RNA–Protein interactions for RNA: ENST00000558937.1

SMAD6-203, Transcript of SMAD family member 6, humanhuman

TSL 5

Gene SMAD6, Length 632 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-203ENST00000558937 ZSCAN25Q6NSZ9 544 aa18.21■□□□□ 0.51
SMAD6-203ENST00000558937 DYNLL2Q96FJ2 89 aa18.21■□□□□ 0.51
SMAD6-203ENST00000558937 ATP8A2Q9NTI2 1148 aa18.21■□□□□ 0.51
SMAD6-203ENST00000558937 MPHOSPH10O00566 681 aaKnown RBP18.2■□□□□ 0.5
SMAD6-203ENST00000558937 GJA8P48165 433 aa18.2■□□□□ 0.5
SMAD6-203ENST00000558937 GPRC5AQ8NFJ5 357 aa18.2■□□□□ 0.5
SMAD6-203ENST00000558937 NKX2-3Q8TAU0 364 aa18.2■□□□□ 0.5
SMAD6-203ENST00000558937 GTF3C2Q8WUA4 911 aaPredicted RBP18.2■□□□□ 0.5
SMAD6-203ENST00000558937 GPATCH3Q96I76 525 aa18.2■□□□□ 0.5
SMAD6-203ENST00000558937 PAGR1Q9BTK6 254 aa18.2■□□□□ 0.5
SMAD6-203ENST00000558937 RBPJLQ9UBG7 517 aa18.2■□□□□ 0.5
SMAD6-203ENST00000558937 SWAP70Q9UH65 585 aa18.2■□□□□ 0.5
SMAD6-203ENST00000558937 GJD2Q9UKL4 321 aa18.2■□□□□ 0.5
SMAD6-203ENST00000558937 CYP2D7A0A087X1C5 515 aa18.19■□□□□ 0.5
SMAD6-203ENST00000558937 USP17L15C9J2P7 530 aa18.19■□□□□ 0.5
SMAD6-203ENST00000558937 USP17L13C9JLJ4 530 aa18.19■□□□□ 0.5
SMAD6-203ENST00000558937 USP17L11C9JVI0 530 aa18.19■□□□□ 0.5
SMAD6-203ENST00000558937 USP17L18D6R9N7 530 aa18.19■□□□□ 0.5
SMAD6-203ENST00000558937 USP17L22D6RA61 530 aa18.19■□□□□ 0.5
SMAD6-203ENST00000558937 USP17L17D6RBQ6 530 aa18.19■□□□□ 0.5
SMAD6-203ENST00000558937 USP17L19D6RCP7 530 aa18.19■□□□□ 0.5
SMAD6-203ENST00000558937 USP17L20D6RJB6 530 aa18.19■□□□□ 0.5
SMAD6-203ENST00000558937 VCAM1P19320 739 aa18.19■□□□□ 0.5
SMAD6-203ENST00000558937 USP17L24Q0WX57 530 aa18.19■□□□□ 0.5
SMAD6-203ENST00000558937 POTEEQ6S8J3 1075 aa18.19■□□□□ 0.5
SMAD6-203ENST00000558937 PUS7LQ9H0K6 701 aaKnown RBP18.19■□□□□ 0.5
SMAD6-203ENST00000558937 SLC4A4Q9Y6R1 1079 aa18.19■□□□□ 0.5
SMAD6-203ENST00000558937 SMIM22K7EJ46 135 aa18.18■□□□□ 0.5
SMAD6-203ENST00000558937 ERVK-9P63128 1117 aa18.18■□□□□ 0.5
SMAD6-203ENST00000558937 ERVK-24P63145 666 aa18.18■□□□□ 0.5
SMAD6-203ENST00000558937 Q3C1V9 767 aa18.18■□□□□ 0.5
SMAD6-203ENST00000558937 C12orf60Q5U649 245 aa18.18■□□□□ 0.5
SMAD6-203ENST00000558937 KBTBD3Q8NAB2 608 aa18.18■□□□□ 0.5
SMAD6-203ENST00000558937 U2AF1L4Q8WU68 220 aaKnown RBP18.18■□□□□ 0.5
SMAD6-203ENST00000558937 A0A1W2PRG0 241 aa18.17■□□□□ 0.5
SMAD6-203ENST00000558937 USP17L12C9JPN9 530 aa18.17■□□□□ 0.5
SMAD6-203ENST00000558937 USP17L21D6R901 530 aa18.17■□□□□ 0.5
SMAD6-203ENST00000558937 AKR1B1P15121 316 aa18.17■□□□□ 0.5
SMAD6-203ENST00000558937 CATSPERGQ6ZRH7 1159 aa18.17■□□□□ 0.5
SMAD6-203ENST00000558937 TMEM179Q6ZVK1 233 aa18.17■□□□□ 0.5
SMAD6-203ENST00000558937 AMOTL1Q8IY63 956 aa18.17■□□□□ 0.5
SMAD6-203ENST00000558937 DDRGK1Q96HY6 314 aa18.17■□□□□ 0.5
SMAD6-203ENST00000558937 CRBNQ96SW2 442 aa18.17■□□□□ 0.5
SMAD6-203ENST00000558937 PORCNQ9H237 461 aa18.17■□□□□ 0.5
SMAD6-203ENST00000558937 RPAP3Q9H6T3 665 aaPredicted RBP18.17■□□□□ 0.5
SMAD6-203ENST00000558937 CNMDO75829 334 aa18.16■□□□□ 0.5
SMAD6-203ENST00000558937 SLC34A2O95436 690 aa18.16■□□□□ 0.5
SMAD6-203ENST00000558937 HMGCRP04035 888 aa18.16■□□□□ 0.5
SMAD6-203ENST00000558937 MAPK4P31152 587 aa18.16■□□□□ 0.5
SMAD6-203ENST00000558937 CLEC10AQ8IUN9 316 aa18.16■□□□□ 0.5
SMAD6-203ENST00000558937 YTHDC1Q96MU7 727 aaKnown RBP18.16■□□□□ 0.5
SMAD6-203ENST00000558937 RABGAP1Q9Y3P9 1069 aa18.16■□□□□ 0.5
SMAD6-203ENST00000558937 BRCA2P51587 3418 aa18.15■□□□□ 0.5
SMAD6-203ENST00000558937 SPDYE16A6NNV3 312 aaPredicted RBP18.15■□□□□ 0.5
SMAD6-203ENST00000558937 SGPL1O95470 568 aa18.15■□□□□ 0.5
SMAD6-203ENST00000558937 CYP2B6P20813 491 aa18.15■□□□□ 0.5
SMAD6-203ENST00000558937 CDK8P49336 464 aa18.15■□□□□ 0.5
SMAD6-203ENST00000558937 CTR9Q6PD62 1173 aa18.15■□□□□ 0.5
SMAD6-203ENST00000558937 C16orf86Q6ZW13 317 aa18.15■□□□□ 0.5
SMAD6-203ENST00000558937 UBE2Q1Q7Z7E8 422 aa18.15■□□□□ 0.5
SMAD6-203ENST00000558937 OTUD7AQ8TE49 926 aaPredicted RBP18.15■□□□□ 0.5
SMAD6-203ENST00000558937 SOCS4Q8WXH5 440 aa18.15■□□□□ 0.5
SMAD6-203ENST00000558937 TRIB2Q92519 343 aa18.15■□□□□ 0.5
SMAD6-203ENST00000558937 APPBP2Q92624 585 aa18.15■□□□□ 0.5
SMAD6-203ENST00000558937 DEFB118Q96PH6 123 aa18.15■□□□□ 0.5
SMAD6-203ENST00000558937 STRBPQ96SI9 672 aaKnown RBP18.15■□□□□ 0.5
SMAD6-203ENST00000558937 NUDT12Q9BQG2 462 aa18.15■□□□□ 0.5
SMAD6-203ENST00000558937 PAK6Q9NQU5 681 aaPredicted RBP18.15■□□□□ 0.5
SMAD6-203ENST00000558937 TTC41PQ6P2S7 1318 aa18.15■□□□□ 0.5
SMAD6-203ENST00000558937 A0A0G2JMZ2 1700 aa18.15■□□□□ 0.5
SMAD6-203ENST00000558937 RLFQ13129 1914 aa18.14■□□□□ 0.49
SMAD6-203ENST00000558937 RNF113AO15541 343 aaKnown RBP18.14■□□□□ 0.49
SMAD6-203ENST00000558937 FARP2O94887 1054 aaPredicted RBP18.14■□□□□ 0.49
SMAD6-203ENST00000558937 ICA1Q05084 483 aa18.14■□□□□ 0.49
SMAD6-203ENST00000558937 TRIM32Q13049 653 aa18.14■□□□□ 0.49
SMAD6-203ENST00000558937 LBX2Q6XYB7 198 aa18.14■□□□□ 0.49
SMAD6-203ENST00000558937 GPR142Q7Z601 462 aa18.14■□□□□ 0.49
SMAD6-203ENST00000558937 CCAR1Q8IX12 1150 aaKnown RBP18.14■□□□□ 0.49
SMAD6-203ENST00000558937 OSBP2Q969R2 916 aa18.14■□□□□ 0.49
SMAD6-203ENST00000558937 CCDC17Q96LX7 622 aa18.14■□□□□ 0.49
SMAD6-203ENST00000558937 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.14■□□□□ 0.49
SMAD6-203ENST00000558937 ARPP21Q9UBL0 812 aaPredicted RBP18.14■□□□□ 0.49
SMAD6-203ENST00000558937 PLEKHH3Q7Z736 793 aa18.13■□□□□ 0.49
SMAD6-203ENST00000558937 PI4K2BQ8TCG2 481 aa18.13■□□□□ 0.49
SMAD6-203ENST00000558937 BTBD7Q9P203 1132 aa18.13■□□□□ 0.49
SMAD6-203ENST00000558937 GREB1LQ9C091 1923 aaPredicted RBP18.13■□□□□ 0.49
SMAD6-203ENST00000558937 MKI67P46013 3256 aaKnown RBP18.12■□□□□ 0.49
SMAD6-203ENST00000558937 PARP14Q460N5 1801 aa18.12■□□□□ 0.49
SMAD6-203ENST00000558937 GSG1L2A8MUP6 293 aa18.12■□□□□ 0.49
SMAD6-203ENST00000558937 ERC2O15083 957 aa18.12■□□□□ 0.49
SMAD6-203ENST00000558937 ZFYP08048 801 aaPredicted RBP18.12■□□□□ 0.49
SMAD6-203ENST00000558937 CCNA1P78396 465 aa18.12■□□□□ 0.49
SMAD6-203ENST00000558937 KIAA1755Q5JYT7 1200 aa18.12■□□□□ 0.49
SMAD6-203ENST00000558937 MORN1Q5T089 497 aa18.12■□□□□ 0.49
SMAD6-203ENST00000558937 SIAH1Q8IUQ4 282 aa18.12■□□□□ 0.49
SMAD6-203ENST00000558937 USP6NLQ92738 828 aa18.12■□□□□ 0.49
SMAD6-203ENST00000558937 GCC1Q96CN9 775 aa18.12■□□□□ 0.49
SMAD6-203ENST00000558937 TANGO6Q9C0B7 1094 aa18.12■□□□□ 0.49
SMAD6-203ENST00000558937 CRISPLD2Q9H0B8 497 aa18.12■□□□□ 0.49
SMAD6-203ENST00000558937 ARHGEF10LQ9HCE6 1279 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms