RNA–Protein interactions for RNA: ENST00000562707.5

CMTM3-205, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CMTM3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-205ENST00000562707 CABP5Q9NP86 173 aa20.19■□□□□ 0.82
CMTM3-205ENST00000562707 MAP2K5Q13163 448 aa20.18■□□□□ 0.82
CMTM3-205ENST00000562707 CCL14Q16627 93 aa20.18■□□□□ 0.82
CMTM3-205ENST00000562707 ABCB5Q2M3G0 1257 aa20.18■□□□□ 0.82
CMTM3-205ENST00000562707 WDR78Q5VTH9 848 aa20.18■□□□□ 0.82
CMTM3-205ENST00000562707 EDC3Q96F86 508 aaKnown RBP20.18■□□□□ 0.82
CMTM3-205ENST00000562707 KIAA1683Q9H0B3 1180 aa20.18■□□□□ 0.82
CMTM3-205ENST00000562707 CCND3P30281 292 aaPredicted RBP20.17■□□□□ 0.82
CMTM3-205ENST00000562707 MFSD14CQ5VZR4 134 aa20.17■□□□□ 0.82
CMTM3-205ENST00000562707 POTEEQ6S8J3 1075 aa20.17■□□□□ 0.82
CMTM3-205ENST00000562707 CATSPERGQ6ZRH7 1159 aa20.17■□□□□ 0.82
CMTM3-205ENST00000562707 ERC1Q8IUD2 1116 aa20.17■□□□□ 0.82
CMTM3-205ENST00000562707 SZT2Q5T011 3432 aa20.16■□□□□ 0.82
CMTM3-205ENST00000562707 MAGEA10P43363 369 aaPredicted RBP20.16■□□□□ 0.82
CMTM3-205ENST00000562707 LHX8Q68G74 356 aa20.16■□□□□ 0.82
CMTM3-205ENST00000562707 GPR153Q6NV75 609 aa20.16■□□□□ 0.82
CMTM3-205ENST00000562707 AACSQ86V21 672 aa20.16■□□□□ 0.82
CMTM3-205ENST00000562707 ANTXR1Q9H6X2 564 aa20.16■□□□□ 0.82
CMTM3-205ENST00000562707 NDUFB9Q9Y6M9 179 aa20.16■□□□□ 0.82
CMTM3-205ENST00000562707 PFASO15067 1338 aa20.16■□□□□ 0.82
CMTM3-205ENST00000562707 ATAD5Q96QE3 1844 aa20.16■□□□□ 0.82
CMTM3-205ENST00000562707 CNMDO75829 334 aa20.15■□□□□ 0.82
CMTM3-205ENST00000562707 POLR3DP05423 398 aaPredicted RBP20.15■□□□□ 0.82
CMTM3-205ENST00000562707 COL6A1P12109 1028 aa20.15■□□□□ 0.82
CMTM3-205ENST00000562707 PTPREP23469 700 aa20.15■□□□□ 0.82
CMTM3-205ENST00000562707 TDHQ8IZJ6 230 aa20.15■□□□□ 0.82
CMTM3-205ENST00000562707 ACER1Q8TDN7 264 aa20.15■□□□□ 0.82
CMTM3-205ENST00000562707 UBE2OQ9C0C9 1292 aaKnown RBP20.15■□□□□ 0.82
CMTM3-205ENST00000562707 IVNS1ABPQ9Y6Y0 642 aa20.15■□□□□ 0.82
CMTM3-205ENST00000562707 DOCK3Q8IZD9 2030 aa20.15■□□□□ 0.82
CMTM3-205ENST00000562707 MAST2Q6P0Q8 1798 aa20.14■□□□□ 0.81
CMTM3-205ENST00000562707 SLC15A5A6NIM6 579 aa20.14■□□□□ 0.81
CMTM3-205ENST00000562707 VCAM1P19320 739 aa20.14■□□□□ 0.81
CMTM3-205ENST00000562707 ATP2B2Q01814 1243 aa20.14■□□□□ 0.81
CMTM3-205ENST00000562707 TTF1Q15361 905 aaPredicted RBP20.14■□□□□ 0.81
CMTM3-205ENST00000562707 LRIT3Q3SXY7 679 aa20.14■□□□□ 0.81
CMTM3-205ENST00000562707 CEP85Q6P2H3 762 aa20.14■□□□□ 0.81
CMTM3-205ENST00000562707 SIPA1L1O43166 1804 aa20.13■□□□□ 0.81
CMTM3-205ENST00000562707 MAGEB6P1A0A0J9YX57 407 aa20.13■□□□□ 0.81
CMTM3-205ENST00000562707 RLBP1P12271 317 aa20.13■□□□□ 0.81
CMTM3-205ENST00000562707 PLCD1P51178 756 aa20.13■□□□□ 0.81
CMTM3-205ENST00000562707 HSP90AB4PQ58FF6 505 aa20.13■□□□□ 0.81
CMTM3-205ENST00000562707 LBX2Q6XYB7 198 aa20.13■□□□□ 0.81
CMTM3-205ENST00000562707 RIOK1Q9BRS2 568 aaKnown RBP20.13■□□□□ 0.81
CMTM3-205ENST00000562707 CRNKL1Q9BZJ0 848 aaKnown RBP20.13■□□□□ 0.81
CMTM3-205ENST00000562707 RPAP3Q9H6T3 665 aaPredicted RBP20.13■□□□□ 0.81
CMTM3-205ENST00000562707 EXOC6BQ9Y2D4 811 aa20.13■□□□□ 0.81
CMTM3-205ENST00000562707 CNGA1P29973 690 aa20.12■□□□□ 0.81
CMTM3-205ENST00000562707 SHMT1P34896 483 aa20.12■□□□□ 0.81
CMTM3-205ENST00000562707 HNRNPUQ00839 825 aaKnown RBP eCLIP20.12■□□□□ 0.81
CMTM3-205ENST00000562707 LRRC26Q2I0M4 334 aa20.12■□□□□ 0.81
CMTM3-205ENST00000562707 DEFB123Q8N688 67 aa20.12■□□□□ 0.81
CMTM3-205ENST00000562707 BTBD7Q9P203 1132 aa20.12■□□□□ 0.81
CMTM3-205ENST00000562707 DLL1O00548 723 aa20.11■□□□□ 0.81
CMTM3-205ENST00000562707 MPHOSPH10O00566 681 aaKnown RBP20.11■□□□□ 0.81
CMTM3-205ENST00000562707 MSCO60682 206 aa20.11■□□□□ 0.81
CMTM3-205ENST00000562707 HOXC6P09630 235 aa20.11■□□□□ 0.81
CMTM3-205ENST00000562707 SLC9C2Q5TAH2 1124 aa20.11■□□□□ 0.81
CMTM3-205ENST00000562707 MCM9Q9NXL9 1143 aa20.11■□□□□ 0.81
CMTM3-205ENST00000562707 HOXC10Q9NYD6 342 aa20.11■□□□□ 0.81
CMTM3-205ENST00000562707 FLRT1Q9NZU1 646 aa20.11■□□□□ 0.81
CMTM3-205ENST00000562707 SPDYE16A6NNV3 312 aaPredicted RBP20.1■□□□□ 0.81
CMTM3-205ENST00000562707 GRB14Q14449 540 aa20.1■□□□□ 0.81
CMTM3-205ENST00000562707 SEPT2Q15019 361 aa20.1■□□□□ 0.81
CMTM3-205ENST00000562707 SENP6Q9GZR1 1112 aaPredicted RBP20.1■□□□□ 0.81
CMTM3-205ENST00000562707 IL1RAPL2Q9NP60 686 aa20.1■□□□□ 0.81
CMTM3-205ENST00000562707 DDX20Q9UHI6 824 aaKnown RBP20.1■□□□□ 0.81
CMTM3-205ENST00000562707 PLXNB2O15031 1838 aa20.09■□□□□ 0.81
CMTM3-205ENST00000562707 GUCY1A2P33402 732 aa20.09■□□□□ 0.81
CMTM3-205ENST00000562707 GABPAQ06546 454 aa20.09■□□□□ 0.81
CMTM3-205ENST00000562707 COG2Q14746 738 aa20.09■□□□□ 0.81
CMTM3-205ENST00000562707 DPP9Q86TI2 863 aa20.09■□□□□ 0.81
CMTM3-205ENST00000562707 LPAR1Q92633 364 aa20.09■□□□□ 0.81
CMTM3-205ENST00000562707 DDX60LQ5H9U9 1706 aaKnown RBP20.08■□□□□ 0.81
CMTM3-205ENST00000562707 STRNO43815 780 aa20.08■□□□□ 0.81
CMTM3-205ENST00000562707 PDE6AP16499 860 aa20.08■□□□□ 0.81
CMTM3-205ENST00000562707 CYP2C19P33261 490 aa20.08■□□□□ 0.81
CMTM3-205ENST00000562707 MDM2Q00987 491 aaPredicted RBP20.08■□□□□ 0.81
CMTM3-205ENST00000562707 CLASRPQ8N2M8 674 aaKnown RBP20.08■□□□□ 0.81
CMTM3-205ENST00000562707 NPLOC4Q8TAT6 608 aa20.08■□□□□ 0.81
CMTM3-205ENST00000562707 RHPN1Q8TCX5 695 aa20.08■□□□□ 0.81
CMTM3-205ENST00000562707 LBHD1Q9BQE6 289 aaPredicted RBP20.08■□□□□ 0.81
CMTM3-205ENST00000562707 Q7L0L9 218 aa20.07■□□□□ 0.8
CMTM3-205ENST00000562707 TANGO6Q9C0B7 1094 aa20.07■□□□□ 0.8
CMTM3-205ENST00000562707 ZNF532Q9HCE3 1301 aa20.06■□□□□ 0.8
CMTM3-205ENST00000562707 A0A1W2PRG0 241 aa20.06■□□□□ 0.8
CMTM3-205ENST00000562707 DNM1LO00429 736 aa20.06■□□□□ 0.8
CMTM3-205ENST00000562707 GOLIM4O00461 696 aa20.06■□□□□ 0.8
CMTM3-205ENST00000562707 IFIT2P09913 472 aaKnown RBP20.06■□□□□ 0.8
CMTM3-205ENST00000562707 TMEM179Q6ZVK1 233 aa20.06■□□□□ 0.8
CMTM3-205ENST00000562707 ARRDC4Q8NCT1 418 aa20.06■□□□□ 0.8
CMTM3-205ENST00000562707 PANK1Q8TE04 598 aa20.06■□□□□ 0.8
CMTM3-205ENST00000562707 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.06■□□□□ 0.8
CMTM3-205ENST00000562707 KIF1BPQ96EK5 621 aa20.06■□□□□ 0.8
CMTM3-205ENST00000562707 DNAJC2Q99543 621 aaKnown RBP20.06■□□□□ 0.8
CMTM3-205ENST00000562707 MOV10L1Q9BXT6 1211 aaKnown RBP20.06■□□□□ 0.8
CMTM3-205ENST00000562707 SWAP70Q9UH65 585 aa20.06■□□□□ 0.8
CMTM3-205ENST00000562707 STXBP5LQ9Y2K9 1186 aa20.06■□□□□ 0.8
CMTM3-205ENST00000562707 MS4A1P11836 297 aa20.05■□□□□ 0.8
CMTM3-205ENST00000562707 ADORA2AP29274 412 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms