RNA–Protein interactions for RNA: ENST00000560825.5

GABPB1-210, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,412 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-210ENST00000560825 CERKLQ49MI3 558 aaPredicted RBP13.54□□□□□ -0.24
GABPB1-210ENST00000560825 NBPF11Q86T75 865 aa13.54□□□□□ -0.24
GABPB1-210ENST00000560825 SIAH1Q8IUQ4 282 aa13.54□□□□□ -0.24
GABPB1-210ENST00000560825 TRIM34Q9BYJ4 488 aa13.54□□□□□ -0.24
GABPB1-210ENST00000560825 PORCNQ9H237 461 aa13.54□□□□□ -0.24
GABPB1-210ENST00000560825 AS3MTQ9HBK9 375 aa13.54□□□□□ -0.24
GABPB1-210ENST00000560825 POLR3DP05423 398 aaPredicted RBP13.53□□□□□ -0.24
GABPB1-210ENST00000560825 HOXA7P31268 230 aaPredicted RBP13.53□□□□□ -0.24
GABPB1-210ENST00000560825 HERVK_113P62684 666 aa13.53□□□□□ -0.24
GABPB1-210ENST00000560825 ARHGEF6Q15052 776 aa13.53□□□□□ -0.24
GABPB1-210ENST00000560825 ABCB5Q2M3G0 1257 aa13.53□□□□□ -0.24
GABPB1-210ENST00000560825 PRPF38BQ5VTL8 546 aaKnown RBP13.53□□□□□ -0.24
GABPB1-210ENST00000560825 TMEM106CQ9BVX2 250 aa13.53□□□□□ -0.24
GABPB1-210ENST00000560825 CRNKL1Q9BZJ0 848 aaKnown RBP13.53□□□□□ -0.24
GABPB1-210ENST00000560825 MORF4L1Q9UBU8 362 aa13.53□□□□□ -0.24
GABPB1-210ENST00000560825 TAOK2Q9UL54 1235 aa13.53□□□□□ -0.24
GABPB1-210ENST00000560825 MYH4Q9Y623 1939 aa13.52□□□□□ -0.24
GABPB1-210ENST00000560825 IGSF3O75054 1194 aa13.52□□□□□ -0.25
GABPB1-210ENST00000560825 INHAP05111 366 aa13.52□□□□□ -0.25
GABPB1-210ENST00000560825 AKR1B1P15121 316 aa13.52□□□□□ -0.25
GABPB1-210ENST00000560825 PRMT2P55345 433 aa13.52□□□□□ -0.25
GABPB1-210ENST00000560825 UBE2Q1Q7Z7E8 422 aa13.52□□□□□ -0.25
GABPB1-210ENST00000560825 TTC6Q86TZ1 520 aa13.52□□□□□ -0.25
GABPB1-210ENST00000560825 ECHDC1Q9NTX5 307 aa13.52□□□□□ -0.25
GABPB1-210ENST00000560825 M0R2C6 588 aa13.51□□□□□ -0.25
GABPB1-210ENST00000560825 VCAM1P19320 739 aa13.51□□□□□ -0.25
GABPB1-210ENST00000560825 STK11IPQ8N1F8 1099 aa13.51□□□□□ -0.25
GABPB1-210ENST00000560825 PI4K2BQ8TCG2 481 aa13.51□□□□□ -0.25
GABPB1-210ENST00000560825 OSBP2Q969R2 916 aa13.51□□□□□ -0.25
GABPB1-210ENST00000560825 SEC62Q99442 399 aaKnown RBP13.51□□□□□ -0.25
GABPB1-210ENST00000560825 TBC1D2Q9BYX2 928 aa13.51□□□□□ -0.25
GABPB1-210ENST00000560825 RNF208Q9H0X6 261 aa13.51□□□□□ -0.25
GABPB1-210ENST00000560825 FOXD4L1Q9NU39 408 aa13.51□□□□□ -0.25
GABPB1-210ENST00000560825 TMOD4Q9NZQ9 345 aa13.51□□□□□ -0.25
GABPB1-210ENST00000560825 BTBD7Q9P203 1132 aa13.51□□□□□ -0.25
GABPB1-210ENST00000560825 BIN2Q9UBW5 565 aaPredicted RBP13.51□□□□□ -0.25
GABPB1-210ENST00000560825 PNMA3Q9UL41 463 aa13.51□□□□□ -0.25
GABPB1-210ENST00000560825 ZNFX1Q9P2E3 1918 aaKnown RBP13.51□□□□□ -0.25
GABPB1-210ENST00000560825 CEP290O15078 2479 aa13.51□□□□□ -0.25
GABPB1-210ENST00000560825 C19orf81C9J6K1 198 aa13.5□□□□□ -0.25
GABPB1-210ENST00000560825 USP17L12C9JPN9 530 aa13.5□□□□□ -0.25
GABPB1-210ENST00000560825 USP17L21D6R901 530 aa13.5□□□□□ -0.25
GABPB1-210ENST00000560825 HOXD10P28358 340 aa13.5□□□□□ -0.25
GABPB1-210ENST00000560825 GCLCP48506 637 aaPredicted RBP13.5□□□□□ -0.25
GABPB1-210ENST00000560825 IRX3P78415 501 aaPredicted RBP13.5□□□□□ -0.25
GABPB1-210ENST00000560825 C12orf60Q5U649 245 aa13.5□□□□□ -0.25
GABPB1-210ENST00000560825 CTR9Q6PD62 1173 aa13.5□□□□□ -0.25
GABPB1-210ENST00000560825 USP17L2Q6R6M4 530 aa13.5□□□□□ -0.25
GABPB1-210ENST00000560825 TRIB2Q92519 343 aa13.5□□□□□ -0.25
GABPB1-210ENST00000560825 C12orf42Q96LP6 360 aa13.5□□□□□ -0.25
GABPB1-210ENST00000560825 PAGR1Q9BTK6 254 aa13.5□□□□□ -0.25
GABPB1-210ENST00000560825 LAMA3Q16787 3333 aa13.5□□□□□ -0.25
GABPB1-210ENST00000560825 SALL3Q9BXA9 1300 aa13.5□□□□□ -0.25
GABPB1-210ENST00000560825 MPHOSPH10O00566 681 aaKnown RBP13.49□□□□□ -0.25
GABPB1-210ENST00000560825 GJA8P48165 433 aa13.49□□□□□ -0.25
GABPB1-210ENST00000560825 IRF5Q13568 498 aa13.49□□□□□ -0.25
GABPB1-210ENST00000560825 UBE3CQ15386 1083 aa13.49□□□□□ -0.25
GABPB1-210ENST00000560825 CCL14Q16627 93 aa13.49□□□□□ -0.25
GABPB1-210ENST00000560825 CATSPERGQ6ZRH7 1159 aa13.49□□□□□ -0.25
GABPB1-210ENST00000560825 SLAIN1Q8ND83 568 aa13.49□□□□□ -0.25
GABPB1-210ENST00000560825 U2AF1L4Q8WU68 220 aaKnown RBP13.49□□□□□ -0.25
GABPB1-210ENST00000560825 STRBPQ96SI9 672 aaKnown RBP13.49□□□□□ -0.25
GABPB1-210ENST00000560825 FEZ1Q99689 392 aa13.49□□□□□ -0.25
GABPB1-210ENST00000560825 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.49□□□□□ -0.25
GABPB1-210ENST00000560825 KIAA1683Q9H0B3 1180 aa13.49□□□□□ -0.25
GABPB1-210ENST00000560825 EPB41L4AQ9HCS5 686 aaPredicted RBP13.49□□□□□ -0.25
GABPB1-210ENST00000560825 SLC4A4Q9Y6R1 1079 aa13.49□□□□□ -0.25
GABPB1-210ENST00000560825 LAMA2P24043 3122 aaKnown RBP13.49□□□□□ -0.25
GABPB1-210ENST00000560825 GSG1L2A8MUP6 293 aa13.48□□□□□ -0.25
GABPB1-210ENST00000560825 GJB1P08034 283 aa13.48□□□□□ -0.25
GABPB1-210ENST00000560825 CYP2B6P20813 491 aa13.48□□□□□ -0.25
GABPB1-210ENST00000560825 CDK8P49336 464 aa13.48□□□□□ -0.25
GABPB1-210ENST00000560825 ERVK-9P63128 1117 aa13.48□□□□□ -0.25
GABPB1-210ENST00000560825 ERVK-24P63145 666 aa13.48□□□□□ -0.25
GABPB1-210ENST00000560825 CERS3Q8IU89 383 aa13.48□□□□□ -0.25
GABPB1-210ENST00000560825 KBTBD3Q8NAB2 608 aa13.48□□□□□ -0.25
GABPB1-210ENST00000560825 PXYLP1Q8TE99 480 aa13.48□□□□□ -0.25
GABPB1-210ENST00000560825 DIS3LQ8TF46 1054 aaKnown RBP13.48□□□□□ -0.25
GABPB1-210ENST00000560825 USP6NLQ92738 828 aa13.48□□□□□ -0.25
GABPB1-210ENST00000560825 DEFB118Q96PH6 123 aa13.48□□□□□ -0.25
GABPB1-210ENST00000560825 CHMP4BQ9H444 224 aaKnown RBP13.48□□□□□ -0.25
GABPB1-210ENST00000560825 RPAP3Q9H6T3 665 aaPredicted RBP13.48□□□□□ -0.25
GABPB1-210ENST00000560825 GINM1Q9NU53 330 aa13.48□□□□□ -0.25
GABPB1-210ENST00000560825 PLXNA1Q9UIW2 1896 aa13.48□□□□□ -0.25
GABPB1-210ENST00000560825 SPDYE16A6NNV3 312 aaPredicted RBP13.47□□□□□ -0.25
GABPB1-210ENST00000560825 FOXP2O15409 715 aa13.47□□□□□ -0.25
GABPB1-210ENST00000560825 SLC34A2O95436 690 aa13.47□□□□□ -0.25
GABPB1-210ENST00000560825 PABPC4Q13310 644 aaKnown RBP eCLIP13.47□□□□□ -0.25
GABPB1-210ENST00000560825 TMED8Q6PL24 325 aaPredicted RBP13.47□□□□□ -0.25
GABPB1-210ENST00000560825 SPICE1Q8N0Z3 855 aa13.47□□□□□ -0.25
GABPB1-210ENST00000560825 GPRC5AQ8NFJ5 357 aa13.47□□□□□ -0.25
GABPB1-210ENST00000560825 COA7Q96BR5 231 aa13.47□□□□□ -0.25
GABPB1-210ENST00000560825 PAK6Q9NQU5 681 aaPredicted RBP13.47□□□□□ -0.25
GABPB1-210ENST00000560825 ATP8A2Q9NTI2 1148 aa13.47□□□□□ -0.25
GABPB1-210ENST00000560825 FLRT1Q9NZU1 646 aa13.47□□□□□ -0.25
GABPB1-210ENST00000560825 H0YGN5 161 aa13.47□□□□□ -0.25
GABPB1-210ENST00000560825 MNX1P50219 401 aaPredicted RBP13.47□□□□□ -0.25
GABPB1-210ENST00000560825 MORN1Q5T089 497 aa13.47□□□□□ -0.25
GABPB1-210ENST00000560825 C16orf86Q6ZW13 317 aa13.47□□□□□ -0.25
GABPB1-210ENST00000560825 GPR142Q7Z601 462 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms