RNA–Protein interactions for RNA: ENST00000561879.1

VAC14-203, Transcript of Vac14, PIKFYVE complex component, humanhuman

TSL 2

Gene VAC14, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAC14-203ENST00000561879 HSP90AA1P07900 732 aaKnown RBP12.36□□□□□ -0.43
VAC14-203ENST00000561879 CYP2D6P10635 497 aa12.36□□□□□ -0.43
VAC14-203ENST00000561879 PLCD1P51178 756 aa12.36□□□□□ -0.43
VAC14-203ENST00000561879 SART3Q15020 963 aaKnown RBP12.36□□□□□ -0.43
VAC14-203ENST00000561879 CCDC178Q5BJE1 867 aa12.36□□□□□ -0.43
VAC14-203ENST00000561879 C16orf86Q6ZW13 317 aa12.36□□□□□ -0.43
VAC14-203ENST00000561879 CYB5R4Q7L1T6 521 aa12.36□□□□□ -0.43
VAC14-203ENST00000561879 SGMS1Q86VZ5 419 aa12.36□□□□□ -0.43
VAC14-203ENST00000561879 PCMTD1Q96MG8 357 aaPredicted RBP12.36□□□□□ -0.43
VAC14-203ENST00000561879 EHD4Q9H223 541 aa12.36□□□□□ -0.43
VAC14-203ENST00000561879 DDX4Q9NQI0 724 aaKnown RBP12.36□□□□□ -0.43
VAC14-203ENST00000561879 INCENPQ9NQS7 918 aa12.36□□□□□ -0.43
VAC14-203ENST00000561879 TMOD2Q9NZR1 351 aa12.36□□□□□ -0.43
VAC14-203ENST00000561879 TPCN1Q9ULQ1 816 aa12.36□□□□□ -0.43
VAC14-203ENST00000561879 ANGEL1Q9UNK9 670 aaKnown RBP12.36□□□□□ -0.43
VAC14-203ENST00000561879 TIAM2Q8IVF5 1701 aa12.36□□□□□ -0.43
VAC14-203ENST00000561879 COL2A1P02458 1487 aaPredicted RBP12.35□□□□□ -0.43
VAC14-203ENST00000561879 LAMA4Q16363 1823 aa12.35□□□□□ -0.43
VAC14-203ENST00000561879 HLA-DOAP06340 250 aa12.35□□□□□ -0.43
VAC14-203ENST00000561879 GMPSP49915 693 aaPredicted RBP12.35□□□□□ -0.43
VAC14-203ENST00000561879 GABPAQ06546 454 aa12.35□□□□□ -0.43
VAC14-203ENST00000561879 ME3Q16798 604 aa12.35□□□□□ -0.43
VAC14-203ENST00000561879 FAM83AQ86UY5 434 aa12.35□□□□□ -0.43
VAC14-203ENST00000561879 METTL16Q86W50 562 aaKnown RBP12.35□□□□□ -0.43
VAC14-203ENST00000561879 IQCA1Q86XH1 822 aa12.35□□□□□ -0.43
VAC14-203ENST00000561879 FOXP4Q8IVH2 680 aaPredicted RBP12.35□□□□□ -0.43
VAC14-203ENST00000561879 BRF1Q92994 677 aa12.35□□□□□ -0.43
VAC14-203ENST00000561879 TCEANC2Q96MN5 208 aa12.35□□□□□ -0.43
VAC14-203ENST00000561879 BEGAINQ9BUH8 593 aa12.35□□□□□ -0.43
VAC14-203ENST00000561879 TDRD3Q9H7E2 651 aaKnown RBP12.35□□□□□ -0.43
VAC14-203ENST00000561879 MYOZ2Q9NPC6 264 aa12.35□□□□□ -0.43
VAC14-203ENST00000561879 TCP11L1Q9NUJ3 509 aa12.35□□□□□ -0.43
VAC14-203ENST00000561879 PI4KBQ9UBF8 816 aa12.35□□□□□ -0.43
VAC14-203ENST00000561879 ZNF70Q9UC06 446 aaPredicted RBP12.35□□□□□ -0.43
VAC14-203ENST00000561879 SWAP70Q9UH65 585 aa12.35□□□□□ -0.43
VAC14-203ENST00000561879 CNOT7Q9UIV1 285 aaKnown RBP12.35□□□□□ -0.43
VAC14-203ENST00000561879 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.35□□□□□ -0.43
VAC14-203ENST00000561879 ATRNL1Q5VV63 1379 aa12.34□□□□□ -0.43
VAC14-203ENST00000561879 ERICH2A1L162 156 aa12.34□□□□□ -0.43
VAC14-203ENST00000561879 H7C1D1 291 aa12.34□□□□□ -0.43
VAC14-203ENST00000561879 SH2B2O14492 632 aaPredicted RBP12.34□□□□□ -0.43
VAC14-203ENST00000561879 PDIA4P13667 645 aaKnown RBP12.34□□□□□ -0.43
VAC14-203ENST00000561879 DDIT3P35638 169 aa12.34□□□□□ -0.43
VAC14-203ENST00000561879 RCAN1P53805 252 aa12.34□□□□□ -0.43
VAC14-203ENST00000561879 NFIAQ12857 509 aa12.34□□□□□ -0.43
VAC14-203ENST00000561879 PICALMQ13492 652 aa12.34□□□□□ -0.43
VAC14-203ENST00000561879 RRP12Q5JTH9 1297 aaKnown RBP12.34□□□□□ -0.43
VAC14-203ENST00000561879 CHST3Q7LGC8 479 aa12.34□□□□□ -0.43
VAC14-203ENST00000561879 ZNF444Q8N0Y2 327 aaPredicted RBP12.34□□□□□ -0.43
VAC14-203ENST00000561879 RBM46Q8TBY0 533 aaKnown RBP12.34□□□□□ -0.43
VAC14-203ENST00000561879 FAM151AQ8WW52 585 aa12.34□□□□□ -0.43
VAC14-203ENST00000561879 ANKS1AQ92625 1134 aa12.34□□□□□ -0.43
VAC14-203ENST00000561879 MKNK2Q9HBH9 465 aa12.34□□□□□ -0.43
VAC14-203ENST00000561879 TOMM22Q9NS69 142 aa12.34□□□□□ -0.43
VAC14-203ENST00000561879 SAP30BPQ9UHR5 308 aaKnown RBP12.34□□□□□ -0.43
VAC14-203ENST00000561879 SERPINB13Q9UIV8 391 aa12.34□□□□□ -0.43
VAC14-203ENST00000561879 PCDHAC2Q9Y5I4 1007 aa12.34□□□□□ -0.43
VAC14-203ENST00000561879 ZC3H4Q9UPT8 1303 aaKnown RBP12.34□□□□□ -0.43
VAC14-203ENST00000561879 SMIM22K7EJ46 135 aa12.33□□□□□ -0.44
VAC14-203ENST00000561879 WNT10BO00744 389 aa12.33□□□□□ -0.44
VAC14-203ENST00000561879 IFIT3O14879 490 aaKnown RBP12.33□□□□□ -0.44
VAC14-203ENST00000561879 RANBP6O60518 1105 aaKnown RBP12.33□□□□□ -0.44
VAC14-203ENST00000561879 PFKFB2O60825 505 aa12.33□□□□□ -0.44
VAC14-203ENST00000561879 PDIA3P30101 505 aaKnown RBP12.33□□□□□ -0.44
VAC14-203ENST00000561879 CDK8P49336 464 aa12.33□□□□□ -0.44
VAC14-203ENST00000561879 GPR162Q16538 588 aa12.33□□□□□ -0.44
VAC14-203ENST00000561879 TMEM67Q5HYA8 995 aa12.33□□□□□ -0.44
VAC14-203ENST00000561879 DGKHQ86XP1 1220 aa12.33□□□□□ -0.44
VAC14-203ENST00000561879 NKX2-3Q8TAU0 364 aa12.33□□□□□ -0.44
VAC14-203ENST00000561879 ZSCAN10Q96SZ4 725 aaPredicted RBP12.33□□□□□ -0.44
VAC14-203ENST00000561879 LLPHQ9BRT6 129 aaKnown RBP12.33□□□□□ -0.44
VAC14-203ENST00000561879 UBAC1Q9BSL1 405 aa12.33□□□□□ -0.44
VAC14-203ENST00000561879 LRRC2Q9BYS8 371 aa12.33□□□□□ -0.44
VAC14-203ENST00000561879 ZMYND15Q9H091 742 aa12.33□□□□□ -0.44
VAC14-203ENST00000561879 LY9Q9HBG7 655 aa12.33□□□□□ -0.44
VAC14-203ENST00000561879 GPRC5DQ9NZD1 345 aa12.33□□□□□ -0.44
VAC14-203ENST00000561879 RNF181Q9P0P0 153 aa12.33□□□□□ -0.44
VAC14-203ENST00000561879 GJA3Q9Y6H8 435 aa12.33□□□□□ -0.44
VAC14-203ENST00000561879 ZNF541Q9H0D2 1346 aa12.33□□□□□ -0.44
VAC14-203ENST00000561879 TSPY2A6NKD2 308 aa12.32□□□□□ -0.44
VAC14-203ENST00000561879 PPP1R3GB7ZBB8 358 aa12.32□□□□□ -0.44
VAC14-203ENST00000561879 DHX16O60231 1041 aaKnown RBP12.32□□□□□ -0.44
VAC14-203ENST00000561879 HOXB1P14653 301 aaPredicted RBP12.32□□□□□ -0.44
VAC14-203ENST00000561879 RASA1P20936 1047 aa12.32□□□□□ -0.44
VAC14-203ENST00000561879 PPP2R5BQ15173 497 aa12.32□□□□□ -0.44
VAC14-203ENST00000561879 SEC23AQ15436 765 aa12.32□□□□□ -0.44
VAC14-203ENST00000561879 C9orf131Q5VYM1 1079 aa12.32□□□□□ -0.44
VAC14-203ENST00000561879 NEDD1Q8NHV4 660 aa12.32□□□□□ -0.44
VAC14-203ENST00000561879 GTF3C6Q969F1 213 aa12.32□□□□□ -0.44
VAC14-203ENST00000561879 DYNLL2Q96FJ2 89 aa12.32□□□□□ -0.44
VAC14-203ENST00000561879 CCDC17Q96LX7 622 aa12.32□□□□□ -0.44
VAC14-203ENST00000561879 SLKQ9H2G2 1235 aaPredicted RBP12.32□□□□□ -0.44
VAC14-203ENST00000561879 PRDM1O75626 825 aa12.31□□□□□ -0.44
VAC14-203ENST00000561879 NOVP48745 357 aa12.31□□□□□ -0.44
VAC14-203ENST00000561879 TNNI2P48788 182 aa12.31□□□□□ -0.44
VAC14-203ENST00000561879 TFAP4Q01664 338 aa12.31□□□□□ -0.44
VAC14-203ENST00000561879 APOBRQ0VD83 1088 aa12.31□□□□□ -0.44
VAC14-203ENST00000561879 TNFAIP1Q13829 316 aa12.31□□□□□ -0.44
VAC14-203ENST00000561879 WTAPQ15007 396 aa12.31□□□□□ -0.44
VAC14-203ENST00000561879 SYNE3Q6ZMZ3 975 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms