RNA–Protein interactions for RNA: ENST00000561354.1

CARMIL3-204, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 4

Gene CARMIL3, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-204ENST00000561354 USP14P54578 494 aa14.42□□□□□ -0.1
CARMIL3-204ENST00000561354 CCNA1P78396 465 aa14.42□□□□□ -0.1
CARMIL3-204ENST00000561354 MAP3K12Q12852 859 aa14.42□□□□□ -0.1
CARMIL3-204ENST00000561354 CCL14Q16627 93 aa14.42□□□□□ -0.1
CARMIL3-204ENST00000561354 LRIT3Q3SXY7 679 aa14.42□□□□□ -0.1
CARMIL3-204ENST00000561354 LHX8Q68G74 356 aa14.42□□□□□ -0.1
CARMIL3-204ENST00000561354 TTC6Q86TZ1 520 aa14.42□□□□□ -0.1
CARMIL3-204ENST00000561354 MAGEB6Q8N7X4 407 aa14.42□□□□□ -0.1
CARMIL3-204ENST00000561354 MIGA1Q8NAN2 632 aa14.42□□□□□ -0.1
CARMIL3-204ENST00000561354 FEZ1Q99689 392 aa14.42□□□□□ -0.1
CARMIL3-204ENST00000561354 KIAA1683Q9H0B3 1180 aa14.42□□□□□ -0.1
CARMIL3-204ENST00000561354 MYH1P12882 1939 aa14.41□□□□□ -0.1
CARMIL3-204ENST00000561354 CNMDO75829 334 aa14.41□□□□□ -0.1
CARMIL3-204ENST00000561354 GLRX3O76003 335 aaKnown RBP14.41□□□□□ -0.1
CARMIL3-204ENST00000561354 SYN1P17600 705 aa14.41□□□□□ -0.1
CARMIL3-204ENST00000561354 CCND3P30281 292 aaPredicted RBP14.41□□□□□ -0.1
CARMIL3-204ENST00000561354 MAGEA10P43363 369 aaPredicted RBP14.41□□□□□ -0.1
CARMIL3-204ENST00000561354 MAP2K5Q13163 448 aa14.41□□□□□ -0.1
CARMIL3-204ENST00000561354 LBX2Q6XYB7 198 aa14.41□□□□□ -0.1
CARMIL3-204ENST00000561354 CATSPERGQ6ZRH7 1159 aa14.41□□□□□ -0.1
CARMIL3-204ENST00000561354 FTSJ3Q8IY81 847 aaKnown RBP14.41□□□□□ -0.1
CARMIL3-204ENST00000561354 EDC3Q96F86 508 aaKnown RBP14.41□□□□□ -0.1
CARMIL3-204ENST00000561354 RAB3GAP1Q15042 981 aa14.4□□□□□ -0.1
CARMIL3-204ENST00000561354 ABCB5Q2M3G0 1257 aa14.4□□□□□ -0.1
CARMIL3-204ENST00000561354 CERKLQ49MI3 558 aaPredicted RBP14.4□□□□□ -0.1
CARMIL3-204ENST00000561354 ITPRIPQ8IWB1 547 aa14.4□□□□□ -0.1
CARMIL3-204ENST00000561354 TDHQ8IZJ6 230 aa14.4□□□□□ -0.1
CARMIL3-204ENST00000561354 SLC17A8Q8NDX2 589 aa14.4□□□□□ -0.1
CARMIL3-204ENST00000561354 ANTXR1Q9H6X2 564 aa14.4□□□□□ -0.1
CARMIL3-204ENST00000561354 CWC22Q9HCG8 908 aaKnown RBP14.4□□□□□ -0.1
CARMIL3-204ENST00000561354 CABP5Q9NP86 173 aa14.4□□□□□ -0.1
CARMIL3-204ENST00000561354 SLC15A5A6NIM6 579 aa14.39□□□□□ -0.11
CARMIL3-204ENST00000561354 HOXC6P09630 235 aa14.39□□□□□ -0.11
CARMIL3-204ENST00000561354 VCAM1P19320 739 aa14.39□□□□□ -0.11
CARMIL3-204ENST00000561354 PTPREP23469 700 aa14.39□□□□□ -0.11
CARMIL3-204ENST00000561354 ZYXQ15942 572 aaKnown RBP14.39□□□□□ -0.11
CARMIL3-204ENST00000561354 MFSD14CQ5VZR4 134 aa14.39□□□□□ -0.11
CARMIL3-204ENST00000561354 CEP85Q6P2H3 762 aa14.39□□□□□ -0.11
CARMIL3-204ENST00000561354 ERC1Q8IUD2 1116 aa14.39□□□□□ -0.11
CARMIL3-204ENST00000561354 RIOK1Q9BRS2 568 aaKnown RBP14.39□□□□□ -0.11
CARMIL3-204ENST00000561354 RLBP1P12271 317 aa14.38□□□□□ -0.11
CARMIL3-204ENST00000561354 SHMT1P34896 483 aa14.38□□□□□ -0.11
CARMIL3-204ENST00000561354 PLCD1P51178 756 aa14.38□□□□□ -0.11
CARMIL3-204ENST00000561354 LRRC26Q2I0M4 334 aa14.38□□□□□ -0.11
CARMIL3-204ENST00000561354 ACER1Q8TDN7 264 aa14.38□□□□□ -0.11
CARMIL3-204ENST00000561354 UBE2OQ9C0C9 1292 aaKnown RBP14.38□□□□□ -0.11
CARMIL3-204ENST00000561354 NDUFB9Q9Y6M9 179 aa14.38□□□□□ -0.11
CARMIL3-204ENST00000561354 MSCO60682 206 aa14.37□□□□□ -0.11
CARMIL3-204ENST00000561354 GUCY1A2P33402 732 aa14.37□□□□□ -0.11
CARMIL3-204ENST00000561354 GABPAQ06546 454 aa14.37□□□□□ -0.11
CARMIL3-204ENST00000561354 GRB14Q14449 540 aa14.37□□□□□ -0.11
CARMIL3-204ENST00000561354 TTF1Q15361 905 aaPredicted RBP14.37□□□□□ -0.11
CARMIL3-204ENST00000561354 AACSQ86V21 672 aa14.37□□□□□ -0.11
CARMIL3-204ENST00000561354 MIER1Q8N108 512 aa14.37□□□□□ -0.11
CARMIL3-204ENST00000561354 DEFB123Q8N688 67 aa14.37□□□□□ -0.11
CARMIL3-204ENST00000561354 FLRT1Q9NZU1 646 aa14.37□□□□□ -0.11
CARMIL3-204ENST00000561354 BTBD7Q9P203 1132 aa14.37□□□□□ -0.11
CARMIL3-204ENST00000561354 IVNS1ABPQ9Y6Y0 642 aa14.37□□□□□ -0.11
CARMIL3-204ENST00000561354 MAGEB6P1A0A0J9YX57 407 aa14.36□□□□□ -0.11
CARMIL3-204ENST00000561354 SPDYE16A6NNV3 312 aaPredicted RBP14.36□□□□□ -0.11
CARMIL3-204ENST00000561354 DLL1O00548 723 aa14.36□□□□□ -0.11
CARMIL3-204ENST00000561354 IGHA2P01877 340 aa14.36□□□□□ -0.11
CARMIL3-204ENST00000561354 POLR3DP05423 398 aaPredicted RBP14.36□□□□□ -0.11
CARMIL3-204ENST00000561354 CENPBP07199 599 aaPredicted RBP14.36□□□□□ -0.11
CARMIL3-204ENST00000561354 ATP2B2Q01814 1243 aa14.36□□□□□ -0.11
CARMIL3-204ENST00000561354 HSP90AB4PQ58FF6 505 aa14.36□□□□□ -0.11
CARMIL3-204ENST00000561354 WDR78Q5VTH9 848 aa14.36□□□□□ -0.11
CARMIL3-204ENST00000561354 LPAR1Q92633 364 aa14.36□□□□□ -0.11
CARMIL3-204ENST00000561354 RPAP3Q9H6T3 665 aaPredicted RBP14.36□□□□□ -0.11
CARMIL3-204ENST00000561354 DDX20Q9UHI6 824 aaKnown RBP14.36□□□□□ -0.11
CARMIL3-204ENST00000561354 EXOC6BQ9Y2D4 811 aa14.36□□□□□ -0.11
CARMIL3-204ENST00000561354 STRNO43815 780 aa14.35□□□□□ -0.11
CARMIL3-204ENST00000561354 COG2Q14746 738 aa14.35□□□□□ -0.11
CARMIL3-204ENST00000561354 SEPT2Q15019 361 aa14.35□□□□□ -0.11
CARMIL3-204ENST00000561354 NPLOC4Q8TAT6 608 aa14.35□□□□□ -0.11
CARMIL3-204ENST00000561354 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.35□□□□□ -0.11
CARMIL3-204ENST00000561354 CRNKL1Q9BZJ0 848 aaKnown RBP14.35□□□□□ -0.11
CARMIL3-204ENST00000561354 HOXC10Q9NYD6 342 aa14.35□□□□□ -0.11
CARMIL3-204ENST00000561354 STXBP5LQ9Y2K9 1186 aa14.35□□□□□ -0.11
CARMIL3-204ENST00000561354 LAMA3Q16787 3333 aa14.35□□□□□ -0.11
CARMIL3-204ENST00000561354 FRMPD3Q5JV73 1810 aa14.34□□□□□ -0.11
CARMIL3-204ENST00000561354 A0A1W2PRG0 241 aa14.34□□□□□ -0.11
CARMIL3-204ENST00000561354 DNM1LO00429 736 aa14.34□□□□□ -0.11
CARMIL3-204ENST00000561354 PDE6AP16499 860 aa14.34□□□□□ -0.11
CARMIL3-204ENST00000561354 SLC9C2Q5TAH2 1124 aa14.34□□□□□ -0.11
CARMIL3-204ENST00000561354 SHCBP1Q8NEM2 672 aa14.34□□□□□ -0.11
CARMIL3-204ENST00000561354 RHPN1Q8TCX5 695 aa14.34□□□□□ -0.11
CARMIL3-204ENST00000561354 SENP6Q9GZR1 1112 aaPredicted RBP14.34□□□□□ -0.11
CARMIL3-204ENST00000561354 MTMR10Q9NXD2 777 aa14.34□□□□□ -0.11
CARMIL3-204ENST00000561354 MCM9Q9NXL9 1143 aa14.34□□□□□ -0.11
CARMIL3-204ENST00000561354 CYBAP13498 195 aa14.33□□□□□ -0.12
CARMIL3-204ENST00000561354 CNGA1P29973 690 aa14.33□□□□□ -0.12
CARMIL3-204ENST00000561354 CYP2C19P33261 490 aa14.33□□□□□ -0.12
CARMIL3-204ENST00000561354 MDM2Q00987 491 aaPredicted RBP14.33□□□□□ -0.12
CARMIL3-204ENST00000561354 OLFML2BQ68BL8 750 aa14.33□□□□□ -0.12
CARMIL3-204ENST00000561354 Q7L0L9 218 aa14.33□□□□□ -0.12
CARMIL3-204ENST00000561354 DPP9Q86TI2 863 aa14.33□□□□□ -0.12
CARMIL3-204ENST00000561354 MOV10L1Q9BXT6 1211 aaKnown RBP14.33□□□□□ -0.12
CARMIL3-204ENST00000561354 IL1RAPL2Q9NP60 686 aa14.33□□□□□ -0.12
CARMIL3-204ENST00000561354 DCP1AQ9NPI6 582 aaPredicted RBP14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms