RNA–Protein interactions for RNA: ENST00000562540.1

DENND4A-205, Transcript of DENN domain containing 4A, humanhuman

TSL 2

Gene DENND4A, Length 629 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4A-205ENST00000562540 TMPRSS7Q7RTY8 843 aa6.13□□□□□ -1.43
DENND4A-205ENST00000562540 MYLIPQ8WY64 445 aa6.13□□□□□ -1.43
DENND4A-205ENST00000562540 PARD6AQ9NPB6 346 aa6.13□□□□□ -1.43
DENND4A-205ENST00000562540 TMEM59LQ9UK28 342 aa6.13□□□□□ -1.43
DENND4A-205ENST00000562540 TTF2Q9UNY4 1162 aaKnown RBP6.13□□□□□ -1.43
DENND4A-205ENST00000562540 FOXD2O60548 495 aaPredicted RBP6.12□□□□□ -1.43
DENND4A-205ENST00000562540 GLDCP23378 1020 aa6.12□□□□□ -1.43
DENND4A-205ENST00000562540 TTBK2Q6IQ55 1244 aa6.12□□□□□ -1.43
DENND4A-205ENST00000562540 SV2BQ7L1I2 683 aa6.12□□□□□ -1.43
DENND4A-205ENST00000562540 ZSCAN29Q8IWY8 852 aaPredicted RBP6.12□□□□□ -1.43
DENND4A-205ENST00000562540 WWC3Q9ULE0 1092 aa6.12□□□□□ -1.43
DENND4A-205ENST00000562540 ESR1P03372 595 aa6.11□□□□□ -1.43
DENND4A-205ENST00000562540 LMNB1P20700 586 aa6.11□□□□□ -1.43
DENND4A-205ENST00000562540 ERVFC1P60507 584 aa6.11□□□□□ -1.43
DENND4A-205ENST00000562540 DBX2Q6ZNG2 339 aa6.11□□□□□ -1.43
DENND4A-205ENST00000562540 CDH24Q86UP0 819 aa6.11□□□□□ -1.43
DENND4A-205ENST00000562540 PIWIL2Q8TC59 973 aaKnown RBP6.11□□□□□ -1.43
DENND4A-205ENST00000562540 SLC26A8Q96RN1 970 aa6.11□□□□□ -1.43
DENND4A-205ENST00000562540 DPH2Q9BQC3 489 aaPredicted RBP6.11□□□□□ -1.43
DENND4A-205ENST00000562540 IRF2BPLQ9H1B7 796 aa6.11□□□□□ -1.43
DENND4A-205ENST00000562540 RBAK-RBAKDNI3L0D1 243 aa6.1□□□□□ -1.43
DENND4A-205ENST00000562540 HPXP02790 462 aa6.1□□□□□ -1.43
DENND4A-205ENST00000562540 ETV3P41162 512 aa6.1□□□□□ -1.43
DENND4A-205ENST00000562540 SEPT6Q14141 434 aa6.1□□□□□ -1.43
DENND4A-205ENST00000562540 CREG2Q8IUH2 290 aa6.1□□□□□ -1.43
DENND4A-205ENST00000562540 PGRP06401 933 aa6.09□□□□□ -1.43
DENND4A-205ENST00000562540 BMP7P18075 431 aa6.09□□□□□ -1.43
DENND4A-205ENST00000562540 KCNN1Q92952 543 aa6.09□□□□□ -1.43
DENND4A-205ENST00000562540 ADAMTS10Q9H324 1103 aa6.09□□□□□ -1.43
DENND4A-205ENST00000562540 TJP2Q9UDY2 1190 aa6.09□□□□□ -1.43
DENND4A-205ENST00000562540 TRHRP34981 398 aaPredicted RBP6.08□□□□□ -1.44
DENND4A-205ENST00000562540 RPS26P62854 115 aaKnown RBP6.08□□□□□ -1.44
DENND4A-205ENST00000562540 GGNQ86UU5 652 aa6.08□□□□□ -1.44
DENND4A-205ENST00000562540 MRPL41Q8IXM3 137 aaKnown RBP6.08□□□□□ -1.44
DENND4A-205ENST00000562540 TMEM87BQ96K49 555 aa6.08□□□□□ -1.44
DENND4A-205ENST00000562540 ASB16Q96NS5 453 aa6.08□□□□□ -1.44
DENND4A-205ENST00000562540 RNF32Q9H0A6 362 aa6.08□□□□□ -1.44
DENND4A-205ENST00000562540 TRIT1Q9H3H1 467 aaKnown RBP6.08□□□□□ -1.44
DENND4A-205ENST00000562540 ZCCHC4Q9H5U6 513 aa6.08□□□□□ -1.44
DENND4A-205ENST00000562540 TACC3Q9Y6A5 838 aa6.08□□□□□ -1.44
DENND4A-205ENST00000562540 WASH4PA8MWX3 477 aa6.07□□□□□ -1.44
DENND4A-205ENST00000562540 GFRA2O00451 464 aa6.07□□□□□ -1.44
DENND4A-205ENST00000562540 TPP2P29144 1249 aaPredicted RBP6.07□□□□□ -1.44
DENND4A-205ENST00000562540 CCDC85BQ15834 202 aaPredicted RBP6.07□□□□□ -1.44
DENND4A-205ENST00000562540 Q96M66 194 aa6.07□□□□□ -1.44
DENND4A-205ENST00000562540 PCDHB5Q9Y5E4 795 aa6.07□□□□□ -1.44
DENND4A-205ENST00000562540 BRD1O95696 1058 aa6.06□□□□□ -1.44
DENND4A-205ENST00000562540 SRFP11831 508 aa6.06□□□□□ -1.44
DENND4A-205ENST00000562540 SYN1P17600 705 aa6.06□□□□□ -1.44
DENND4A-205ENST00000562540 SLC6A19Q695T7 634 aa6.06□□□□□ -1.44
DENND4A-205ENST00000562540 GPATCH2Q9NW75 528 aa6.06□□□□□ -1.44
DENND4A-205ENST00000562540 DUSP13Q9UII6 198 aa6.06□□□□□ -1.44
DENND4A-205ENST00000562540 LDHBP07195 334 aaKnown RBP6.05□□□□□ -1.44
DENND4A-205ENST00000562540 P4HBP07237 508 aaKnown RBP6.05□□□□□ -1.44
DENND4A-205ENST00000562540 EIF4BP23588 611 aaKnown RBP6.05□□□□□ -1.44
DENND4A-205ENST00000562540 NFKB2Q00653 900 aa6.05□□□□□ -1.44
DENND4A-205ENST00000562540 EGR3Q06889 387 aa6.05□□□□□ -1.44
DENND4A-205ENST00000562540 PDE4BQ07343 736 aa6.05□□□□□ -1.44
DENND4A-205ENST00000562540 GAB4Q2WGN9 574 aa6.05□□□□□ -1.44
DENND4A-205ENST00000562540 PDZD8Q8NEN9 1154 aa6.05□□□□□ -1.44
DENND4A-205ENST00000562540 DNAJB8Q8NHS0 232 aa6.05□□□□□ -1.44
DENND4A-205ENST00000562540 FRMD6Q96NE9 622 aa6.05□□□□□ -1.44
DENND4A-205ENST00000562540 KCNC2Q96PR1 638 aa6.05□□□□□ -1.44
DENND4A-205ENST00000562540 DUSP15Q9H1R2 295 aaPredicted RBP6.05□□□□□ -1.44
DENND4A-205ENST00000562540 SLC6A17Q9H1V8 727 aa6.05□□□□□ -1.44
DENND4A-205ENST00000562540 C19orf44Q9H6X5 657 aa6.05□□□□□ -1.44
DENND4A-205ENST00000562540 ADAMTS20P59510 1910 aa6.05□□□□□ -1.44
DENND4A-205ENST00000562540 LTKP29376 864 aa6.04□□□□□ -1.44
DENND4A-205ENST00000562540 NFIXQ14938 502 aa6.04□□□□□ -1.44
DENND4A-205ENST00000562540 MAP3K11Q16584 847 aa6.04□□□□□ -1.44
DENND4A-205ENST00000562540 IRF2BP1Q8IU81 584 aa6.04□□□□□ -1.44
DENND4A-205ENST00000562540 LILRA2Q8N149 483 aa6.04□□□□□ -1.44
DENND4A-205ENST00000562540 OXR1Q8N573 874 aa6.04□□□□□ -1.44
DENND4A-205ENST00000562540 MIR1-1HGQ9H1L0 117 aa6.04□□□□□ -1.44
DENND4A-205ENST00000562540 FITM1A5D6W6 292 aa6.03□□□□□ -1.44
DENND4A-205ENST00000562540 ZGLP1P0C6A0 271 aa6.03□□□□□ -1.44
DENND4A-205ENST00000562540 LIG3P49916 1009 aa6.03□□□□□ -1.44
DENND4A-205ENST00000562540 SKOR2Q2VWA4 1001 aaPredicted RBP6.03□□□□□ -1.44
DENND4A-205ENST00000562540 AGMOQ6ZNB7 445 aa6.03□□□□□ -1.44
DENND4A-205ENST00000562540 ZNF605Q86T29 641 aa6.03□□□□□ -1.44
DENND4A-205ENST00000562540 TSPYL5Q86VY4 417 aaPredicted RBP6.03□□□□□ -1.44
DENND4A-205ENST00000562540 MCATQ8IVS2 390 aaKnown RBP6.03□□□□□ -1.44
DENND4A-205ENST00000562540 DTWD2Q8NBA8 298 aa6.03□□□□□ -1.44
DENND4A-205ENST00000562540 DHX38Q92620 1227 aaKnown RBP6.03□□□□□ -1.44
DENND4A-205ENST00000562540 SYTL4Q96C24 671 aaPredicted RBP6.03□□□□□ -1.44
DENND4A-205ENST00000562540 GPR62Q9BZJ7 368 aa6.03□□□□□ -1.44
DENND4A-205ENST00000562540 MCOLN1Q9GZU1 580 aa6.03□□□□□ -1.44
DENND4A-205ENST00000562540 SP110Q9HB58 689 aa6.03□□□□□ -1.44
DENND4A-205ENST00000562540 ADAM30Q9UKF2 790 aa6.03□□□□□ -1.44
DENND4A-205ENST00000562540 KCNH3Q9ULD8 1083 aa6.03□□□□□ -1.44
DENND4A-205ENST00000562540 CEP131Q9UPN4 1083 aa6.03□□□□□ -1.44
DENND4A-205ENST00000562540 SEMA7AO75326 666 aa6.02□□□□□ -1.45
DENND4A-205ENST00000562540 GNA15P30679 374 aa6.02□□□□□ -1.45
DENND4A-205ENST00000562540 DLG4P78352 724 aa6.02□□□□□ -1.45
DENND4A-205ENST00000562540 TIGD5Q53EQ6 642 aa6.02□□□□□ -1.45
DENND4A-205ENST00000562540 CYB5D2Q8WUJ1 264 aa6.02□□□□□ -1.45
DENND4A-205ENST00000562540 ACSF2Q96CM8 615 aaPredicted RBP6.02□□□□□ -1.45
DENND4A-205ENST00000562540 CWC22Q9HCG8 908 aaKnown RBP6.02□□□□□ -1.45
DENND4A-205ENST00000562540 PCDHA11Q9Y5I1 949 aa6.02□□□□□ -1.45
DENND4A-205ENST00000562540 TSNAXIP1Q2TAA8 658 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms