RNA–Protein interactions for RNA: ENST00000559494.1

TSPAN3-207, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-207ENST00000559494 CLEC10AQ8IUN9 316 aa24.1■■□□□ 1.45
TSPAN3-207ENST00000559494 SAGE1Q9NXZ1 904 aa24.1■■□□□ 1.45
TSPAN3-207ENST00000559494 CTNNA3Q9UI47 895 aa24.1■■□□□ 1.45
TSPAN3-207ENST00000559494 ALDH1A1P00352 501 aa24.09■■□□□ 1.45
TSPAN3-207ENST00000559494 HMGCS2P54868 508 aa24.09■■□□□ 1.45
TSPAN3-207ENST00000559494 MTMR2Q13614 643 aa24.09■■□□□ 1.45
TSPAN3-207ENST00000559494 GADL1Q6ZQY3 521 aa24.09■■□□□ 1.45
TSPAN3-207ENST00000559494 R3HDMLQ9H3Y0 253 aa24.09■■□□□ 1.45
TSPAN3-207ENST00000559494 A0A1W2PRG0 241 aa24.08■■□□□ 1.44
TSPAN3-207ENST00000559494 C19orf81C9J6K1 198 aa24.08■■□□□ 1.44
TSPAN3-207ENST00000559494 ORC4O43929 436 aa24.08■■□□□ 1.44
TSPAN3-207ENST00000559494 TBC1D8O95759 1140 aa24.08■■□□□ 1.44
TSPAN3-207ENST00000559494 FAM47AQ5JRC9 791 aa24.08■■□□□ 1.44
TSPAN3-207ENST00000559494 ANKRD23Q86SG2 305 aa24.08■■□□□ 1.44
TSPAN3-207ENST00000559494 TBC1D10CQ8IV04 446 aa24.08■■□□□ 1.44
TSPAN3-207ENST00000559494 MAP4K1Q92918 833 aa24.08■■□□□ 1.44
TSPAN3-207ENST00000559494 LSG1Q9H089 658 aaKnown RBP24.08■■□□□ 1.44
TSPAN3-207ENST00000559494 GTF3C3Q9Y5Q9 886 aa24.08■■□□□ 1.44
TSPAN3-207ENST00000559494 HSPA8P11142 646 aaKnown RBP24.07■■□□□ 1.44
TSPAN3-207ENST00000559494 TFAP4Q01664 338 aa24.07■■□□□ 1.44
TSPAN3-207ENST00000559494 AKNAD1Q5T1N1 836 aa24.07■■□□□ 1.44
TSPAN3-207ENST00000559494 NEDD1Q8NHV4 660 aa24.07■■□□□ 1.44
TSPAN3-207ENST00000559494 KANSL2Q9H9L4 492 aa24.07■■□□□ 1.44
TSPAN3-207ENST00000559494 EMILIN3Q9NT22 766 aa24.07■■□□□ 1.44
TSPAN3-207ENST00000559494 IGKV6D-41A0A0C4DH26 115 aa24.06■■□□□ 1.44
TSPAN3-207ENST00000559494 PDHXO00330 501 aa24.06■■□□□ 1.44
TSPAN3-207ENST00000559494 CTCFP49711 727 aaPredicted RBP24.06■■□□□ 1.44
TSPAN3-207ENST00000559494 IMMTQ16891 758 aaKnown RBP24.06■■□□□ 1.44
TSPAN3-207ENST00000559494 TREML2Q5T2D2 321 aa24.06■■□□□ 1.44
TSPAN3-207ENST00000559494 CASC1Q6TDU7 716 aa24.06■■□□□ 1.44
TSPAN3-207ENST00000559494 KIAA1211Q6ZU35 1233 aa24.06■■□□□ 1.44
TSPAN3-207ENST00000559494 PROCA1Q8NCQ7 364 aaPredicted RBP24.06■■□□□ 1.44
TSPAN3-207ENST00000559494 STAG1Q8WVM7 1258 aa24.06■■□□□ 1.44
TSPAN3-207ENST00000559494 CFHR5Q9BXR6 569 aa24.06■■□□□ 1.44
TSPAN3-207ENST00000559494 KIAA1683Q9H0B3 1180 aa24.06■■□□□ 1.44
TSPAN3-207ENST00000559494 ZCCHC17Q9NP64 241 aaKnown RBP24.06■■□□□ 1.44
TSPAN3-207ENST00000559494 U3KPZ7 1027 aaPredicted RBP24.06■■□□□ 1.44
TSPAN3-207ENST00000559494 EEF2P13639 858 aaKnown RBP24.05■■□□□ 1.44
TSPAN3-207ENST00000559494 ICA1Q05084 483 aa24.05■■□□□ 1.44
TSPAN3-207ENST00000559494 ZYXQ15942 572 aaKnown RBP24.05■■□□□ 1.44
TSPAN3-207ENST00000559494 USP17L2Q6R6M4 530 aa24.05■■□□□ 1.44
TSPAN3-207ENST00000559494 MFSD6Q6ZSS7 791 aa24.05■■□□□ 1.44
TSPAN3-207ENST00000559494 NKX2-3Q8TAU0 364 aa24.05■■□□□ 1.44
TSPAN3-207ENST00000559494 GREB1LQ9C091 1923 aaPredicted RBP24.05■■□□□ 1.44
TSPAN3-207ENST00000559494 AGTPBP1Q9UPW5 1226 aa24.05■■□□□ 1.44
TSPAN3-207ENST00000559494 RANBP6O60518 1105 aaKnown RBP24.04■■□□□ 1.44
TSPAN3-207ENST00000559494 TSPY3P0CV98 308 aa24.04■■□□□ 1.44
TSPAN3-207ENST00000559494 TSPY8P0CW00 308 aa24.04■■□□□ 1.44
TSPAN3-207ENST00000559494 LBX1P52954 281 aa24.04■■□□□ 1.44
TSPAN3-207ENST00000559494 CRHR2Q13324 411 aa24.04■■□□□ 1.44
TSPAN3-207ENST00000559494 TAF1CQ15572 869 aaPredicted RBP24.04■■□□□ 1.44
TSPAN3-207ENST00000559494 RRP12Q5JTH9 1297 aaKnown RBP24.04■■□□□ 1.44
TSPAN3-207ENST00000559494 IFFO2Q5TF58 517 aa24.04■■□□□ 1.44
TSPAN3-207ENST00000559494 FEZ1Q99689 392 aa24.04■■□□□ 1.44
TSPAN3-207ENST00000559494 TOMM22Q9NS69 142 aa24.04■■□□□ 1.44
TSPAN3-207ENST00000559494 TMOD4Q9NZQ9 345 aa24.04■■□□□ 1.44
TSPAN3-207ENST00000559494 RBM8AQ9Y5S9 174 aaKnown RBP24.04■■□□□ 1.44
TSPAN3-207ENST00000559494 CYP21A2P08686 494 aa24.03■■□□□ 1.44
TSPAN3-207ENST00000559494 PCP11498 1178 aaKnown RBP24.03■■□□□ 1.44
TSPAN3-207ENST00000559494 USP14P54578 494 aa24.03■■□□□ 1.44
TSPAN3-207ENST00000559494 RNF41Q9H4P4 317 aaPredicted RBP24.03■■□□□ 1.44
TSPAN3-207ENST00000559494 ANO2Q9NQ90 1003 aa24.03■■□□□ 1.44
TSPAN3-207ENST00000559494 MTMR4Q9NYA4 1195 aa24.03■■□□□ 1.44
TSPAN3-207ENST00000559494 NYAP2Q9P242 653 aa24.03■■□□□ 1.44
TSPAN3-207ENST00000559494 TMX2Q9Y320 296 aa24.03■■□□□ 1.44
TSPAN3-207ENST00000559494 TSPY2A6NKD2 308 aa24.02■■□□□ 1.44
TSPAN3-207ENST00000559494 ATP2B2Q01814 1243 aa24.02■■□□□ 1.44
TSPAN3-207ENST00000559494 KIAA1755Q5JYT7 1200 aa24.02■■□□□ 1.44
TSPAN3-207ENST00000559494 CEP95Q96GE4 821 aa24.02■■□□□ 1.44
TSPAN3-207ENST00000559494 C12orf42Q96LP6 360 aa24.02■■□□□ 1.44
TSPAN3-207ENST00000559494 ARHGEF10LQ9HCE6 1279 aa24.02■■□□□ 1.44
TSPAN3-207ENST00000559494 IL17RBQ9NRM6 502 aa24.02■■□□□ 1.44
TSPAN3-207ENST00000559494 SLC45A1Q9Y2W3 748 aa24.02■■□□□ 1.44
TSPAN3-207ENST00000559494 LAMA4Q16363 1823 aa24.01■■□□□ 1.43
TSPAN3-207ENST00000559494 PLIN4Q96Q06 1357 aa24.01■■□□□ 1.43
TSPAN3-207ENST00000559494 NEDD4P46934 1319 aa24.01■■□□□ 1.43
TSPAN3-207ENST00000559494 ZFYVE28Q9HCC9 887 aa24.01■■□□□ 1.43
TSPAN3-207ENST00000559494 CLIP2Q9UDT6 1046 aa24.01■■□□□ 1.43
TSPAN3-207ENST00000559494 TAF6LQ9Y6J9 622 aa24.01■■□□□ 1.43
TSPAN3-207ENST00000559494 NMT2O60551 498 aa24■■□□□ 1.43
TSPAN3-207ENST00000559494 CYP2C8P10632 490 aa24■■□□□ 1.43
TSPAN3-207ENST00000559494 LOC285556D6RIA3 1793 aa24■■□□□ 1.43
TSPAN3-207ENST00000559494 CASP8AP2Q9UKL3 1982 aa24■■□□□ 1.43
TSPAN3-207ENST00000559494 GPR25O00155 361 aa23.99■■□□□ 1.43
TSPAN3-207ENST00000559494 HOXA7P31268 230 aaPredicted RBP23.99■■□□□ 1.43
TSPAN3-207ENST00000559494 MKL1Q969V6 931 aa23.99■■□□□ 1.43
TSPAN3-207ENST00000559494 TLR2O60603 784 aa23.98■■□□□ 1.43
TSPAN3-207ENST00000559494 NECTIN1Q15223 517 aa23.98■■□□□ 1.43
TSPAN3-207ENST00000559494 SH2D4AQ9H788 454 aa23.98■■□□□ 1.43
TSPAN3-207ENST00000559494 VCPKMTQ9H867 229 aa23.98■■□□□ 1.43
TSPAN3-207ENST00000559494 B4E1Z4 1266 aa23.97■■□□□ 1.43
TSPAN3-207ENST00000559494 TTLL1O95922 423 aa23.97■■□□□ 1.43
TSPAN3-207ENST00000559494 VCAM1P19320 739 aa23.97■■□□□ 1.43
TSPAN3-207ENST00000559494 NOVP48745 357 aa23.97■■□□□ 1.43
TSPAN3-207ENST00000559494 PABPC4Q13310 644 aaKnown RBP eCLIP23.97■■□□□ 1.434e-7■■■■□ 24.1
TSPAN3-207ENST00000559494 NOM1Q5C9Z4 860 aaKnown RBP23.97■■□□□ 1.43
TSPAN3-207ENST00000559494 ESR2Q92731 530 aa23.97■■□□□ 1.43
TSPAN3-207ENST00000559494 ASCC2Q9H1I8 757 aaPredicted RBP23.97■■□□□ 1.43
TSPAN3-207ENST00000559494 TCP11L1Q9NUJ3 509 aa23.97■■□□□ 1.43
TSPAN3-207ENST00000559494 ADGRA2Q96PE1 1338 aa23.96■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms