RNA–Protein interactions for RNA: ENST00000558894.5

SMAD3-209, Transcript of SMAD family member 3, humanhuman

TSL 5

Gene SMAD3, Length 797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-209ENST00000558894 KIAA1755Q5JYT7 1200 aa6.74□□□□□ -1.33
SMAD3-209ENST00000558894 MAP3K21Q5TCX8 1036 aa6.74□□□□□ -1.33
SMAD3-209ENST00000558894 CERS3Q8IU89 383 aa6.74□□□□□ -1.33
SMAD3-209ENST00000558894 CLASRPQ8N2M8 674 aaKnown RBP6.74□□□□□ -1.33
SMAD3-209ENST00000558894 CRACR2BQ8N4Y2 399 aaPredicted RBP6.74□□□□□ -1.33
SMAD3-209ENST00000558894 ACER1Q8TDN7 264 aa6.74□□□□□ -1.33
SMAD3-209ENST00000558894 U2AF1L4Q8WU68 220 aaKnown RBP6.74□□□□□ -1.33
SMAD3-209ENST00000558894 SDR42E1Q8WUS8 393 aa6.74□□□□□ -1.33
SMAD3-209ENST00000558894 TRIB2Q92519 343 aa6.74□□□□□ -1.33
SMAD3-209ENST00000558894 HAUS7Q99871 368 aa6.74□□□□□ -1.33
SMAD3-209ENST00000558894 RNF208Q9H0X6 261 aa6.74□□□□□ -1.33
SMAD3-209ENST00000558894 PORCNQ9H237 461 aa6.74□□□□□ -1.33
SMAD3-209ENST00000558894 PRO3102Q9H379 93 aa6.74□□□□□ -1.33
SMAD3-209ENST00000558894 DCTPP1Q9H773 170 aa6.74□□□□□ -1.33
SMAD3-209ENST00000558894 ARMT1Q9H993 441 aa6.74□□□□□ -1.33
SMAD3-209ENST00000558894 DCP1AQ9NPI6 582 aaPredicted RBP6.74□□□□□ -1.33
SMAD3-209ENST00000558894 PNMA3Q9UL41 463 aa6.74□□□□□ -1.33
SMAD3-209ENST00000558894 CACNA1AO00555 2505 aa6.74□□□□□ -1.33
SMAD3-209ENST00000558894 LAMA3Q16787 3333 aa6.73□□□□□ -1.33
SMAD3-209ENST00000558894 H0YGN5 161 aa6.73□□□□□ -1.33
SMAD3-209ENST00000558894 HMMRO75330 724 aa6.73□□□□□ -1.33
SMAD3-209ENST00000558894 HLA-DOAP06340 250 aa6.73□□□□□ -1.33
SMAD3-209ENST00000558894 IFIT2P09913 472 aaKnown RBP6.73□□□□□ -1.33
SMAD3-209ENST00000558894 USP5P45974 858 aa6.73□□□□□ -1.33
SMAD3-209ENST00000558894 FXR1P51114 621 aaKnown RBP eCLIP6.73□□□□□ -1.33
SMAD3-209ENST00000558894 PABPC4Q13310 644 aaKnown RBP eCLIP6.73□□□□□ -1.33
SMAD3-209ENST00000558894 SEPT2Q15019 361 aa6.73□□□□□ -1.33
SMAD3-209ENST00000558894 ABCB5Q2M3G0 1257 aa6.73□□□□□ -1.33
SMAD3-209ENST00000558894 CERKLQ49MI3 558 aaPredicted RBP6.73□□□□□ -1.33
SMAD3-209ENST00000558894 MORN1Q5T089 497 aa6.73□□□□□ -1.33
SMAD3-209ENST00000558894 USP17L2Q6R6M4 530 aa6.73□□□□□ -1.33
SMAD3-209ENST00000558894 LBX2Q6XYB7 198 aa6.73□□□□□ -1.33
SMAD3-209ENST00000558894 CATSPERGQ6ZRH7 1159 aa6.73□□□□□ -1.33
SMAD3-209ENST00000558894 TTC6Q86TZ1 520 aa6.73□□□□□ -1.33
SMAD3-209ENST00000558894 SLC44A5Q8NCS7 719 aa6.73□□□□□ -1.33
SMAD3-209ENST00000558894 DNAJC2Q99543 621 aaKnown RBP6.73□□□□□ -1.33
SMAD3-209ENST00000558894 KIAA1683Q9H0B3 1180 aa6.73□□□□□ -1.33
SMAD3-209ENST00000558894 BOLA2Q9H3K6 86 aa6.73□□□□□ -1.33
SMAD3-209ENST00000558894 PAG1Q9NWQ8 432 aa6.73□□□□□ -1.33
SMAD3-209ENST00000558894 BTBD7Q9P203 1132 aa6.73□□□□□ -1.33
SMAD3-209ENST00000558894 COLQQ9Y215 455 aaPredicted RBP6.73□□□□□ -1.33
SMAD3-209ENST00000558894 DNAH12Q6ZR08 3092 aa6.72□□□□□ -1.33
SMAD3-209ENST00000558894 SPTBN5Q9NRC6 3674 aaKnown RBP6.72□□□□□ -1.33
SMAD3-209ENST00000558894 CYP2D7A0A087X1C5 515 aa6.72□□□□□ -1.33
SMAD3-209ENST00000558894 VCAM1P19320 739 aa6.72□□□□□ -1.33
SMAD3-209ENST00000558894 ERVK-9P63128 1117 aa6.72□□□□□ -1.33
SMAD3-209ENST00000558894 ERVK-24P63145 666 aa6.72□□□□□ -1.33
SMAD3-209ENST00000558894 UBXN2AP68543 259 aa6.72□□□□□ -1.33
SMAD3-209ENST00000558894 UBE3CQ15386 1083 aa6.72□□□□□ -1.33
SMAD3-209ENST00000558894 C12orf60Q5U649 245 aa6.72□□□□□ -1.33
SMAD3-209ENST00000558894 SLC17A8Q8NDX2 589 aa6.72□□□□□ -1.33
SMAD3-209ENST00000558894 GPRC5AQ8NFJ5 357 aa6.72□□□□□ -1.33
SMAD3-209ENST00000558894 NKX2-3Q8TAU0 364 aa6.72□□□□□ -1.33
SMAD3-209ENST00000558894 COA7Q96BR5 231 aa6.72□□□□□ -1.33
SMAD3-209ENST00000558894 DYNLL2Q96FJ2 89 aa6.72□□□□□ -1.33
SMAD3-209ENST00000558894 DEFB118Q96PH6 123 aa6.72□□□□□ -1.33
SMAD3-209ENST00000558894 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.72□□□□□ -1.33
SMAD3-209ENST00000558894 LRRCC1Q9C099 1032 aa6.72□□□□□ -1.33
SMAD3-209ENST00000558894 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.72□□□□□ -1.33
SMAD3-209ENST00000558894 PUS7LQ9H0K6 701 aaKnown RBP6.72□□□□□ -1.33
SMAD3-209ENST00000558894 MCM9Q9NXL9 1143 aa6.72□□□□□ -1.33
SMAD3-209ENST00000558894 TMOD4Q9NZQ9 345 aa6.72□□□□□ -1.33
SMAD3-209ENST00000558894 PCDHB15Q9Y5E8 787 aa6.72□□□□□ -1.33
SMAD3-209ENST00000558894 SALL3Q9BXA9 1300 aa6.72□□□□□ -1.33
SMAD3-209ENST00000558894 LTBP2Q14767 1821 aa6.71□□□□□ -1.33
SMAD3-209ENST00000558894 SPDYE16A6NNV3 312 aaPredicted RBP6.71□□□□□ -1.34
SMAD3-209ENST00000558894 USP17L15C9J2P7 530 aa6.71□□□□□ -1.34
SMAD3-209ENST00000558894 USP17L13C9JLJ4 530 aa6.71□□□□□ -1.34
SMAD3-209ENST00000558894 USP17L11C9JVI0 530 aa6.71□□□□□ -1.34
SMAD3-209ENST00000558894 USP17L18D6R9N7 530 aa6.71□□□□□ -1.34
SMAD3-209ENST00000558894 USP17L22D6RA61 530 aa6.71□□□□□ -1.34
SMAD3-209ENST00000558894 USP17L17D6RBQ6 530 aa6.71□□□□□ -1.34
SMAD3-209ENST00000558894 USP17L19D6RCP7 530 aa6.71□□□□□ -1.34
SMAD3-209ENST00000558894 USP17L20D6RJB6 530 aa6.71□□□□□ -1.34
SMAD3-209ENST00000558894 MBD4O95243 580 aa6.71□□□□□ -1.34
SMAD3-209ENST00000558894 HMGCRP04035 888 aa6.71□□□□□ -1.34
SMAD3-209ENST00000558894 XRCC5P13010 732 aaKnown RBP6.71□□□□□ -1.34
SMAD3-209ENST00000558894 AKR1B1P15121 316 aa6.71□□□□□ -1.34
SMAD3-209ENST00000558894 CYP2B6P20813 491 aa6.71□□□□□ -1.34
SMAD3-209ENST00000558894 USP17L24Q0WX57 530 aa6.71□□□□□ -1.34
SMAD3-209ENST00000558894 RAB3GAP1Q15042 981 aa6.71□□□□□ -1.34
SMAD3-209ENST00000558894 ZYXQ15942 572 aaKnown RBP6.71□□□□□ -1.34
SMAD3-209ENST00000558894 CCL14Q16627 93 aa6.71□□□□□ -1.34
SMAD3-209ENST00000558894 LHX8Q68G74 356 aa6.71□□□□□ -1.34
SMAD3-209ENST00000558894 GPR142Q7Z601 462 aa6.71□□□□□ -1.34
SMAD3-209ENST00000558894 CLEC10AQ8IUN9 316 aa6.71□□□□□ -1.34
SMAD3-209ENST00000558894 DIS3LQ8TF46 1054 aaKnown RBP6.71□□□□□ -1.34
SMAD3-209ENST00000558894 TRIM34Q9BYJ4 488 aa6.71□□□□□ -1.34
SMAD3-209ENST00000558894 CRNKL1Q9BZJ0 848 aaKnown RBP6.71□□□□□ -1.34
SMAD3-209ENST00000558894 FLRT1Q9NZU1 646 aa6.71□□□□□ -1.34
SMAD3-209ENST00000558894 RABGAP1Q9Y3P9 1069 aa6.71□□□□□ -1.34
SMAD3-209ENST00000558894 RPTORQ8N122 1335 aa6.71□□□□□ -1.34
SMAD3-209ENST00000558894 SMCHD1A6NHR9 2005 aa6.71□□□□□ -1.34
SMAD3-209ENST00000558894 TRIOBPQ9H2D6 2365 aa6.71□□□□□ -1.34
SMAD3-209ENST00000558894 LCTP09848 1927 aa6.7□□□□□ -1.34
SMAD3-209ENST00000558894 GSG1L2A8MUP6 293 aa6.7□□□□□ -1.34
SMAD3-209ENST00000558894 USP17L12C9JPN9 530 aa6.7□□□□□ -1.34
SMAD3-209ENST00000558894 USP17L21D6R901 530 aa6.7□□□□□ -1.34
SMAD3-209ENST00000558894 FARP2O94887 1054 aaPredicted RBP6.7□□□□□ -1.34
SMAD3-209ENST00000558894 POLR3DP05423 398 aaPredicted RBP6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms