RNA–Protein interactions for RNA: ENST00000559778.5

CPNE6-213, Transcript of copine 6, humanhuman

TSL 4

Gene CPNE6, Length 543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-213ENST00000559778 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.87■□□□□ 0.77
CPNE6-213ENST00000559778 CABP5Q9NP86 173 aa19.87■□□□□ 0.77
CPNE6-213ENST00000559778 RBPJLQ9UBG7 517 aa19.87■□□□□ 0.77
CPNE6-213ENST00000559778 A0A0G2JMZ2 1700 aa19.87■□□□□ 0.77
CPNE6-213ENST00000559778 POLR3DP05423 398 aaPredicted RBP19.86■□□□□ 0.77
CPNE6-213ENST00000559778 ATP5JP18859 108 aa19.86■□□□□ 0.77
CPNE6-213ENST00000559778 MAPK4P31152 587 aa19.86■□□□□ 0.77
CPNE6-213ENST00000559778 PLCD1P51178 756 aa19.86■□□□□ 0.77
CPNE6-213ENST00000559778 GABPAQ06546 454 aa19.86■□□□□ 0.77
CPNE6-213ENST00000559778 SOCS4Q8WXH5 440 aa19.86■□□□□ 0.77
CPNE6-213ENST00000559778 PAWRQ96IZ0 340 aaKnown RBP19.86■□□□□ 0.77
CPNE6-213ENST00000559778 FEZ1Q99689 392 aa19.86■□□□□ 0.77
CPNE6-213ENST00000559778 TXNRD2Q9NNW7 524 aa19.86■□□□□ 0.77
CPNE6-213ENST00000559778 PAG1Q9NWQ8 432 aa19.86■□□□□ 0.77
CPNE6-213ENST00000559778 COL6A3P12111 3177 aa19.86■□□□□ 0.77
CPNE6-213ENST00000559778 USP17L15C9J2P7 530 aa19.85■□□□□ 0.77
CPNE6-213ENST00000559778 USP17L13C9JLJ4 530 aa19.85■□□□□ 0.77
CPNE6-213ENST00000559778 USP17L11C9JVI0 530 aa19.85■□□□□ 0.77
CPNE6-213ENST00000559778 USP17L18D6R9N7 530 aa19.85■□□□□ 0.77
CPNE6-213ENST00000559778 USP17L22D6RA61 530 aa19.85■□□□□ 0.77
CPNE6-213ENST00000559778 USP17L17D6RBQ6 530 aa19.85■□□□□ 0.77
CPNE6-213ENST00000559778 USP17L19D6RCP7 530 aa19.85■□□□□ 0.77
CPNE6-213ENST00000559778 USP17L20D6RJB6 530 aa19.85■□□□□ 0.77
CPNE6-213ENST00000559778 XRCC5P13010 732 aaKnown RBP19.85■□□□□ 0.77
CPNE6-213ENST00000559778 ERVK-9P63128 1117 aa19.85■□□□□ 0.77
CPNE6-213ENST00000559778 ERVK-24P63145 666 aa19.85■□□□□ 0.77
CPNE6-213ENST00000559778 USP17L24Q0WX57 530 aa19.85■□□□□ 0.77
CPNE6-213ENST00000559778 RAB3GAP1Q15042 981 aa19.85■□□□□ 0.77
CPNE6-213ENST00000559778 NUDT12Q9BQG2 462 aa19.85■□□□□ 0.77
CPNE6-213ENST00000559778 RPTORQ8N122 1335 aa19.84■□□□□ 0.77
CPNE6-213ENST00000559778 ZNF236Q9UL36 1845 aa19.84■□□□□ 0.77
CPNE6-213ENST00000559778 TRMT44Q8IYL2 757 aaKnown RBP19.84■□□□□ 0.77
CPNE6-213ENST00000559778 ANKLE1Q8NAG6 615 aa19.84■□□□□ 0.77
CPNE6-213ENST00000559778 DIS3LQ8TF46 1054 aaKnown RBP19.84■□□□□ 0.77
CPNE6-213ENST00000559778 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.84■□□□□ 0.77
CPNE6-213ENST00000559778 DCP1AQ9NPI6 582 aaPredicted RBP19.84■□□□□ 0.77
CPNE6-213ENST00000559778 MCM9Q9NXL9 1143 aa19.84■□□□□ 0.77
CPNE6-213ENST00000559778 RABGAP1Q9Y3P9 1069 aa19.84■□□□□ 0.77
CPNE6-213ENST00000559778 ADD2P35612 726 aa19.83■□□□□ 0.77
CPNE6-213ENST00000559778 LBX2Q6XYB7 198 aa19.83■□□□□ 0.77
CPNE6-213ENST00000559778 CATSPERGQ6ZRH7 1159 aa19.83■□□□□ 0.77
CPNE6-213ENST00000559778 NECAB2Q7Z6G3 386 aa19.83■□□□□ 0.77
CPNE6-213ENST00000559778 LCORLQ8N3X6 602 aa19.83■□□□□ 0.77
CPNE6-213ENST00000559778 TRIB2Q92519 343 aa19.83■□□□□ 0.77
CPNE6-213ENST00000559778 HAUS7Q99871 368 aa19.83■□□□□ 0.77
CPNE6-213ENST00000559778 HMX1Q9NP08 348 aaPredicted RBP19.83■□□□□ 0.77
CPNE6-213ENST00000559778 ATP8A2Q9NTI2 1148 aa19.83■□□□□ 0.77
CPNE6-213ENST00000559778 SOX1O00570 391 aaPredicted RBP19.82■□□□□ 0.76
CPNE6-213ENST00000559778 VCAM1P19320 739 aa19.82■□□□□ 0.76
CPNE6-213ENST00000559778 GUCY1A2P33402 732 aa19.82■□□□□ 0.76
CPNE6-213ENST00000559778 CCNA1P78396 465 aa19.82■□□□□ 0.76
CPNE6-213ENST00000559778 ZYXQ15942 572 aaKnown RBP19.82■□□□□ 0.76
CPNE6-213ENST00000559778 Q3C1V9 767 aa19.82■□□□□ 0.76
CPNE6-213ENST00000559778 SDR42E1Q8WUS8 393 aa19.82■□□□□ 0.76
CPNE6-213ENST00000559778 USP6NLQ92738 828 aa19.82■□□□□ 0.76
CPNE6-213ENST00000559778 EDC3Q96F86 508 aaKnown RBP19.82■□□□□ 0.76
CPNE6-213ENST00000559778 LRRCC1Q9C099 1032 aa19.82■□□□□ 0.76
CPNE6-213ENST00000559778 SWAP70Q9UH65 585 aa19.82■□□□□ 0.76
CPNE6-213ENST00000559778 COL11A1P12107 1806 aaPredicted RBP19.81■□□□□ 0.76
CPNE6-213ENST00000559778 GREB1LQ9C091 1923 aaPredicted RBP19.81■□□□□ 0.76
CPNE6-213ENST00000559778 ZNFX1Q9P2E3 1918 aaKnown RBP19.81■□□□□ 0.76
CPNE6-213ENST00000559778 MAP3K21Q5TCX8 1036 aa19.81■□□□□ 0.76
CPNE6-213ENST00000559778 POTEEQ6S8J3 1075 aa19.81■□□□□ 0.76
CPNE6-213ENST00000559778 GPR142Q7Z601 462 aa19.81■□□□□ 0.76
CPNE6-213ENST00000559778 CCAR1Q8IX12 1150 aaKnown RBP19.81■□□□□ 0.76
CPNE6-213ENST00000559778 ACER1Q8TDN7 264 aa19.81■□□□□ 0.76
CPNE6-213ENST00000559778 PAGR1Q9BTK6 254 aa19.81■□□□□ 0.76
CPNE6-213ENST00000559778 PORCNQ9H237 461 aa19.81■□□□□ 0.76
CPNE6-213ENST00000559778 BOLA2Q9H3K6 86 aa19.81■□□□□ 0.76
CPNE6-213ENST00000559778 STAP2Q9UGK3 403 aa19.81■□□□□ 0.76
CPNE6-213ENST00000559778 PEX10O60683 326 aa19.8■□□□□ 0.76
CPNE6-213ENST00000559778 CYP2B6P20813 491 aa19.8■□□□□ 0.76
CPNE6-213ENST00000559778 RGS2P41220 211 aa19.8■□□□□ 0.76
CPNE6-213ENST00000559778 TRIM32Q13049 653 aa19.8■□□□□ 0.76
CPNE6-213ENST00000559778 SEPT2Q15019 361 aa19.8■□□□□ 0.76
CPNE6-213ENST00000559778 UBE3CQ15386 1083 aa19.8■□□□□ 0.76
CPNE6-213ENST00000559778 MORN1Q5T089 497 aa19.8■□□□□ 0.76
CPNE6-213ENST00000559778 PLEKHH3Q7Z736 793 aa19.8■□□□□ 0.76
CPNE6-213ENST00000559778 GDF15Q99988 308 aa19.8■□□□□ 0.76
CPNE6-213ENST00000559778 ARMT1Q9H993 441 aa19.8■□□□□ 0.76
CPNE6-213ENST00000559778 CNMDO75829 334 aa19.79■□□□□ 0.76
CPNE6-213ENST00000559778 GLRX3O76003 335 aaKnown RBP19.79■□□□□ 0.76
CPNE6-213ENST00000559778 MBD4O95243 580 aa19.79■□□□□ 0.76
CPNE6-213ENST00000559778 C20orf194Q5TEA3 1177 aa19.79■□□□□ 0.76
CPNE6-213ENST00000559778 ZSCAN25Q6NSZ9 544 aa19.79■□□□□ 0.76
CPNE6-213ENST00000559778 TMEM179Q6ZVK1 233 aa19.79■□□□□ 0.76
CPNE6-213ENST00000559778 LRCH3Q96II8 777 aa19.79■□□□□ 0.76
CPNE6-213ENST00000559778 APBA2Q99767 749 aa19.79■□□□□ 0.76
CPNE6-213ENST00000559778 ZKSCAN1P17029 563 aaPredicted RBP19.78■□□□□ 0.76
CPNE6-213ENST00000559778 BMP8BP34820 402 aa19.78■□□□□ 0.76
CPNE6-213ENST00000559778 MNX1P50219 401 aaPredicted RBP19.78■□□□□ 0.76
CPNE6-213ENST00000559778 AMOTL1Q8IY63 956 aa19.78■□□□□ 0.76
CPNE6-213ENST00000559778 C7orf61Q8IZ16 206 aa19.78■□□□□ 0.76
CPNE6-213ENST00000559778 NBPF3Q9H094 633 aa19.78■□□□□ 0.76
CPNE6-213ENST00000559778 BCL11AQ9H165 835 aa19.78■□□□□ 0.76
CPNE6-213ENST00000559778 MYH4Q9Y623 1939 aa19.77■□□□□ 0.76
CPNE6-213ENST00000559778 SPDYE16A6NNV3 312 aaPredicted RBP19.77■□□□□ 0.76
CPNE6-213ENST00000559778 MPHOSPH10O00566 681 aaKnown RBP19.77■□□□□ 0.76
CPNE6-213ENST00000559778 PRKAR2AP13861 404 aaKnown RBP19.77■□□□□ 0.76
CPNE6-213ENST00000559778 EVX2Q03828 476 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms