RNA–Protein interactions for RNA: ENST00000558879.5

LRRC28-210, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4 BASIC

Gene LRRC28, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-210ENST00000558879 PI4K2BQ8TCG2 481 aa20.5■□□□□ 0.87
LRRC28-210ENST00000558879 ACER1Q8TDN7 264 aa20.5■□□□□ 0.87
LRRC28-210ENST00000558879 SHISA4Q96DD7 197 aa20.5■□□□□ 0.87
LRRC28-210ENST00000558879 P2RX7Q99572 595 aaKnown RBP20.5■□□□□ 0.87
LRRC28-210ENST00000558879 FEZ1Q99689 392 aa20.5■□□□□ 0.87
LRRC28-210ENST00000558879 TXNRD2Q9NNW7 524 aa20.5■□□□□ 0.87
LRRC28-210ENST00000558879 CABP5Q9NP86 173 aa20.5■□□□□ 0.87
LRRC28-210ENST00000558879 ZNFX1Q9P2E3 1918 aaKnown RBP20.5■□□□□ 0.87
LRRC28-210ENST00000558879 ADCY3O60266 1144 aa20.49■□□□□ 0.87
LRRC28-210ENST00000558879 MYCP01106 439 aaPredicted RBP20.49■□□□□ 0.87
LRRC28-210ENST00000558879 VCAM1P19320 739 aa20.49■□□□□ 0.87
LRRC28-210ENST00000558879 USP14P54578 494 aa20.49■□□□□ 0.87
LRRC28-210ENST00000558879 SEPT2Q15019 361 aa20.49■□□□□ 0.87
LRRC28-210ENST00000558879 C12orf60Q5U649 245 aa20.49■□□□□ 0.87
LRRC28-210ENST00000558879 GTF3C2Q8WUA4 911 aaPredicted RBP20.49■□□□□ 0.87
LRRC28-210ENST00000558879 COA7Q96BR5 231 aa20.49■□□□□ 0.87
LRRC28-210ENST00000558879 ROBO3Q96MS0 1386 aa20.48■□□□□ 0.87
LRRC28-210ENST00000558879 SMIM22K7EJ46 135 aa20.48■□□□□ 0.87
LRRC28-210ENST00000558879 UBXN2AP68543 259 aa20.48■□□□□ 0.87
LRRC28-210ENST00000558879 ZYXQ15942 572 aaKnown RBP20.48■□□□□ 0.87
LRRC28-210ENST00000558879 APPBP2Q92624 585 aa20.48■□□□□ 0.87
LRRC28-210ENST00000558879 DYNLL2Q96FJ2 89 aa20.48■□□□□ 0.87
LRRC28-210ENST00000558879 SLC4A4Q9Y6R1 1079 aa20.48■□□□□ 0.87
LRRC28-210ENST00000558879 CYP2D7A0A087X1C5 515 aa20.47■□□□□ 0.87
LRRC28-210ENST00000558879 CCL5P13501 91 aa20.47■□□□□ 0.87
LRRC28-210ENST00000558879 ELNP15502 786 aa20.47■□□□□ 0.87
LRRC28-210ENST00000558879 TMEM179Q6ZVK1 233 aa20.47■□□□□ 0.87
LRRC28-210ENST00000558879 C16orf86Q6ZW13 317 aa20.47■□□□□ 0.87
LRRC28-210ENST00000558879 OTUD7AQ8TE49 926 aaPredicted RBP20.47■□□□□ 0.87
LRRC28-210ENST00000558879 YTHDC1Q96MU7 727 aaKnown RBP20.47■□□□□ 0.87
LRRC28-210ENST00000558879 RBPJLQ9UBG7 517 aa20.47■□□□□ 0.87
LRRC28-210ENST00000558879 GJD2Q9UKL4 321 aa20.47■□□□□ 0.87
LRRC28-210ENST00000558879 PLXNA1Q9UIW2 1896 aa20.46■□□□□ 0.87
LRRC28-210ENST00000558879 A0A1W2PRG0 241 aa20.46■□□□□ 0.87
LRRC28-210ENST00000558879 USP17L12C9JPN9 530 aa20.46■□□□□ 0.87
LRRC28-210ENST00000558879 USP17L21D6R901 530 aa20.46■□□□□ 0.87
LRRC28-210ENST00000558879 PEX10O60683 326 aa20.46■□□□□ 0.87
LRRC28-210ENST00000558879 ZFYP08048 801 aaPredicted RBP20.46■□□□□ 0.87
LRRC28-210ENST00000558879 ERVK-9P63128 1117 aa20.46■□□□□ 0.87
LRRC28-210ENST00000558879 ERVK-24P63145 666 aa20.46■□□□□ 0.87
LRRC28-210ENST00000558879 LBX2Q6XYB7 198 aa20.46■□□□□ 0.87
LRRC28-210ENST00000558879 OSBP2Q969R2 916 aa20.46■□□□□ 0.87
LRRC28-210ENST00000558879 STRBPQ96SI9 672 aaKnown RBP20.46■□□□□ 0.87
LRRC28-210ENST00000558879 ARPP21Q9UBL0 812 aaPredicted RBP20.46■□□□□ 0.87
LRRC28-210ENST00000558879 USP17L15C9J2P7 530 aa20.45■□□□□ 0.86
LRRC28-210ENST00000558879 USP17L13C9JLJ4 530 aa20.45■□□□□ 0.86
LRRC28-210ENST00000558879 USP17L11C9JVI0 530 aa20.45■□□□□ 0.86
LRRC28-210ENST00000558879 USP17L18D6R9N7 530 aa20.45■□□□□ 0.86
LRRC28-210ENST00000558879 USP17L22D6RA61 530 aa20.45■□□□□ 0.86
LRRC28-210ENST00000558879 USP17L17D6RBQ6 530 aa20.45■□□□□ 0.86
LRRC28-210ENST00000558879 USP17L19D6RCP7 530 aa20.45■□□□□ 0.86
LRRC28-210ENST00000558879 USP17L20D6RJB6 530 aa20.45■□□□□ 0.86
LRRC28-210ENST00000558879 INHAP05111 366 aa20.45■□□□□ 0.86
LRRC28-210ENST00000558879 GJB1P08034 283 aa20.45■□□□□ 0.86
LRRC28-210ENST00000558879 AKR1B1P15121 316 aa20.45■□□□□ 0.86
LRRC28-210ENST00000558879 GJA8P48165 433 aa20.45■□□□□ 0.86
LRRC28-210ENST00000558879 USP17L24Q0WX57 530 aa20.45■□□□□ 0.86
LRRC28-210ENST00000558879 HDAC1Q13547 482 aaPredicted RBP20.45■□□□□ 0.86
LRRC28-210ENST00000558879 CTR9Q6PD62 1173 aa20.45■□□□□ 0.86
LRRC28-210ENST00000558879 CATSPERGQ6ZRH7 1159 aa20.45■□□□□ 0.86
LRRC28-210ENST00000558879 GPRC5AQ8NFJ5 357 aa20.45■□□□□ 0.86
LRRC28-210ENST00000558879 GSG1L2A8MUP6 293 aa20.44■□□□□ 0.86
LRRC28-210ENST00000558879 MPHOSPH10O00566 681 aaKnown RBP20.44■□□□□ 0.86
LRRC28-210ENST00000558879 ERC2O15083 957 aa20.44■□□□□ 0.86
LRRC28-210ENST00000558879 RNF113AO15541 343 aaKnown RBP20.44■□□□□ 0.86
LRRC28-210ENST00000558879 CNMDO75829 334 aa20.44■□□□□ 0.86
LRRC28-210ENST00000558879 GLRX3O76003 335 aaKnown RBP20.44■□□□□ 0.86
LRRC28-210ENST00000558879 CDK8P49336 464 aa20.44■□□□□ 0.86
LRRC28-210ENST00000558879 GIMAP6Q6P9H5 292 aa20.44■□□□□ 0.86
LRRC28-210ENST00000558879 AMOTL1Q8IY63 956 aa20.44■□□□□ 0.86
LRRC28-210ENST00000558879 NKX2-3Q8TAU0 364 aa20.44■□□□□ 0.86
LRRC28-210ENST00000558879 DDRGK1Q96HY6 314 aa20.44■□□□□ 0.86
LRRC28-210ENST00000558879 CCDC17Q96LX7 622 aa20.44■□□□□ 0.86
LRRC28-210ENST00000558879 UNC93B1Q9H1C4 597 aa20.44■□□□□ 0.86
LRRC28-210ENST00000558879 GPAA1O43292 621 aa20.43■□□□□ 0.86
LRRC28-210ENST00000558879 MX1P20591 662 aa20.43■□□□□ 0.86
LRRC28-210ENST00000558879 Q3C1V9 767 aa20.43■□□□□ 0.86
LRRC28-210ENST00000558879 SBK1Q52WX2 424 aa20.43■□□□□ 0.86
LRRC28-210ENST00000558879 CLEC10AQ8IUN9 316 aa20.43■□□□□ 0.86
LRRC28-210ENST00000558879 SOCS4Q8WXH5 440 aa20.43■□□□□ 0.86
LRRC28-210ENST00000558879 RNF208Q9H0X6 261 aa20.43■□□□□ 0.86
LRRC28-210ENST00000558879 PORCNQ9H237 461 aa20.43■□□□□ 0.86
LRRC28-210ENST00000558879 RPAP3Q9H6T3 665 aaPredicted RBP20.43■□□□□ 0.86
LRRC28-210ENST00000558879 EPB41L4AQ9HCS5 686 aaPredicted RBP20.43■□□□□ 0.86
LRRC28-210ENST00000558879 PAK6Q9NQU5 681 aaPredicted RBP20.43■□□□□ 0.86
LRRC28-210ENST00000558879 BIN2Q9UBW5 565 aaPredicted RBP20.43■□□□□ 0.86
LRRC28-210ENST00000558879 RABGAP1Q9Y3P9 1069 aa20.43■□□□□ 0.86
LRRC28-210ENST00000558879 LAMA4Q16363 1823 aa20.43■□□□□ 0.86
LRRC28-210ENST00000558879 SPDYE16A6NNV3 312 aaPredicted RBP20.42■□□□□ 0.86
LRRC28-210ENST00000558879 M0R2C6 588 aa20.42■□□□□ 0.86
LRRC28-210ENST00000558879 MAPK4P31152 587 aa20.42■□□□□ 0.86
LRRC28-210ENST00000558879 ICA1Q05084 483 aa20.42■□□□□ 0.86
LRRC28-210ENST00000558879 AAMPQ13685 434 aa20.42■□□□□ 0.86
LRRC28-210ENST00000558879 UBE2Q1Q7Z7E8 422 aa20.42■□□□□ 0.86
LRRC28-210ENST00000558879 SIAH1Q8IUQ4 282 aa20.42■□□□□ 0.86
LRRC28-210ENST00000558879 GCC1Q96CN9 775 aa20.42■□□□□ 0.86
LRRC28-210ENST00000558879 PAGR1Q9BTK6 254 aa20.42■□□□□ 0.86
LRRC28-210ENST00000558879 HMGCRP04035 888 aa20.41■□□□□ 0.86
LRRC28-210ENST00000558879 KIAA1755Q5JYT7 1200 aa20.41■□□□□ 0.86
LRRC28-210ENST00000558879 U2AF1L4Q8WU68 220 aaKnown RBP20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms