1Q9H993 441 aa25.62■■□□□ 1.69
GGA2-204ENST00000563047 DDX19BQ9UMR2 479 aa25.62■■□□□ 1.69
GGA2-204ENST00000563047 IVNS1ABPQ9Y6Y0 642 aa25.62■■□□□ 1.69
GGA2-204ENST00000563047 FRMPD3Q5JV73 1810 aa25.62■■□□□ 1.69
GGA2-204ENST00000563047 KIAA1755Q5JYT7 1200 aa25.61■■□□□ 1.69
GGA2-204ENST00000563047 MFSD14CQ5VZR4 134 aa25.61■■□□□ 1.69
GGA2-204ENST00000563047 DYNLL2Q96FJ2 89 aa25.61■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms