RNA–Protein interactions for RNA: ENST00000562875.5

KARS-203, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 3

Gene KARS, Length 801 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-203ENST00000562875 ACPPP15309 386 aa9.61□□□□□ -0.87
KARS-203ENST00000562875 MSNP26038 577 aaKnown RBP9.61□□□□□ -0.87
KARS-203ENST00000562875 NASPP49321 788 aaPredicted RBP9.61□□□□□ -0.87
KARS-203ENST00000562875 FGD1P98174 961 aa9.61□□□□□ -0.87
KARS-203ENST00000562875 HSP90AB4PQ58FF6 505 aa9.61□□□□□ -0.87
KARS-203ENST00000562875 PERM1Q5SV97 790 aa9.61□□□□□ -0.87
KARS-203ENST00000562875 ELMSAN1Q6PJG2 1045 aa9.61□□□□□ -0.87
KARS-203ENST00000562875 EPS8L3Q8TE67 593 aaKnown RBP9.61□□□□□ -0.87
KARS-203ENST00000562875 FBF1Q8TES7 1133 aa9.61□□□□□ -0.87
KARS-203ENST00000562875 NLRP2Q9NX02 1062 aa9.61□□□□□ -0.87
KARS-203ENST00000562875 CEP170BQ9Y4F5 1589 aaPredicted RBP9.61□□□□□ -0.87
KARS-203ENST00000562875 SHISA8B8ZZ34 492 aa9.6□□□□□ -0.87
KARS-203ENST00000562875 RAB11FIP3O75154 756 aa9.6□□□□□ -0.87
KARS-203ENST00000562875 GADD45BO75293 160 aaPredicted RBP9.6□□□□□ -0.87
KARS-203ENST00000562875 MX1P20591 662 aa9.6□□□□□ -0.87
KARS-203ENST00000562875 PDE1AP54750 535 aa9.6□□□□□ -0.87
KARS-203ENST00000562875 ATP11AP98196 1134 aa9.6□□□□□ -0.87
KARS-203ENST00000562875 MAP3K10Q02779 954 aa9.6□□□□□ -0.87
KARS-203ENST00000562875 MTHFSDQ2M296 383 aaKnown RBP9.6□□□□□ -0.87
KARS-203ENST00000562875 PEAR1Q5VY43 1037 aaPredicted RBP9.6□□□□□ -0.87
KARS-203ENST00000562875 ZNF385CQ66K41 422 aaPredicted RBP9.6□□□□□ -0.87
KARS-203ENST00000562875 MCTP1Q6DN14 999 aa9.6□□□□□ -0.87
KARS-203ENST00000562875 PSAPL1Q6NUJ1 521 aa9.6□□□□□ -0.87
KARS-203ENST00000562875 PI16Q6UXB8 463 aa9.6□□□□□ -0.87
KARS-203ENST00000562875 THEMISQ8N1K5 641 aaPredicted RBP9.6□□□□□ -0.87
KARS-203ENST00000562875 NAP1L5Q96NT1 182 aaPredicted RBP9.6□□□□□ -0.87
KARS-203ENST00000562875 DUSP9Q99956 384 aaKnown RBP9.6□□□□□ -0.87
KARS-203ENST00000562875 LRRC4BQ9NT99 713 aa9.6□□□□□ -0.87
KARS-203ENST00000562875 SETD1BQ9UPS6 1966 aaKnown RBP9.59□□□□□ -0.87
KARS-203ENST00000562875 ADGRL3Q9HAR2 1447 aa9.59□□□□□ -0.87
KARS-203ENST00000562875 ZNF142P52746 1687 aaPredicted RBP9.59□□□□□ -0.87
KARS-203ENST00000562875 RBM47A0AV96 593 aaKnown RBP9.59□□□□□ -0.87
KARS-203ENST00000562875 SMARCA5O60264 1052 aaPredicted RBP9.59□□□□□ -0.87
KARS-203ENST00000562875 UBTFL1P0CB47 393 aaPredicted RBP9.59□□□□□ -0.87
KARS-203ENST00000562875 ZNF16P17020 682 aaPredicted RBP9.59□□□□□ -0.87
KARS-203ENST00000562875 AMPD1P23109 780 aa9.59□□□□□ -0.87
KARS-203ENST00000562875 ATP8B2P98198 1209 aa9.59□□□□□ -0.87
KARS-203ENST00000562875 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.59□□□□□ -0.87
KARS-203ENST00000562875 CHSY3Q70JA7 882 aa9.59□□□□□ -0.87
KARS-203ENST00000562875 MICALL1Q8N3F8 863 aa9.59□□□□□ -0.87
KARS-203ENST00000562875 SVOPQ8N4V2 548 aa9.59□□□□□ -0.87
KARS-203ENST00000562875 NUDT8Q8WV74 236 aa9.59□□□□□ -0.87
KARS-203ENST00000562875 PLD4Q96BZ4 506 aa9.59□□□□□ -0.87
KARS-203ENST00000562875 BTBD6Q96KE9 485 aa9.59□□□□□ -0.87
KARS-203ENST00000562875 OSMRQ99650 979 aa9.59□□□□□ -0.87
KARS-203ENST00000562875 LPIN3Q9BQK8 851 aa9.59□□□□□ -0.87
KARS-203ENST00000562875 SMG9Q9H0W8 520 aaKnown RBP9.59□□□□□ -0.87
KARS-203ENST00000562875 RASSF4Q9H2L5 321 aa9.59□□□□□ -0.87
KARS-203ENST00000562875 STARD13Q9Y3M8 1113 aa9.59□□□□□ -0.87
KARS-203ENST00000562875 RGPD2P0DJD1 1756 aa9.58□□□□□ -0.88
KARS-203ENST00000562875 A0A1W2PP55 124 aa9.58□□□□□ -0.88
KARS-203ENST00000562875 TRPA1O75762 1119 aa9.58□□□□□ -0.88
KARS-203ENST00000562875 HOXB7P09629 217 aa9.58□□□□□ -0.88
KARS-203ENST00000562875 ZNF445P59923 1031 aa9.58□□□□□ -0.88
KARS-203ENST00000562875 TAF7Q15545 349 aaPredicted RBP9.58□□□□□ -0.88
KARS-203ENST00000562875 GLIPR1L2Q4G1C9 344 aa9.58□□□□□ -0.88
KARS-203ENST00000562875 RILPL2Q969X0 211 aa9.58□□□□□ -0.88
KARS-203ENST00000562875 INTS4Q96HW7 963 aaKnown RBP9.58□□□□□ -0.88
KARS-203ENST00000562875 GPATCH3Q96I76 525 aa9.58□□□□□ -0.88
KARS-203ENST00000562875 ZKSCAN3Q9BRR0 538 aa9.58□□□□□ -0.88
KARS-203ENST00000562875 PBX4Q9BYU1 374 aa9.58□□□□□ -0.88
KARS-203ENST00000562875 EHD4Q9H223 541 aa9.58□□□□□ -0.88
KARS-203ENST00000562875 RNF19AQ9NV58 838 aa9.58□□□□□ -0.88
KARS-203ENST00000562875 DZANK1Q9NVP4 752 aa9.58□□□□□ -0.88
KARS-203ENST00000562875 FRRS1LQ9P0K9 344 aa9.58□□□□□ -0.88
KARS-203ENST00000562875 NCAPD2Q15021 1401 aa9.57□□□□□ -0.88
KARS-203ENST00000562875 CRYBG1Q9Y4K1 1723 aa9.57□□□□□ -0.88
KARS-203ENST00000562875 RGS9O75916 674 aaPredicted RBP9.57□□□□□ -0.88
KARS-203ENST00000562875 ALBP02768 609 aa9.57□□□□□ -0.88
KARS-203ENST00000562875 NEK4P51957 841 aa9.57□□□□□ -0.88
KARS-203ENST00000562875 XPCQ01831 940 aaPredicted RBP9.57□□□□□ -0.88
KARS-203ENST00000562875 KRT24Q2M2I5 525 aa9.57□□□□□ -0.88
KARS-203ENST00000562875 HS1BP3Q53T59 392 aa9.57□□□□□ -0.88
KARS-203ENST00000562875 KIAA0319Q5VV43 1072 aa9.57□□□□□ -0.88
KARS-203ENST00000562875 CEP135Q66GS9 1140 aa9.57□□□□□ -0.88
KARS-203ENST00000562875 KIAA1211Q6ZU35 1233 aa9.57□□□□□ -0.88
KARS-203ENST00000562875 C16orf71Q8IYS4 520 aaPredicted RBP9.57□□□□□ -0.88
KARS-203ENST00000562875 CNTROBQ8N137 903 aa9.57□□□□□ -0.88
KARS-203ENST00000562875 PANK2Q9BZ23 570 aa9.57□□□□□ -0.88
KARS-203ENST00000562875 RRAGDQ9NQL2 400 aaPredicted RBP9.57□□□□□ -0.88
KARS-203ENST00000562875 PARP2Q9UGN5 583 aa9.57□□□□□ -0.88
KARS-203ENST00000562875 KIF1AQ12756 1690 aa9.56□□□□□ -0.88
KARS-203ENST00000562875 MED1Q15648 1581 aaPredicted RBP9.56□□□□□ -0.88
KARS-203ENST00000562875 SMNDC1O75940 238 aaKnown RBP eCLIP9.56□□□□□ -0.88
KARS-203ENST00000562875 HOXC9P31274 260 aa9.56□□□□□ -0.88
KARS-203ENST00000562875 KANK3Q6NY19 840 aa9.56□□□□□ -0.88
KARS-203ENST00000562875 NEDD1Q8NHV4 660 aa9.56□□□□□ -0.88
KARS-203ENST00000562875 RUFY2Q8WXA3 655 aa9.56□□□□□ -0.88
KARS-203ENST00000562875 HHIPQ96QV1 700 aa9.56□□□□□ -0.88
KARS-203ENST00000562875 SLC26A8Q96RN1 970 aa9.56□□□□□ -0.88
KARS-203ENST00000562875 SUV39H2Q9H5I1 410 aa9.56□□□□□ -0.88
KARS-203ENST00000562875 JPH1Q9HDC5 661 aaPredicted RBP9.56□□□□□ -0.88
KARS-203ENST00000562875 ENAMQ9NRM1 1142 aa9.56□□□□□ -0.88
KARS-203ENST00000562875 SPG7Q9UQ90 795 aa9.56□□□□□ -0.88
KARS-203ENST00000562875 EXOC6BQ9Y2D4 811 aa9.56□□□□□ -0.88
KARS-203ENST00000562875 AFDNP55196 1824 aaKnown RBP9.56□□□□□ -0.88
KARS-203ENST00000562875 OVOS2A0A0G2JMS6 1433 aa9.56□□□□□ -0.88
KARS-203ENST00000562875 SIPA1L3O60292 1781 aaPredicted RBP9.55□□□□□ -0.88
KARS-203ENST00000562875 NWD1Q149M9 1564 aa9.55□□□□□ -0.88
KARS-203ENST00000562875 F6X3S4 739 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms