RNA–Protein interactions for RNA: ENST00000558917.1

AC090888.3-201, humanhuman

BASIC

Gene AC090888.3, Length 509 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC090888.3-201ENST00000558917 GDPD2Q9HCC8 539 aa8.71□□□□□ -1.02
AC090888.3-201ENST00000558917 USP16Q9Y5T5 823 aa8.71□□□□□ -1.02
AC090888.3-201ENST00000558917 TAF1P21675 1872 aa8.7□□□□□ -1.02
AC090888.3-201ENST00000558917 MUC6Q6W4X9 2439 aa8.7□□□□□ -1.02
AC090888.3-201ENST00000558917 SEMA3FQ13275 785 aa8.7□□□□□ -1.02
AC090888.3-201ENST00000558917 DOC2BQ14184 412 aa8.7□□□□□ -1.02
AC090888.3-201ENST00000558917 LRIT3Q3SXY7 679 aa8.7□□□□□ -1.02
AC090888.3-201ENST00000558917 SULT6B1Q6IMI4 303 aa8.7□□□□□ -1.02
AC090888.3-201ENST00000558917 RPGRQ92834 1020 aaKnown RBP8.7□□□□□ -1.02
AC090888.3-201ENST00000558917 AVENQ9NQS1 362 aaPredicted RBP8.7□□□□□ -1.02
AC090888.3-201ENST00000558917 FZD1Q9UP38 647 aa8.7□□□□□ -1.02
AC090888.3-201ENST00000558917 SYNGAP1Q96PV0 1343 aa8.7□□□□□ -1.02
AC090888.3-201ENST00000558917 ZNF646O15015 1829 aaPredicted RBP8.7□□□□□ -1.02
AC090888.3-201ENST00000558917 LAMB1P07942 1786 aa8.69□□□□□ -1.02
AC090888.3-201ENST00000558917 TMEM229AB2RXF0 380 aa8.69□□□□□ -1.02
AC090888.3-201ENST00000558917 CDK2AP1O14519 115 aa8.69□□□□□ -1.02
AC090888.3-201ENST00000558917 MAP3K12Q12852 859 aa8.69□□□□□ -1.02
AC090888.3-201ENST00000558917 PTPN18Q99952 460 aa8.69□□□□□ -1.02
AC090888.3-201ENST00000558917 SEMA6BQ9H3T3 888 aa8.69□□□□□ -1.02
AC090888.3-201ENST00000558917 DBNDD1Q9H9R9 158 aa8.69□□□□□ -1.02
AC090888.3-201ENST00000558917 ZDHHC3Q9NYG2 299 aa8.69□□□□□ -1.02
AC090888.3-201ENST00000558917 NR2E3Q9Y5X4 410 aa8.69□□□□□ -1.02
AC090888.3-201ENST00000558917 USP3Q9Y6I4 520 aa8.69□□□□□ -1.02
AC090888.3-201ENST00000558917 SSC5DA1L4H1 1573 aa8.69□□□□□ -1.02
AC090888.3-201ENST00000558917 FAM157BP0CG42 384 aa8.68□□□□□ -1.02
AC090888.3-201ENST00000558917 BMP8BP34820 402 aa8.68□□□□□ -1.02
AC090888.3-201ENST00000558917 SP3Q02447 781 aa8.68□□□□□ -1.02
AC090888.3-201ENST00000558917 WASHC4Q2M389 1173 aa8.68□□□□□ -1.02
AC090888.3-201ENST00000558917 LDLRAD1Q5T700 205 aa8.68□□□□□ -1.02
AC090888.3-201ENST00000558917 ZNF468Q5VIY5 522 aaPredicted RBP8.68□□□□□ -1.02
AC090888.3-201ENST00000558917 ZNF790Q6PG37 636 aa8.68□□□□□ -1.02
AC090888.3-201ENST00000558917 DPP8Q6V1X1 898 aaPredicted RBP8.68□□□□□ -1.02
AC090888.3-201ENST00000558917 RBM17Q96I25 401 aaKnown RBP8.68□□□□□ -1.02
AC090888.3-201ENST00000558917 PLVAPQ9BX97 442 aa8.68□□□□□ -1.02
AC090888.3-201ENST00000558917 ARHGAP39Q9C0H5 1083 aa8.68□□□□□ -1.02
AC090888.3-201ENST00000558917 MARK1Q9P0L2 795 aa8.68□□□□□ -1.02
AC090888.3-201ENST00000558917 IQSEC3Q9UPP2 1182 aaPredicted RBP8.68□□□□□ -1.02
AC090888.3-201ENST00000558917 ABCC4O15439 1325 aa8.68□□□□□ -1.02
AC090888.3-201ENST00000558917 UBN2Q6ZU65 1347 aa8.68□□□□□ -1.02
AC090888.3-201ENST00000558917 SIPA1L3O60292 1781 aaPredicted RBP8.68□□□□□ -1.02
AC090888.3-201ENST00000558917 TMEM265A0A087WTH1 108 aa8.67□□□□□ -1.02
AC090888.3-201ENST00000558917 ZNF280AP59817 542 aaPredicted RBP8.67□□□□□ -1.02
AC090888.3-201ENST00000558917 NBPF11Q86T75 865 aa8.67□□□□□ -1.02
AC090888.3-201ENST00000558917 ZNF295-AS1Q8N0V1 137 aa8.67□□□□□ -1.02
AC090888.3-201ENST00000558917 SUPT20HQ8NEM7 779 aa8.67□□□□□ -1.02
AC090888.3-201ENST00000558917 TRIM11Q96F44 468 aa8.67□□□□□ -1.02
AC090888.3-201ENST00000558917 FAM161BQ96MY7 647 aa8.67□□□□□ -1.02
AC090888.3-201ENST00000558917 HTATIP2Q9BUP3 242 aa8.67□□□□□ -1.02
AC090888.3-201ENST00000558917 TEX13AQ9BXU3 409 aaPredicted RBP8.67□□□□□ -1.02
AC090888.3-201ENST00000558917 ZNF652Q9Y2D9 606 aa8.67□□□□□ -1.02
AC090888.3-201ENST00000558917 COL4A1P02462 1669 aa8.66□□□□□ -1.02
AC090888.3-201ENST00000558917 RPS12P25398 132 aaKnown RBP8.66□□□□□ -1.02
AC090888.3-201ENST00000558917 MTHFSDQ2M296 383 aaKnown RBP8.66□□□□□ -1.02
AC090888.3-201ENST00000558917 SUSD4Q5VX71 490 aa8.66□□□□□ -1.02
AC090888.3-201ENST00000558917 SP8Q8IXZ3 490 aa8.66□□□□□ -1.02
AC090888.3-201ENST00000558917 TTC5Q8N0Z6 440 aa8.66□□□□□ -1.02
AC090888.3-201ENST00000558917 CLMNQ96JQ2 1002 aa8.66□□□□□ -1.02
AC090888.3-201ENST00000558917 MANSC4A6NHS7 340 aaPredicted RBP8.65□□□□□ -1.02
AC090888.3-201ENST00000558917 NTSR2O95665 410 aa8.65□□□□□ -1.02
AC090888.3-201ENST00000558917 VIL1P09327 827 aaKnown RBP8.65□□□□□ -1.02
AC090888.3-201ENST00000558917 SPATA31C1P0DKV0 1188 aa8.65□□□□□ -1.02
AC090888.3-201ENST00000558917 ALAS2P22557 587 aa8.65□□□□□ -1.02
AC090888.3-201ENST00000558917 IL13P35225 146 aa8.65□□□□□ -1.02
AC090888.3-201ENST00000558917 GATA4P43694 442 aa8.65□□□□□ -1.02
AC090888.3-201ENST00000558917 GJA8P48165 433 aa8.65□□□□□ -1.02
AC090888.3-201ENST00000558917 PRKG1Q13976 671 aa8.65□□□□□ -1.02
AC090888.3-201ENST00000558917 IL17REQ8NFR9 667 aa8.65□□□□□ -1.02
AC090888.3-201ENST00000558917 NUP98P52948 1817 aa8.64□□□□□ -1.03
AC090888.3-201ENST00000558917 IRS2Q9Y4H2 1338 aa8.64□□□□□ -1.03
AC090888.3-201ENST00000558917 ELOA3CA0A087WX78 387 aaPredicted RBP8.64□□□□□ -1.03
AC090888.3-201ENST00000558917 ELOA3DA6NLF2 546 aaPredicted RBP8.64□□□□□ -1.03
AC090888.3-201ENST00000558917 BACH1O14867 736 aa8.64□□□□□ -1.03
AC090888.3-201ENST00000558917 FARP2O94887 1054 aaPredicted RBP8.64□□□□□ -1.03
AC090888.3-201ENST00000558917 GPTP24298 496 aa8.64□□□□□ -1.03
AC090888.3-201ENST00000558917 CTGFP29279 349 aa8.64□□□□□ -1.03
AC090888.3-201ENST00000558917 NBPF9Q3BBW0 867 aa8.64□□□□□ -1.03
AC090888.3-201ENST00000558917 ELOA3BQ3SY89 546 aa8.64□□□□□ -1.03
AC090888.3-201ENST00000558917 ELOA3Q8NG57 546 aa8.64□□□□□ -1.03
AC090888.3-201ENST00000558917 WNK4Q96J92 1243 aa8.64□□□□□ -1.03
AC090888.3-201ENST00000558917 GMLQ99445 158 aa8.64□□□□□ -1.03
AC090888.3-201ENST00000558917 ZMYND8Q9ULU4 1186 aaPredicted RBP8.64□□□□□ -1.03
AC090888.3-201ENST00000558917 PCDHGA11Q9Y5H2 935 aa8.64□□□□□ -1.03
AC090888.3-201ENST00000558917 LAMB2P55268 1798 aa8.63□□□□□ -1.03
AC090888.3-201ENST00000558917 LRRC37AA6NMS7 1700 aa8.63□□□□□ -1.03
AC090888.3-201ENST00000558917 PIK3CDO00329 1044 aa8.63□□□□□ -1.03
AC090888.3-201ENST00000558917 ECE2O60344 883 aa8.63□□□□□ -1.03
AC090888.3-201ENST00000558917 GJB1P08034 283 aa8.63□□□□□ -1.03
AC090888.3-201ENST00000558917 ITGB7P26010 798 aa8.63□□□□□ -1.03
AC090888.3-201ENST00000558917 SOX11P35716 441 aa8.63□□□□□ -1.03
AC090888.3-201ENST00000558917 TXLNAP40222 546 aa8.63□□□□□ -1.03
AC090888.3-201ENST00000558917 MAGEA10P43363 369 aaPredicted RBP8.63□□□□□ -1.03
AC090888.3-201ENST00000558917 EML3Q32P44 896 aa8.63□□□□□ -1.03
AC090888.3-201ENST00000558917 SAMD5Q5TGI4 173 aa8.63□□□□□ -1.03
AC090888.3-201ENST00000558917 SYT9Q86SS6 491 aa8.63□□□□□ -1.03
AC090888.3-201ENST00000558917 TDHQ8IZJ6 230 aa8.63□□□□□ -1.03
AC090888.3-201ENST00000558917 MAFAQ8NHW3 353 aaPredicted RBP8.63□□□□□ -1.03
AC090888.3-201ENST00000558917 FMNL2Q96PY5 1086 aa8.63□□□□□ -1.03
AC090888.3-201ENST00000558917 NYXQ9GZU5 481 aa8.63□□□□□ -1.03
AC090888.3-201ENST00000558917 POLLQ9UGP5 575 aa8.63□□□□□ -1.03
AC090888.3-201ENST00000558917 DNAH12Q6ZR08 3092 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms