RNA–Protein interactions for RNA: ENST00000559550.1

CASC4-210, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-210ENST00000559550 ADAMTS1Q9UHI8 967 aa5.65□□□□□ -1.5
CASC4-210ENST00000559550 TMEM265A0A087WTH1 108 aa5.64□□□□□ -1.51
CASC4-210ENST00000559550 FANCGO15287 622 aa5.64□□□□□ -1.51
CASC4-210ENST00000559550 CILPO75339 1184 aa5.64□□□□□ -1.51
CASC4-210ENST00000559550 LEFTY1O75610 366 aa5.64□□□□□ -1.51
CASC4-210ENST00000559550 GLI1P08151 1106 aa5.64□□□□□ -1.51
CASC4-210ENST00000559550 HOXA5P20719 270 aa5.64□□□□□ -1.51
CASC4-210ENST00000559550 RPL6Q02878 288 aaKnown RBP5.64□□□□□ -1.51
CASC4-210ENST00000559550 PWP1Q13610 501 aa5.64□□□□□ -1.51
CASC4-210ENST00000559550 ZNF394Q53GI3 561 aa5.64□□□□□ -1.51
CASC4-210ENST00000559550 SNAP47Q5SQN1 464 aa5.64□□□□□ -1.51
CASC4-210ENST00000559550 FBXL19Q6PCT2 694 aa5.64□□□□□ -1.51
CASC4-210ENST00000559550 CCDC84Q86UT8 332 aaPredicted RBP5.64□□□□□ -1.51
CASC4-210ENST00000559550 METTL16Q86W50 562 aaKnown RBP5.64□□□□□ -1.51
CASC4-210ENST00000559550 GATAD2BQ8WXI9 593 aa5.64□□□□□ -1.51
CASC4-210ENST00000559550 FBRSQ9HAH7 460 aa5.64□□□□□ -1.51
CASC4-210ENST00000559550 PICK1Q9NRD5 415 aa5.64□□□□□ -1.51
CASC4-210ENST00000559550 METTL5Q9NRN9 209 aaKnown RBP5.64□□□□□ -1.51
CASC4-210ENST00000559550 PCDHGB7Q9Y5F8 929 aa5.64□□□□□ -1.51
CASC4-210ENST00000559550 SNCAIPQ9Y6H5 919 aa5.64□□□□□ -1.51
CASC4-210ENST00000559550 NPIPB6E9PJ23 425 aa5.63□□□□□ -1.51
CASC4-210ENST00000559550 SCAMP3O14828 347 aaKnown RBP5.63□□□□□ -1.51
CASC4-210ENST00000559550 EIF4A3P38919 411 aaKnown RBP5.63□□□□□ -1.51
CASC4-210ENST00000559550 NKG7Q16617 165 aa5.63□□□□□ -1.51
CASC4-210ENST00000559550 C9orf131Q5VYM1 1079 aa5.63□□□□□ -1.51
CASC4-210ENST00000559550 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.63□□□□□ -1.51
CASC4-210ENST00000559550 ZNF296Q8WUU4 475 aaPredicted RBP5.63□□□□□ -1.51
CASC4-210ENST00000559550 WNT10AQ9GZT5 417 aa5.63□□□□□ -1.51
CASC4-210ENST00000559550 SSU72Q9NP77 194 aaKnown RBP5.63□□□□□ -1.51
CASC4-210ENST00000559550 CD320Q9NPF0 282 aa5.63□□□□□ -1.51
CASC4-210ENST00000559550 KCNQ5Q9NR82 932 aa5.63□□□□□ -1.51
CASC4-210ENST00000559550 PCOLCE2Q9UKZ9 415 aa5.63□□□□□ -1.51
CASC4-210ENST00000559550 NFIBO00712 420 aa5.62□□□□□ -1.51
CASC4-210ENST00000559550 GREM1O60565 184 aa5.62□□□□□ -1.51
CASC4-210ENST00000559550 GRK4P32298 578 aa5.62□□□□□ -1.51
CASC4-210ENST00000559550 CRKP46108 304 aa5.62□□□□□ -1.51
CASC4-210ENST00000559550 RBM25P49756 843 aaKnown RBP5.62□□□□□ -1.51
CASC4-210ENST00000559550 ETF1P62495 437 aaKnown RBP5.62□□□□□ -1.51
CASC4-210ENST00000559550 RACK1P63244 317 aaKnown RBP5.62□□□□□ -1.51
CASC4-210ENST00000559550 HDLBPQ00341 1268 aaKnown RBP5.62□□□□□ -1.51
CASC4-210ENST00000559550 FAM196AQ6ZSG2 479 aa5.62□□□□□ -1.51
CASC4-210ENST00000559550 RNF34Q969K3 372 aa5.62□□□□□ -1.51
CASC4-210ENST00000559550 POLR3KQ9Y2Y1 108 aaPredicted RBP5.62□□□□□ -1.51
CASC4-210ENST00000559550 CORINQ9Y5Q5 1042 aa5.62□□□□□ -1.51
CASC4-210ENST00000559550 SNX11Q9Y5W9 270 aa5.62□□□□□ -1.51
CASC4-210ENST00000559550 RBAK-RBAKDNI3L0D1 243 aa5.61□□□□□ -1.51
CASC4-210ENST00000559550 TLR3O15455 904 aaKnown RBP5.61□□□□□ -1.51
CASC4-210ENST00000559550 AFMP43652 599 aa5.61□□□□□ -1.51
CASC4-210ENST00000559550 KRTAP10-2P60368 255 aa5.61□□□□□ -1.51
CASC4-210ENST00000559550 SLBPQ14493 270 aaKnown RBP eCLIP5.61□□□□□ -1.51
CASC4-210ENST00000559550 ARMCX6Q7L4S7 300 aa5.61□□□□□ -1.51
CASC4-210ENST00000559550 USP48Q86UV5 1035 aa5.61□□□□□ -1.51
CASC4-210ENST00000559550 FBXO15Q8NCQ5 510 aaPredicted RBP5.61□□□□□ -1.51
CASC4-210ENST00000559550 DUSP23Q9BVJ7 150 aa5.61□□□□□ -1.51
CASC4-210ENST00000559550 UBP1Q9NZI7 540 aa5.61□□□□□ -1.51
CASC4-210ENST00000559550 DDX41Q9UJV9 622 aaKnown RBP5.61□□□□□ -1.51
CASC4-210ENST00000559550 GRIN3BO60391 1043 aa5.6□□□□□ -1.51
CASC4-210ENST00000559550 BPNT1O95861 308 aa5.6□□□□□ -1.51
CASC4-210ENST00000559550 PGRP06401 933 aa5.6□□□□□ -1.51
CASC4-210ENST00000559550 MED14OSP0DP75 135 aa5.6□□□□□ -1.51
CASC4-210ENST00000559550 ZP2Q05996 745 aa5.6□□□□□ -1.51
CASC4-210ENST00000559550 KCNA10Q16322 511 aa5.6□□□□□ -1.51
CASC4-210ENST00000559550 CDC37L1Q7L3B6 337 aa5.6□□□□□ -1.51
CASC4-210ENST00000559550 FAM214BQ7L5A3 538 aa5.6□□□□□ -1.51
CASC4-210ENST00000559550 NT5DC4Q86YG4 428 aa5.6□□□□□ -1.51
CASC4-210ENST00000559550 ZNF507Q8TCN5 953 aa5.6□□□□□ -1.51
CASC4-210ENST00000559550 C19orf73Q9NVV2 129 aa5.6□□□□□ -1.51
CASC4-210ENST00000559550 SUPT16HQ9Y5B9 1047 aaKnown RBP5.6□□□□□ -1.51
CASC4-210ENST00000559550 TACC3Q9Y6A5 838 aa5.6□□□□□ -1.51
CASC4-210ENST00000559550 MPP2Q14168 576 aa5.59□□□□□ -1.51
CASC4-210ENST00000559550 REC114Q7Z4M0 266 aa5.59□□□□□ -1.51
CASC4-210ENST00000559550 TOP6BLQ8N6T0 577 aa5.59□□□□□ -1.51
CASC4-210ENST00000559550 RELTQ969Z4 430 aa5.59□□□□□ -1.51
CASC4-210ENST00000559550 EAF1Q96JC9 268 aaPredicted RBP5.59□□□□□ -1.51
CASC4-210ENST00000559550 HEXIM2Q96MH2 286 aaKnown RBP5.59□□□□□ -1.51
CASC4-210ENST00000559550 SPON2Q9BUD6 331 aa5.59□□□□□ -1.51
CASC4-210ENST00000559550 TJP2Q9UDY2 1190 aa5.59□□□□□ -1.51
CASC4-210ENST00000559550 DNAJA2O60884 412 aa5.58□□□□□ -1.52
CASC4-210ENST00000559550 SLITRK5O94991 958 aa5.58□□□□□ -1.52
CASC4-210ENST00000559550 PRAMEF13Q5VWM6 474 aa5.58□□□□□ -1.52
CASC4-210ENST00000559550 MPZL3Q6UWV2 235 aa5.58□□□□□ -1.52
CASC4-210ENST00000559550 KIAA0825Q8IV33 1275 aa5.58□□□□□ -1.52
CASC4-210ENST00000559550 HID1Q8IV36 788 aa5.58□□□□□ -1.52
CASC4-210ENST00000559550 KCT2Q8NC54 265 aa5.58□□□□□ -1.52
CASC4-210ENST00000559550 ASB11Q8WXH4 323 aa5.58□□□□□ -1.52
CASC4-210ENST00000559550 ACSF2Q96CM8 615 aaPredicted RBP5.58□□□□□ -1.52
CASC4-210ENST00000559550 KIRREL1Q96J84 757 aa5.58□□□□□ -1.52
CASC4-210ENST00000559550 DPH2Q9BQC3 489 aaPredicted RBP5.58□□□□□ -1.52
CASC4-210ENST00000559550 LRRC3Q9BY71 257 aa5.58□□□□□ -1.52
CASC4-210ENST00000559550 BRMS1Q9HCU9 246 aa5.58□□□□□ -1.52
CASC4-210ENST00000559550 CNTNAP4Q9C0A0 1308 aa5.57□□□□□ -1.52
CASC4-210ENST00000559550 PRR36Q9H6K5 1346 aa5.57□□□□□ -1.52
CASC4-210ENST00000559550 LRIG2O94898 1065 aa5.57□□□□□ -1.52
CASC4-210ENST00000559550 HTR3BO95264 441 aa5.57□□□□□ -1.52
CASC4-210ENST00000559550 PLCG1P19174 1290 aa5.57□□□□□ -1.52
CASC4-210ENST00000559550 ITIH2P19823 946 aa5.57□□□□□ -1.52
CASC4-210ENST00000559550 CAP2P40123 477 aa5.57□□□□□ -1.52
CASC4-210ENST00000559550 RAD51AP2Q09MP3 1159 aa5.57□□□□□ -1.52
CASC4-210ENST00000559550 APOBRQ0VD83 1088 aa5.57□□□□□ -1.52
CASC4-210ENST00000559550 SEZ6Q53EL9 994 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms