RNA–Protein interactions for RNA: ENST00000560842.1

PSMA4-221, Transcript of proteasome subunit alpha 4, humanhuman

TSL 1 (best)

Gene PSMA4, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-221ENST00000560842 CIAPIN1Q6FI81 312 aa7.55□□□□□ -1.2
PSMA4-221ENST00000560842 UBE3DQ7Z6J8 389 aa7.55□□□□□ -1.2
PSMA4-221ENST00000560842 CCDC120Q96HB5 630 aa7.55□□□□□ -1.2
PSMA4-221ENST00000560842 TMEM74Q96NL1 305 aa7.55□□□□□ -1.2
PSMA4-221ENST00000560842 KCNK12Q9HB15 430 aa7.55□□□□□ -1.2
PSMA4-221ENST00000560842 DCP1AQ9NPI6 582 aaPredicted RBP7.55□□□□□ -1.2
PSMA4-221ENST00000560842 KCNQ5Q9NR82 932 aa7.55□□□□□ -1.2
PSMA4-221ENST00000560842 GLDCP23378 1020 aa7.54□□□□□ -1.2
PSMA4-221ENST00000560842 LMNB2Q03252 620 aa7.54□□□□□ -1.2
PSMA4-221ENST00000560842 EPB41L4BQ9H329 900 aa7.54□□□□□ -1.2
PSMA4-221ENST00000560842 TLR6Q9Y2C9 796 aa7.54□□□□□ -1.2
PSMA4-221ENST00000560842 PCDHB5Q9Y5E4 795 aa7.54□□□□□ -1.2
PSMA4-221ENST00000560842 CSADQ9Y600 493 aa7.54□□□□□ -1.2
PSMA4-221ENST00000560842 TCAF2A6NFQ2 919 aa7.53□□□□□ -1.2
PSMA4-221ENST00000560842 SCAMP3O14828 347 aaKnown RBP7.53□□□□□ -1.2
PSMA4-221ENST00000560842 FANCGO15287 622 aa7.53□□□□□ -1.2
PSMA4-221ENST00000560842 GARTP22102 1010 aa7.53□□□□□ -1.2
PSMA4-221ENST00000560842 MAP3K11Q16584 847 aa7.53□□□□□ -1.2
PSMA4-221ENST00000560842 TSNAXIP1Q2TAA8 658 aa7.53□□□□□ -1.2
PSMA4-221ENST00000560842 C22orf34Q6ZV56 151 aa7.53□□□□□ -1.2
PSMA4-221ENST00000560842 HS2ST1Q7LGA3 356 aa7.53□□□□□ -1.2
PSMA4-221ENST00000560842 C20orf173Q96LM9 149 aa7.53□□□□□ -1.2
PSMA4-221ENST00000560842 SMG5Q9UPR3 1016 aaKnown RBP7.53□□□□□ -1.2
PSMA4-221ENST00000560842 ETV2O00321 342 aaPredicted RBP7.52□□□□□ -1.21
PSMA4-221ENST00000560842 HOXA5P20719 270 aa7.52□□□□□ -1.21
PSMA4-221ENST00000560842 CDC37L1Q7L3B6 337 aa7.52□□□□□ -1.21
PSMA4-221ENST00000560842 METTL16Q86W50 562 aaKnown RBP7.52□□□□□ -1.21
PSMA4-221ENST00000560842 RELL1Q8IUW5 271 aa7.52□□□□□ -1.21
PSMA4-221ENST00000560842 KCT2Q8NC54 265 aa7.52□□□□□ -1.21
PSMA4-221ENST00000560842 ZNF428Q96B54 188 aa7.52□□□□□ -1.21
PSMA4-221ENST00000560842 ACSBG1Q96GR2 724 aa7.52□□□□□ -1.21
PSMA4-221ENST00000560842 KBTBD4Q9NVX7 518 aa7.52□□□□□ -1.21
PSMA4-221ENST00000560842 SNCAIPQ9Y6H5 919 aa7.52□□□□□ -1.21
PSMA4-221ENST00000560842 FAM221AA4D161 298 aa7.51□□□□□ -1.21
PSMA4-221ENST00000560842 DCDC2CA8MYV0 355 aa7.51□□□□□ -1.21
PSMA4-221ENST00000560842 PRR33A8MZF0 331 aa7.51□□□□□ -1.21
PSMA4-221ENST00000560842 FAM155AB1AL88 458 aaPredicted RBP7.51□□□□□ -1.21
PSMA4-221ENST00000560842 GFRA2O00451 464 aa7.51□□□□□ -1.21
PSMA4-221ENST00000560842 ZNF76P36508 570 aa7.51□□□□□ -1.21
PSMA4-221ENST00000560842 CAMK2GQ13555 558 aaPredicted RBP7.51□□□□□ -1.21
PSMA4-221ENST00000560842 ZBTB37Q5TC79 503 aa7.51□□□□□ -1.21
PSMA4-221ENST00000560842 CDKAL1Q5VV42 579 aa7.51□□□□□ -1.21
PSMA4-221ENST00000560842 C12orf40Q86WS4 652 aa7.51□□□□□ -1.21
PSMA4-221ENST00000560842 ABHD4Q8TB40 342 aa7.51□□□□□ -1.21
PSMA4-221ENST00000560842 ALPK1Q96QP1 1244 aa7.51□□□□□ -1.21
PSMA4-221ENST00000560842 MIR1-1HGQ9H1L0 117 aa7.51□□□□□ -1.21
PSMA4-221ENST00000560842 COPRSQ9NQ92 184 aa7.51□□□□□ -1.21
PSMA4-221ENST00000560842 PICK1Q9NRD5 415 aa7.51□□□□□ -1.21
PSMA4-221ENST00000560842 PCDHA4Q9UN74 947 aa7.51□□□□□ -1.21
PSMA4-221ENST00000560842 JAG2Q9Y219 1238 aa7.51□□□□□ -1.21
PSMA4-221ENST00000560842 TACC3Q9Y6A5 838 aa7.51□□□□□ -1.21
PSMA4-221ENST00000560842 GREM1O60565 184 aa7.5□□□□□ -1.21
PSMA4-221ENST00000560842 LRIG2O94898 1065 aa7.5□□□□□ -1.21
PSMA4-221ENST00000560842 SLITRK5O94991 958 aa7.5□□□□□ -1.21
PSMA4-221ENST00000560842 PF4P02776 101 aa7.5□□□□□ -1.21
PSMA4-221ENST00000560842 GBP2P32456 591 aaPredicted RBP7.5□□□□□ -1.21
PSMA4-221ENST00000560842 SEPT6Q14141 434 aa7.5□□□□□ -1.21
PSMA4-221ENST00000560842 INPP5AQ14642 412 aa7.5□□□□□ -1.21
PSMA4-221ENST00000560842 LRFN4Q6PJG9 635 aa7.5□□□□□ -1.21
PSMA4-221ENST00000560842 ARMCX6Q7L4S7 300 aa7.5□□□□□ -1.21
PSMA4-221ENST00000560842 KCNN1Q92952 543 aa7.5□□□□□ -1.21
PSMA4-221ENST00000560842 SLC26A8Q96RN1 970 aa7.5□□□□□ -1.21
PSMA4-221ENST00000560842 GGT7Q9UJ14 662 aa7.5□□□□□ -1.21
PSMA4-221ENST00000560842 ST14Q9Y5Y6 855 aa7.5□□□□□ -1.21
PSMA4-221ENST00000560842 CNTNAP4Q9C0A0 1308 aa7.5□□□□□ -1.21
PSMA4-221ENST00000560842 H3BS24 57 aa7.49□□□□□ -1.21
PSMA4-221ENST00000560842 NUAK1O60285 661 aa7.49□□□□□ -1.21
PSMA4-221ENST00000560842 CILPO75339 1184 aa7.49□□□□□ -1.21
PSMA4-221ENST00000560842 LINC00310P59036 64 aa7.49□□□□□ -1.21
PSMA4-221ENST00000560842 SFRP5Q5T4F7 317 aa7.49□□□□□ -1.21
PSMA4-221ENST00000560842 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.49□□□□□ -1.21
PSMA4-221ENST00000560842 THAP5Q7Z6K1 395 aa7.49□□□□□ -1.21
PSMA4-221ENST00000560842 MFSD4AQ8N468 514 aa7.49□□□□□ -1.21
PSMA4-221ENST00000560842 GATAD2BQ8WXI9 593 aa7.49□□□□□ -1.21
PSMA4-221ENST00000560842 RNF34Q969K3 372 aa7.49□□□□□ -1.21
PSMA4-221ENST00000560842 RELTQ969Z4 430 aa7.49□□□□□ -1.21
PSMA4-221ENST00000560842 SRFP11831 508 aa7.48□□□□□ -1.21
PSMA4-221ENST00000560842 RAC2P15153 192 aa7.48□□□□□ -1.21
PSMA4-221ENST00000560842 RPL6Q02878 288 aaKnown RBP7.48□□□□□ -1.21
PSMA4-221ENST00000560842 HDXQ7Z353 690 aa7.48□□□□□ -1.21
PSMA4-221ENST00000560842 CAPN6Q9Y6Q1 641 aa7.48□□□□□ -1.21
PSMA4-221ENST00000560842 ROBO2Q9HCK4 1378 aa7.47□□□□□ -1.21
PSMA4-221ENST00000560842 F6X3S4 739 aa7.47□□□□□ -1.21
PSMA4-221ENST00000560842 LMNB1P20700 586 aa7.47□□□□□ -1.21
PSMA4-221ENST00000560842 EIF4A3P38919 411 aaKnown RBP7.47□□□□□ -1.21
PSMA4-221ENST00000560842 CDK8P49336 464 aa7.47□□□□□ -1.21
PSMA4-221ENST00000560842 HDLBPQ00341 1268 aaKnown RBP7.47□□□□□ -1.21
PSMA4-221ENST00000560842 FBXL19Q6PCT2 694 aa7.47□□□□□ -1.21
PSMA4-221ENST00000560842 BNC2Q6ZN30 1099 aaPredicted RBP7.47□□□□□ -1.21
PSMA4-221ENST00000560842 TTC6Q86TZ1 520 aa7.47□□□□□ -1.21
PSMA4-221ENST00000560842 ZNF507Q8TCN5 953 aa7.47□□□□□ -1.21
PSMA4-221ENST00000560842 PLPPR2Q96GM1 343 aa7.47□□□□□ -1.21
PSMA4-221ENST00000560842 LRRC3Q9BY71 257 aa7.47□□□□□ -1.21
PSMA4-221ENST00000560842 IGSF5Q9NSI5 407 aa7.47□□□□□ -1.21
PSMA4-221ENST00000560842 ADAMTS1Q9UHI8 967 aa7.47□□□□□ -1.21
PSMA4-221ENST00000560842 TPX2Q9ULW0 747 aaKnown RBP7.47□□□□□ -1.21
PSMA4-221ENST00000560842 F13A1P00488 732 aa7.46□□□□□ -1.22
PSMA4-221ENST00000560842 FAM196AQ6ZSG2 479 aa7.46□□□□□ -1.22
PSMA4-221ENST00000560842 UBE2FQ969M7 185 aa7.46□□□□□ -1.22
PSMA4-221ENST00000560842 PARD6AQ9NPB6 346 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms