RNA–Protein interactions for RNA: ENST00000562836.5

CDH1-205, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 2,759 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-205ENST00000562836 CABP7Q86V35 215 aa10.51□□□□□ -0.73
CDH1-205ENST00000562836 PAF1Q8N7H5 531 aa10.51□□□□□ -0.73
CDH1-205ENST00000562836 TBC1D20Q96BZ9 403 aa10.51□□□□□ -0.73
CDH1-205ENST00000562836 CCT7Q99832 543 aa10.51□□□□□ -0.73
CDH1-205ENST00000562836 QTRT2Q9H974 415 aaKnown RBP10.51□□□□□ -0.73
CDH1-205ENST00000562836 ARHGAP31Q2M1Z3 1444 aa10.51□□□□□ -0.73
CDH1-205ENST00000562836 LRRIQ1Q96JM4 1722 aa10.5□□□□□ -0.73
CDH1-205ENST00000562836 GOLGA6L9A6NEM1 432 aa10.5□□□□□ -0.73
CDH1-205ENST00000562836 ZSCAN12O43309 604 aa10.5□□□□□ -0.73
CDH1-205ENST00000562836 MGEA5O60502 916 aa10.5□□□□□ -0.73
CDH1-205ENST00000562836 KCNJ13O60928 360 aa10.5□□□□□ -0.73
CDH1-205ENST00000562836 KRT14P02533 472 aa10.5□□□□□ -0.73
CDH1-205ENST00000562836 BTF3P20290 206 aaKnown RBP10.5□□□□□ -0.73
CDH1-205ENST00000562836 CCNCP24863 283 aa10.5□□□□□ -0.73
CDH1-205ENST00000562836 SIM2Q14190 667 aaPredicted RBP10.5□□□□□ -0.73
CDH1-205ENST00000562836 WASHC4Q2M389 1173 aa10.5□□□□□ -0.73
CDH1-205ENST00000562836 PABPC1LQ4VXU2 614 aaKnown RBP10.5□□□□□ -0.73
CDH1-205ENST00000562836 CNNM3Q8NE01 707 aa10.5□□□□□ -0.73
CDH1-205ENST00000562836 DHX38Q92620 1227 aaKnown RBP10.5□□□□□ -0.73
CDH1-205ENST00000562836 SH3KBP1Q96B97 665 aa10.5□□□□□ -0.73
CDH1-205ENST00000562836 ABHD8Q96I13 439 aa10.5□□□□□ -0.73
CDH1-205ENST00000562836 RNPC3Q96LT9 517 aaKnown RBP10.5□□□□□ -0.73
CDH1-205ENST00000562836 ANO10Q9NW15 660 aa10.5□□□□□ -0.73
CDH1-205ENST00000562836 HESX1Q9UBX0 185 aa10.5□□□□□ -0.73
CDH1-205ENST00000562836 ZNF180Q9UJW8 692 aa10.5□□□□□ -0.73
CDH1-205ENST00000562836 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.5□□□□□ -0.73
CDH1-205ENST00000562836 UPP2O95045 317 aa10.5□□□□□ -0.73
CDH1-205ENST00000562836 HOXC13P31276 330 aa10.5□□□□□ -0.73
CDH1-205ENST00000562836 CENPAP49450 140 aa10.5□□□□□ -0.73
CDH1-205ENST00000562836 PCGF5Q86SE9 256 aa10.5□□□□□ -0.73
CDH1-205ENST00000562836 RAB11FIP4Q86YS3 637 aa10.5□□□□□ -0.73
CDH1-205ENST00000562836 CCDC50Q8IVM0 306 aa10.5□□□□□ -0.73
CDH1-205ENST00000562836 CEP112Q8N8E3 955 aa10.5□□□□□ -0.73
CDH1-205ENST00000562836 PIDD1Q9HB75 910 aa10.5□□□□□ -0.73
CDH1-205ENST00000562836 STK39Q9UEW8 545 aa10.5□□□□□ -0.73
CDH1-205ENST00000562836 TMA7Q9Y2S6 64 aaKnown RBP10.5□□□□□ -0.73
CDH1-205ENST00000562836 RTEL1-TNFRSF6BF6WH68 1400 aa10.5□□□□□ -0.73
CDH1-205ENST00000562836 HTR3EA5X5Y0 456 aa10.49□□□□□ -0.73
CDH1-205ENST00000562836 BCRP11274 1271 aa10.49□□□□□ -0.73
CDH1-205ENST00000562836 TSPAN7P41732 249 aa10.49□□□□□ -0.73
CDH1-205ENST00000562836 RCAN1P53805 252 aa10.49□□□□□ -0.73
CDH1-205ENST00000562836 PTPN14Q15678 1187 aa10.49□□□□□ -0.73
CDH1-205ENST00000562836 SNCBQ16143 134 aa10.49□□□□□ -0.73
CDH1-205ENST00000562836 ACCSLQ4AC99 568 aa10.49□□□□□ -0.73
CDH1-205ENST00000562836 ADALQ6DHV7 355 aa10.49□□□□□ -0.73
CDH1-205ENST00000562836 DAAM2Q86T65 1068 aa10.49□□□□□ -0.73
CDH1-205ENST00000562836 C8orf48Q96LL4 319 aa10.49□□□□□ -0.73
CDH1-205ENST00000562836 ATAD3AQ9NVI7 634 aa10.49□□□□□ -0.73
CDH1-205ENST00000562836 ORC3Q9UBD5 711 aaPredicted RBP10.49□□□□□ -0.73
CDH1-205ENST00000562836 ACAD8Q9UKU7 415 aa10.49□□□□□ -0.73
CDH1-205ENST00000562836 DNMBPQ6XZF7 1577 aa10.49□□□□□ -0.73
CDH1-205ENST00000562836 GOLGA6L10A0A0M3HER8 536 aa10.49□□□□□ -0.73
CDH1-205ENST00000562836 STXBP3O00186 592 aa10.49□□□□□ -0.73
CDH1-205ENST00000562836 RASA4O43374 803 aa10.49□□□□□ -0.73
CDH1-205ENST00000562836 TROVE2P10155 538 aaKnown RBP eCLIP10.49□□□□□ -0.73
CDH1-205ENST00000562836 ADD2P35612 726 aa10.49□□□□□ -0.73
CDH1-205ENST00000562836 SKIV2L2P42285 1042 aaKnown RBP10.49□□□□□ -0.73
CDH1-205ENST00000562836 ZBTB17Q13105 803 aa10.49□□□□□ -0.73
CDH1-205ENST00000562836 SEPT7Q16181 437 aaKnown RBP10.49□□□□□ -0.73
CDH1-205ENST00000562836 INAQ16352 499 aa10.49□□□□□ -0.73
CDH1-205ENST00000562836 PCSK7Q16549 785 aa10.49□□□□□ -0.73
CDH1-205ENST00000562836 GKAP1Q5VSY0 366 aaPredicted RBP10.49□□□□□ -0.73
CDH1-205ENST00000562836 IPCEF1Q8WWN9 437 aaPredicted RBP10.49□□□□□ -0.73
CDH1-205ENST00000562836 HOOK2Q96ED9 719 aa10.49□□□□□ -0.73
CDH1-205ENST00000562836 FUT8Q9BYC5 575 aa10.49□□□□□ -0.73
CDH1-205ENST00000562836 INIPQ9NRY2 104 aa10.49□□□□□ -0.73
CDH1-205ENST00000562836 SEPT10Q9P0V9 454 aa10.49□□□□□ -0.73
CDH1-205ENST00000562836 XPO7Q9UIA9 1087 aaKnown RBP10.49□□□□□ -0.73
CDH1-205ENST00000562836 C2CD2Q9Y426 696 aa10.49□□□□□ -0.73
CDH1-205ENST00000562836 PAHP00439 452 aa10.48□□□□□ -0.73
CDH1-205ENST00000562836 ATP4AP20648 1035 aa10.48□□□□□ -0.73
CDH1-205ENST00000562836 MAP7Q14244 749 aa10.48□□□□□ -0.73
CDH1-205ENST00000562836 SLC16A10Q8TF71 515 aa10.48□□□□□ -0.73
CDH1-205ENST00000562836 CACTINQ8WUQ7 758 aaKnown RBP10.48□□□□□ -0.73
CDH1-205ENST00000562836 DISC1Q9NRI5 854 aa10.48□□□□□ -0.73
CDH1-205ENST00000562836 SPATA31E1Q6ZUB1 1445 aa10.48□□□□□ -0.73
CDH1-205ENST00000562836 POTEFA5A3E0 1075 aa10.48□□□□□ -0.73
CDH1-205ENST00000562836 CHL1O00533 1208 aa10.48□□□□□ -0.73
CDH1-205ENST00000562836 SRGAP3O43295 1099 aa10.48□□□□□ -0.73
CDH1-205ENST00000562836 FBXO21O94952 628 aa10.48□□□□□ -0.73
CDH1-205ENST00000562836 CLTAP09496 248 aa10.48□□□□□ -0.73
CDH1-205ENST00000562836 MRPL28Q13084 256 aaKnown RBP10.48□□□□□ -0.73
CDH1-205ENST00000562836 LRRFIP1Q32MZ4 808 aaKnown RBP10.48□□□□□ -0.73
CDH1-205ENST00000562836 BBS9Q3SYG4 887 aa10.48□□□□□ -0.73
CDH1-205ENST00000562836 NPLOC4Q8TAT6 608 aa10.48□□□□□ -0.73
CDH1-205ENST00000562836 L3MBTL2Q969R5 705 aa10.48□□□□□ -0.73
CDH1-205ENST00000562836 LRRC45Q96CN5 670 aa10.48□□□□□ -0.73
CDH1-205ENST00000562836 MAML3Q96JK9 1138 aa10.48□□□□□ -0.73
CDH1-205ENST00000562836 SPACA7Q96KW9 195 aa10.48□□□□□ -0.73
CDH1-205ENST00000562836 ATXN10Q9UBB4 475 aa10.48□□□□□ -0.73
CDH1-205ENST00000562836 KIF7Q2M1P5 1343 aa10.48□□□□□ -0.73
CDH1-205ENST00000562836 PLEKHH1Q9ULM0 1364 aa10.48□□□□□ -0.73
CDH1-205ENST00000562836 GOLGA6L7A0A1B0GV03 622 aa10.48□□□□□ -0.73
CDH1-205ENST00000562836 TARSL2A2RTX5 802 aaKnown RBP10.48□□□□□ -0.73
CDH1-205ENST00000562836 TMEM232C9JQI7 657 aa10.48□□□□□ -0.73
CDH1-205ENST00000562836 S100A5P33763 92 aa10.48□□□□□ -0.73
CDH1-205ENST00000562836 CTCFP49711 727 aaPredicted RBP10.48□□□□□ -0.73
CDH1-205ENST00000562836 TAF1CQ15572 869 aaPredicted RBP10.48□□□□□ -0.73
CDH1-205ENST00000562836 FRS2Q8WU20 508 aa10.48□□□□□ -0.73
CDH1-205ENST00000562836 LPIN2Q92539 896 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms