RNA–Protein interactions for RNA: ENST00000560715.5

TSPAN3-209, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 2,892 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-209ENST00000560715 ATG3Q9NT62 314 aa7.81□□□□□ -1.16
TSPAN3-209ENST00000560715 CLIC5Q9NZA1 410 aa7.81□□□□□ -1.16
TSPAN3-209ENST00000560715 FOXO3O43524 673 aa7.8□□□□□ -1.16
TSPAN3-209ENST00000560715 TPM3P06753 285 aa7.8□□□□□ -1.16
TSPAN3-209ENST00000560715 L1CAMP32004 1257 aa7.8□□□□□ -1.16
TSPAN3-209ENST00000560715 SOX9P48436 509 aa7.8□□□□□ -1.16
TSPAN3-209ENST00000560715 RENBPP51606 427 aa7.8□□□□□ -1.16
TSPAN3-209ENST00000560715 SATB1Q01826 763 aa7.8□□□□□ -1.16
TSPAN3-209ENST00000560715 CCDC85BQ15834 202 aaPredicted RBP7.8□□□□□ -1.16
TSPAN3-209ENST00000560715 MPNDQ8N594 471 aa7.8□□□□□ -1.16
TSPAN3-209ENST00000560715 ZNF397Q8NF99 534 aaPredicted RBP7.8□□□□□ -1.16
TSPAN3-209ENST00000560715 FBXO27Q8NI29 283 aa7.8□□□□□ -1.16
TSPAN3-209ENST00000560715 KIF1BPQ96EK5 621 aa7.8□□□□□ -1.16
TSPAN3-209ENST00000560715 NOL10Q9BSC4 688 aaKnown RBP7.8□□□□□ -1.16
TSPAN3-209ENST00000560715 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.8□□□□□ -1.16
TSPAN3-209ENST00000560715 STK3Q13188 491 aa7.8□□□□□ -1.16
TSPAN3-209ENST00000560715 CCDC70Q6NSX1 233 aa7.8□□□□□ -1.16
TSPAN3-209ENST00000560715 C6orf15Q6UXA7 325 aaPredicted RBP7.8□□□□□ -1.16
TSPAN3-209ENST00000560715 MFSD3Q96ES6 412 aa7.8□□□□□ -1.16
TSPAN3-209ENST00000560715 DDX20Q9UHI6 824 aaKnown RBP7.8□□□□□ -1.16
TSPAN3-209ENST00000560715 ARHGEF28Q8N1W1 1705 aaKnown RBP7.79□□□□□ -1.16
TSPAN3-209ENST00000560715 CCDC163A0A0D9SF12 145 aa7.79□□□□□ -1.16
TSPAN3-209ENST00000560715 SLC34A2O95436 690 aa7.79□□□□□ -1.16
TSPAN3-209ENST00000560715 ADCY5O95622 1261 aa7.79□□□□□ -1.16
TSPAN3-209ENST00000560715 RBP3P10745 1247 aa7.79□□□□□ -1.16
TSPAN3-209ENST00000560715 MRM1Q6IN84 353 aaKnown RBP7.79□□□□□ -1.16
TSPAN3-209ENST00000560715 C1orf228Q6PIY5 440 aa7.79□□□□□ -1.16
TSPAN3-209ENST00000560715 MAGEB6Q8N7X4 407 aa7.79□□□□□ -1.16
TSPAN3-209ENST00000560715 CAAP1Q9H8G2 361 aa7.79□□□□□ -1.16
TSPAN3-209ENST00000560715 ZNF446Q9NWS9 450 aa7.79□□□□□ -1.16
TSPAN3-209ENST00000560715 TMPRSS15P98073 1019 aa7.79□□□□□ -1.16
TSPAN3-209ENST00000560715 IDI1Q13907 227 aa7.79□□□□□ -1.16
TSPAN3-209ENST00000560715 COBLL1Q53SF7 1204 aa7.79□□□□□ -1.16
TSPAN3-209ENST00000560715 RNF20Q5VTR2 975 aa7.79□□□□□ -1.16
TSPAN3-209ENST00000560715 DESI1Q6ICB0 168 aa7.79□□□□□ -1.16
TSPAN3-209ENST00000560715 PRPF40BQ6NWY9 871 aaKnown RBP7.79□□□□□ -1.16
TSPAN3-209ENST00000560715 CCDC74AQ96AQ1 378 aa7.79□□□□□ -1.16
TSPAN3-209ENST00000560715 POLKQ9UBT6 870 aa7.79□□□□□ -1.16
TSPAN3-209ENST00000560715 USP25Q9UHP3 1055 aa7.79□□□□□ -1.16
TSPAN3-209ENST00000560715 ZBTB21Q9ULJ3 1066 aa7.79□□□□□ -1.16
TSPAN3-209ENST00000560715 NSFL1CQ9UNZ2 370 aaKnown RBP7.79□□□□□ -1.16
TSPAN3-209ENST00000560715 CLTCQ00610 1675 aaKnown RBP7.78□□□□□ -1.16
TSPAN3-209ENST00000560715 MYO1CO00159 1063 aa7.78□□□□□ -1.16
TSPAN3-209ENST00000560715 TGFB3P10600 412 aa7.78□□□□□ -1.16
TSPAN3-209ENST00000560715 NBPF20Q3BBV1 942 aa7.78□□□□□ -1.16
TSPAN3-209ENST00000560715 KMT5BQ4FZB7 885 aa7.78□□□□□ -1.16
TSPAN3-209ENST00000560715 SEZ6Q53EL9 994 aa7.78□□□□□ -1.16
TSPAN3-209ENST00000560715 HSP90AB3PQ58FF7 597 aa7.78□□□□□ -1.16
TSPAN3-209ENST00000560715 PERM1Q5SV97 790 aa7.78□□□□□ -1.16
TSPAN3-209ENST00000560715 CHRDL2Q6WN34 429 aa7.78□□□□□ -1.16
TSPAN3-209ENST00000560715 RUFY4Q6ZNE9 571 aa7.78□□□□□ -1.16
TSPAN3-209ENST00000560715 AFAP1L2Q8N4X5 818 aa7.78□□□□□ -1.16
TSPAN3-209ENST00000560715 GOLM1Q8NBJ4 401 aa7.78□□□□□ -1.16
TSPAN3-209ENST00000560715 SKA1Q96BD8 255 aa7.78□□□□□ -1.16
TSPAN3-209ENST00000560715 DONSONQ9NYP3 566 aa7.78□□□□□ -1.16
TSPAN3-209ENST00000560715 PYCARDQ9ULZ3 195 aa7.78□□□□□ -1.16
TSPAN3-209ENST00000560715 COLQQ9Y215 455 aaPredicted RBP7.78□□□□□ -1.16
TSPAN3-209ENST00000560715 ANKRD36BQ8N2N9 1353 aa7.78□□□□□ -1.16
TSPAN3-209ENST00000560715 ALG1L2C9J202 215 aa7.78□□□□□ -1.16
TSPAN3-209ENST00000560715 RBM6P78332 1123 aaKnown RBP7.78□□□□□ -1.16
TSPAN3-209ENST00000560715 PICALMQ13492 652 aa7.78□□□□□ -1.16
TSPAN3-209ENST00000560715 ALKBH2Q6NS38 261 aa7.78□□□□□ -1.16
TSPAN3-209ENST00000560715 TXLNBQ8N3L3 684 aa7.78□□□□□ -1.16
TSPAN3-209ENST00000560715 SYAP1Q96A49 352 aaPredicted RBP7.78□□□□□ -1.16
TSPAN3-209ENST00000560715 PRDM9Q9NQV7 894 aa7.78□□□□□ -1.16
TSPAN3-209ENST00000560715 RAB6BQ9NRW1 208 aa7.78□□□□□ -1.16
TSPAN3-209ENST00000560715 OBP2AQ9NY56 170 aa7.78□□□□□ -1.16
TSPAN3-209ENST00000560715 PAXBP1Q9Y5B6 917 aa7.78□□□□□ -1.16
TSPAN3-209ENST00000560715 PARP3Q9Y6F1 533 aa7.78□□□□□ -1.16
TSPAN3-209ENST00000560715 ARHGEF40Q8TER5 1519 aa7.78□□□□□ -1.16
TSPAN3-209ENST00000560715 USP4Q13107 963 aa7.77□□□□□ -1.16
TSPAN3-209ENST00000560715 DGKZQ13574 1117 aa7.77□□□□□ -1.16
TSPAN3-209ENST00000560715 ABCB5Q2M3G0 1257 aa7.77□□□□□ -1.16
TSPAN3-209ENST00000560715 FAM102BQ5T8I3 360 aa7.77□□□□□ -1.16
TSPAN3-209ENST00000560715 PCNX4Q63HM2 1172 aa7.77□□□□□ -1.16
TSPAN3-209ENST00000560715 SYT10Q6XYQ8 523 aa7.77□□□□□ -1.16
TSPAN3-209ENST00000560715 ZBTB46Q86UZ6 589 aa7.77□□□□□ -1.16
TSPAN3-209ENST00000560715 RELTQ969Z4 430 aa7.77□□□□□ -1.16
TSPAN3-209ENST00000560715 COL26A1Q96A83 441 aa7.77□□□□□ -1.16
TSPAN3-209ENST00000560715 NBPF3Q9H094 633 aa7.77□□□□□ -1.16
TSPAN3-209ENST00000560715 SLC12A5Q9H2X9 1139 aa7.77□□□□□ -1.16
TSPAN3-209ENST00000560715 KCNF1Q9H3M0 494 aa7.77□□□□□ -1.16
TSPAN3-209ENST00000560715 TRHDEQ9UKU6 1024 aa7.77□□□□□ -1.16
TSPAN3-209ENST00000560715 FIBPO43427 364 aa7.77□□□□□ -1.17
TSPAN3-209ENST00000560715 SNX2O60749 519 aa7.77□□□□□ -1.17
TSPAN3-209ENST00000560715 FAM153BP0C7A2 387 aa7.77□□□□□ -1.17
TSPAN3-209ENST00000560715 RLBP1P12271 317 aa7.77□□□□□ -1.17
TSPAN3-209ENST00000560715 SCNN1DP51172 638 aa7.77□□□□□ -1.17
TSPAN3-209ENST00000560715 PABPC4Q13310 644 aaKnown RBP eCLIP7.77□□□□□ -1.174e-7■■■■□ 24.1
TSPAN3-209ENST00000560715 PKP1Q13835 747 aa7.77□□□□□ -1.17
TSPAN3-209ENST00000560715 GRM3Q14832 879 aa7.77□□□□□ -1.17
TSPAN3-209ENST00000560715 THAP3Q8WTV1 239 aaPredicted RBP7.77□□□□□ -1.17
TSPAN3-209ENST00000560715 BCO2Q9BYV7 579 aa7.77□□□□□ -1.17
TSPAN3-209ENST00000560715 ACTR10Q9NZ32 417 aa7.77□□□□□ -1.17
TSPAN3-209ENST00000560715 ASAP1Q9ULH1 1129 aa7.77□□□□□ -1.17
TSPAN3-209ENST00000560715 JRKLQ9Y4A0 524 aa7.77□□□□□ -1.17
TSPAN3-209ENST00000560715 KIF1CO43896 1103 aaKnown RBP7.77□□□□□ -1.17
TSPAN3-209ENST00000560715 PPP2R1AP30153 589 aa7.77□□□□□ -1.17
TSPAN3-209ENST00000560715 GRM1Q13255 1194 aa7.77□□□□□ -1.17
TSPAN3-209ENST00000560715 RASGRF1Q13972 1273 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms