RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 NFXL1Q6ZNB6 911 aa21.2■□□□□ 0.98
CLPX-203ENST00000558958 ZNF274Q96GC6 653 aaPredicted RBP21.2■□□□□ 0.98
CLPX-203ENST00000558958 CABP5Q9NP86 173 aa21.2■□□□□ 0.98
CLPX-203ENST00000558958 SH2B1Q9NRF2 756 aaPredicted RBP21.2■□□□□ 0.98
CLPX-203ENST00000558958 CCDC69A6NI79 296 aa21.2■□□□□ 0.98
CLPX-203ENST00000558958 CTNND1O60716 968 aaKnown RBP21.2■□□□□ 0.98
CLPX-203ENST00000558958 LARGE1O95461 756 aa21.2■□□□□ 0.98
CLPX-203ENST00000558958 SEPT2Q15019 361 aa21.2■□□□□ 0.98
CLPX-203ENST00000558958 APOA5Q6Q788 366 aa21.2■□□□□ 0.98
CLPX-203ENST00000558958 KANSL2Q9H9L4 492 aa21.2■□□□□ 0.98
CLPX-203ENST00000558958 ZBTB21Q9ULJ3 1066 aa21.2■□□□□ 0.98
CLPX-203ENST00000558958 STX8Q9UNK0 236 aa21.2■□□□□ 0.98
CLPX-203ENST00000558958 PDIA3P30101 505 aaKnown RBP21.19■□□□□ 0.98
CLPX-203ENST00000558958 NF2P35240 595 aa21.19■□□□□ 0.98
CLPX-203ENST00000558958 PPP4R3BQ5MIZ7 849 aa21.19■□□□□ 0.98
CLPX-203ENST00000558958 KLRG1Q96E93 195 aa21.19■□□□□ 0.98
CLPX-203ENST00000558958 IPO9Q96P70 1041 aaKnown RBP21.19■□□□□ 0.98
CLPX-203ENST00000558958 GPBP1L1Q9HC44 474 aaPredicted RBP21.19■□□□□ 0.98
CLPX-203ENST00000558958 FZD1Q9UP38 647 aa21.19■□□□□ 0.98
CLPX-203ENST00000558958 SLC12A7Q9Y666 1083 aa21.19■□□□□ 0.98
CLPX-203ENST00000558958 USP2O75604 605 aaPredicted RBP21.18■□□□□ 0.98
CLPX-203ENST00000558958 TTLL1O95922 423 aa21.18■□□□□ 0.98
CLPX-203ENST00000558958 ASNSP08243 561 aa21.18■□□□□ 0.98
CLPX-203ENST00000558958 CLEC10AQ8IUN9 316 aa21.18■□□□□ 0.98
CLPX-203ENST00000558958 WRNIP1Q96S55 665 aa21.18■□□□□ 0.98
CLPX-203ENST00000558958 TMEM47Q9BQJ4 181 aa21.18■□□□□ 0.98
CLPX-203ENST00000558958 GINM1Q9NU53 330 aa21.18■□□□□ 0.98
CLPX-203ENST00000558958 PPP1R12BO60237 982 aaPredicted RBP21.17■□□□□ 0.98
CLPX-203ENST00000558958 PFKFB2O60825 505 aa21.17■□□□□ 0.98
CLPX-203ENST00000558958 INPP5BP32019 993 aa21.17■□□□□ 0.98
CLPX-203ENST00000558958 RAB3GAP1Q15042 981 aa21.17■□□□□ 0.98
CLPX-203ENST00000558958 ZNF654Q8IZM8 581 aa21.17■□□□□ 0.98
CLPX-203ENST00000558958 KAT14Q9H8E8 782 aa21.17■□□□□ 0.98
CLPX-203ENST00000558958 NYAP2Q9P242 653 aa21.17■□□□□ 0.98
CLPX-203ENST00000558958 NAP1L2Q9ULW6 460 aaPredicted RBP21.17■□□□□ 0.98
CLPX-203ENST00000558958 HPS5Q9UPZ3 1129 aa21.17■□□□□ 0.98
CLPX-203ENST00000558958 GOLGA8BA8MQT2 603 aa21.16■□□□□ 0.98
CLPX-203ENST00000558958 TRAF5O00463 557 aa21.16■□□□□ 0.98
CLPX-203ENST00000558958 ZBTB43O43298 467 aa21.16■□□□□ 0.98
CLPX-203ENST00000558958 TOP1P11387 765 aaKnown RBP21.16■□□□□ 0.98
CLPX-203ENST00000558958 SLC4A3P48751 1232 aa21.16■□□□□ 0.98
CLPX-203ENST00000558958 RCAN1P53805 252 aa21.16■□□□□ 0.98
CLPX-203ENST00000558958 ICA1Q05084 483 aa21.16■□□□□ 0.98
CLPX-203ENST00000558958 STK3Q13188 491 aa21.16■□□□□ 0.98
CLPX-203ENST00000558958 CUL4AQ13619 759 aa21.16■□□□□ 0.98
CLPX-203ENST00000558958 PRKG1Q13976 671 aa21.16■□□□□ 0.98
CLPX-203ENST00000558958 CHADLQ6NUI6 762 aa21.16■□□□□ 0.98
CLPX-203ENST00000558958 SYNE3Q6ZMZ3 975 aa21.16■□□□□ 0.98
CLPX-203ENST00000558958 CATIPQ7Z7H3 387 aa21.16■□□□□ 0.98
CLPX-203ENST00000558958 SIAH1Q8IUQ4 282 aa21.16■□□□□ 0.98
CLPX-203ENST00000558958 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.16■□□□□ 0.98
CLPX-203ENST00000558958 SLKQ9H2G2 1235 aaPredicted RBP21.16■□□□□ 0.98
CLPX-203ENST00000558958 CLIP2Q9UDT6 1046 aa21.16■□□□□ 0.98
CLPX-203ENST00000558958 EEF2P13639 858 aaKnown RBP21.15■□□□□ 0.98
CLPX-203ENST00000558958 NECAB1Q8N987 351 aa21.15■□□□□ 0.98
CLPX-203ENST00000558958 PNMA1Q8ND90 353 aa21.15■□□□□ 0.98
CLPX-203ENST00000558958 GTF3C6Q969F1 213 aa21.15■□□□□ 0.98
CLPX-203ENST00000558958 ZKSCAN4Q969J2 545 aaPredicted RBP21.15■□□□□ 0.98
CLPX-203ENST00000558958 MKL1Q969V6 931 aa21.15■□□□□ 0.98
CLPX-203ENST00000558958 MYL10Q9BUA6 226 aa21.15■□□□□ 0.98
CLPX-203ENST00000558958 DDAH1O94760 285 aa21.14■□□□□ 0.98
CLPX-203ENST00000558958 ST3GAL1Q11201 340 aa21.14■□□□□ 0.98
CLPX-203ENST00000558958 TROAPQ12815 778 aa21.14■□□□□ 0.98
CLPX-203ENST00000558958 NOL9Q5SY16 702 aaKnown RBP21.14■□□□□ 0.98
CLPX-203ENST00000558958 MICU3Q86XE3 530 aa21.14■□□□□ 0.98
CLPX-203ENST00000558958 RAB11FIP4Q86YS3 637 aa21.14■□□□□ 0.98
CLPX-203ENST00000558958 SCYL3Q8IZE3 742 aa21.14■□□□□ 0.98
CLPX-203ENST00000558958 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.14■□□□□ 0.98
CLPX-203ENST00000558958 NID2Q14112 1375 aa21.14■□□□□ 0.97
CLPX-203ENST00000558958 RXRAP19793 462 aa21.13■□□□□ 0.97
CLPX-203ENST00000558958 IREB2P48200 963 aaKnown RBP21.13■□□□□ 0.97
CLPX-203ENST00000558958 MAP3K9P80192 1104 aa21.13■□□□□ 0.97
CLPX-203ENST00000558958 FMR1Q06787 632 aaKnown RBP eCLIP21.13■□□□□ 0.975e-7■□□□□ 9.8
CLPX-203ENST00000558958 SCRN1Q12765 414 aa21.13■□□□□ 0.97
CLPX-203ENST00000558958 MAP3K11Q16584 847 aa21.13■□□□□ 0.97
CLPX-203ENST00000558958 DAXXQ9UER7 740 aaPredicted RBP21.13■□□□□ 0.97
CLPX-203ENST00000558958 KIF3CO14782 793 aa21.13■□□□□ 0.97
CLPX-203ENST00000558958 ITGBL1O95965 494 aaPredicted RBP21.13■□□□□ 0.97
CLPX-203ENST00000558958 CALM1P0DP23 149 aa21.13■□□□□ 0.97
CLPX-203ENST00000558958 CALM2P0DP24 149 aa21.13■□□□□ 0.97
CLPX-203ENST00000558958 CALM3P0DP25 149 aa21.13■□□□□ 0.97
CLPX-203ENST00000558958 METAP2P50579 478 aaKnown RBP eCLIP21.13■□□□□ 0.97
CLPX-203ENST00000558958 CCT2P78371 535 aaKnown RBP21.13■□□□□ 0.97
CLPX-203ENST00000558958 ATP2B2Q01814 1243 aa21.13■□□□□ 0.97
CLPX-203ENST00000558958 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.13■□□□□ 0.97
CLPX-203ENST00000558958 CCDC83Q8IWF9 413 aa21.13■□□□□ 0.97
CLPX-203ENST00000558958 NUP133Q8WUM0 1156 aa21.13■□□□□ 0.97
CLPX-203ENST00000558958 NCOA5Q9HCD5 579 aaKnown RBP21.13■□□□□ 0.97
CLPX-203ENST00000558958 ATAD5Q96QE3 1844 aa21.12■□□□□ 0.97
CLPX-203ENST00000558958 GOLGA8AA7E2F4 631 aa21.12■□□□□ 0.97
CLPX-203ENST00000558958 LRRC47Q8N1G4 583 aaKnown RBP21.12■□□□□ 0.97
CLPX-203ENST00000558958 FANCBQ8NB91 859 aa21.12■□□□□ 0.97
CLPX-203ENST00000558958 MAP3K14Q99558 947 aa21.12■□□□□ 0.97
CLPX-203ENST00000558958 ARHGEF10LQ9HCE6 1279 aa21.12■□□□□ 0.97
CLPX-203ENST00000558958 PICK1Q9NRD5 415 aa21.12■□□□□ 0.97
CLPX-203ENST00000558958 SYNPO2Q9UMS6 1093 aa21.12■□□□□ 0.97
CLPX-203ENST00000558958 DOCK1Q14185 1865 aa21.11■□□□□ 0.97
CLPX-203ENST00000558958 A0A1W2PRG0 241 aa21.11■□□□□ 0.97
CLPX-203ENST00000558958 USP17L5A8MUK1 530 aa21.11■□□□□ 0.97
CLPX-203ENST00000558958 TTLL12Q14166 644 aaPredicted RBP21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms