RNA–Protein interactions for RNA: ENST00000558450.5

CPNE6-206, Transcript of copine 6, humanhuman

TSL 4

Gene CPNE6, Length 591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-206ENST00000558450 FOSL2P15408 326 aa17.06■□□□□ 0.32
CPNE6-206ENST00000558450 PTPREP23469 700 aa17.06■□□□□ 0.32
CPNE6-206ENST00000558450 SMAD3P84022 425 aaKnown RBP17.06■□□□□ 0.32
CPNE6-206ENST00000558450 USP17L24Q0WX57 530 aa17.06■□□□□ 0.32
CPNE6-206ENST00000558450 SHHQ15465 462 aa17.06■□□□□ 0.32
CPNE6-206ENST00000558450 SHROOM1Q2M3G4 852 aaPredicted RBP17.06■□□□□ 0.32
CPNE6-206ENST00000558450 ARRDC4Q8NCT1 418 aa17.06■□□□□ 0.32
CPNE6-206ENST00000558450 TGFBRAP1Q8WUH2 860 aa17.06■□□□□ 0.32
CPNE6-206ENST00000558450 MYLIPQ8WY64 445 aa17.06■□□□□ 0.32
CPNE6-206ENST00000558450 PRDM5Q9NQX1 630 aaPredicted RBP17.06■□□□□ 0.32
CPNE6-206ENST00000558450 NDUFB9Q9Y6M9 179 aa17.06■□□□□ 0.32
CPNE6-206ENST00000558450 KBTBD13C9JR72 458 aa17.05■□□□□ 0.32
CPNE6-206ENST00000558450 CNMDO75829 334 aa17.05■□□□□ 0.32
CPNE6-206ENST00000558450 MCAMP43121 646 aa17.05■□□□□ 0.32
CPNE6-206ENST00000558450 GRB14Q14449 540 aa17.05■□□□□ 0.32
CPNE6-206ENST00000558450 C9orf50Q5SZB4 431 aa17.05■□□□□ 0.32
CPNE6-206ENST00000558450 POTEEQ6S8J3 1075 aa17.05■□□□□ 0.32
CPNE6-206ENST00000558450 C12orf42Q96LP6 360 aa17.05■□□□□ 0.32
CPNE6-206ENST00000558450 MEIS3Q99687 375 aa17.05■□□□□ 0.32
CPNE6-206ENST00000558450 API5Q9BZZ5 524 aaKnown RBP17.05■□□□□ 0.32
CPNE6-206ENST00000558450 PALD1Q9ULE6 856 aa17.05■□□□□ 0.32
CPNE6-206ENST00000558450 FOCADQ5VW36 1801 aa17.05■□□□□ 0.32
CPNE6-206ENST00000558450 RLFQ13129 1914 aa17.04■□□□□ 0.32
CPNE6-206ENST00000558450 CDK5RAP2Q96SN8 1893 aa17.04■□□□□ 0.32
CPNE6-206ENST00000558450 CYP2C19P33261 490 aa17.04■□□□□ 0.32
CPNE6-206ENST00000558450 USP14P54578 494 aa17.04■□□□□ 0.32
CPNE6-206ENST00000558450 PPP4CP60510 307 aa17.04■□□□□ 0.32
CPNE6-206ENST00000558450 GH2P01242 217 aa17.03■□□□□ 0.32
CPNE6-206ENST00000558450 CYBAP13498 195 aa17.03■□□□□ 0.32
CPNE6-206ENST00000558450 MTX1Q13505 466 aa17.03■□□□□ 0.32
CPNE6-206ENST00000558450 ZYXQ15942 572 aaKnown RBP17.03■□□□□ 0.32
CPNE6-206ENST00000558450 GJC2Q5T442 439 aaPredicted RBP17.03■□□□□ 0.32
CPNE6-206ENST00000558450 BADQ92934 168 aa17.03■□□□□ 0.32
CPNE6-206ENST00000558450 TTYH1Q9H313 450 aaPredicted RBP17.03■□□□□ 0.32
CPNE6-206ENST00000558450 NCOR1O75376 2440 aa17.03■□□□□ 0.32
CPNE6-206ENST00000558450 TMEM265A0A087WTH1 108 aa17.02■□□□□ 0.32
CPNE6-206ENST00000558450 GNAI3P08754 354 aa17.02■□□□□ 0.32
CPNE6-206ENST00000558450 LBX2Q6XYB7 198 aa17.02■□□□□ 0.32
CPNE6-206ENST00000558450 SLC39A5Q6ZMH5 540 aa17.02■□□□□ 0.32
CPNE6-206ENST00000558450 CATSPERGQ6ZRH7 1159 aa17.02■□□□□ 0.32
CPNE6-206ENST00000558450 NPLOC4Q8TAT6 608 aa17.02■□□□□ 0.32
CPNE6-206ENST00000558450 SAP30BPQ9UHR5 308 aaKnown RBP17.02■□□□□ 0.32
CPNE6-206ENST00000558450 NOB1Q9ULX3 412 aaKnown RBP17.02■□□□□ 0.32
CPNE6-206ENST00000558450 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.02■□□□□ 0.32
CPNE6-206ENST00000558450 VCAM1P19320 739 aa17.01■□□□□ 0.31
CPNE6-206ENST00000558450 SNX17Q15036 470 aa17.01■□□□□ 0.31
CPNE6-206ENST00000558450 TRIM60Q495X7 471 aa17.01■□□□□ 0.31
CPNE6-206ENST00000558450 DPP9Q86TI2 863 aa17.01■□□□□ 0.31
CPNE6-206ENST00000558450 TRPV1Q8NER1 839 aa17.01■□□□□ 0.31
CPNE6-206ENST00000558450 PDLIM7Q9NR12 457 aa17.01■□□□□ 0.31
CPNE6-206ENST00000558450 BDP1A6H8Y1 2624 aa17■□□□□ 0.31
CPNE6-206ENST00000558450 IGSF3O75054 1194 aa17■□□□□ 0.31
CPNE6-206ENST00000558450 MYCNP04198 464 aaPredicted RBP17■□□□□ 0.31
CPNE6-206ENST00000558450 TTC39AQ5SRH9 613 aa17■□□□□ 0.31
CPNE6-206ENST00000558450 OLFML2BQ68BL8 750 aa17■□□□□ 0.31
CPNE6-206ENST00000558450 ADGRA1Q86SQ6 560 aa17■□□□□ 0.31
CPNE6-206ENST00000558450 CDCA7LQ96GN5 454 aa17■□□□□ 0.31
CPNE6-206ENST00000558450 KIAA1683Q9H0B3 1180 aa17■□□□□ 0.31
CPNE6-206ENST00000558450 SNRKQ9NRH2 765 aa17■□□□□ 0.31
CPNE6-206ENST00000558450 BTBD7Q9P203 1132 aa17■□□□□ 0.31
CPNE6-206ENST00000558450 ZNF236Q9UL36 1845 aa17■□□□□ 0.31
CPNE6-206ENST00000558450 SPDYE16A6NNV3 312 aaPredicted RBP16.99■□□□□ 0.31
CPNE6-206ENST00000558450 SEPT4O43236 478 aa16.99■□□□□ 0.31
CPNE6-206ENST00000558450 G3BP1Q13283 466 aaKnown RBP eCLIP16.99■□□□□ 0.31
CPNE6-206ENST00000558450 RAB3GAP1Q15042 981 aa16.99■□□□□ 0.31
CPNE6-206ENST00000558450 TJAP1Q5JTD0 557 aa16.99■□□□□ 0.31
CPNE6-206ENST00000558450 RNPC3Q96LT9 517 aaKnown RBP16.99■□□□□ 0.31
CPNE6-206ENST00000558450 MYH1P12882 1939 aa16.98■□□□□ 0.31
CPNE6-206ENST00000558450 CCER2I3L3R5 266 aa16.98■□□□□ 0.31
CPNE6-206ENST00000558450 STRNO43815 780 aa16.98■□□□□ 0.31
CPNE6-206ENST00000558450 IGHA2P01877 340 aa16.98■□□□□ 0.31
CPNE6-206ENST00000558450 ADORA2AP29274 412 aa16.98■□□□□ 0.31
CPNE6-206ENST00000558450 CCDC158Q5M9N0 1113 aa16.98■□□□□ 0.31
CPNE6-206ENST00000558450 C1orf53Q5VUE5 145 aa16.98■□□□□ 0.31
CPNE6-206ENST00000558450 ANO1Q5XXA6 986 aa16.98■□□□□ 0.31
CPNE6-206ENST00000558450 TATDN1Q6P1N9 297 aa16.98■□□□□ 0.31
CPNE6-206ENST00000558450 RPAP3Q9H6T3 665 aaPredicted RBP16.98■□□□□ 0.31
CPNE6-206ENST00000558450 SLC5A4Q9NY91 659 aa16.98■□□□□ 0.31
CPNE6-206ENST00000558450 SERPINB13Q9UIV8 391 aa16.98■□□□□ 0.31
CPNE6-206ENST00000558450 TRIM43BA6NCK2 446 aa16.97■□□□□ 0.31
CPNE6-206ENST00000558450 ADCYAP1R1P41586 468 aa16.97■□□□□ 0.31
CPNE6-206ENST00000558450 ABCB5Q2M3G0 1257 aa16.97■□□□□ 0.31
CPNE6-206ENST00000558450 CERKLQ49MI3 558 aaPredicted RBP16.97■□□□□ 0.31
CPNE6-206ENST00000558450 SH3RF1Q7Z6J0 888 aa16.97■□□□□ 0.31
CPNE6-206ENST00000558450 CERS3Q8IU89 383 aa16.97■□□□□ 0.31
CPNE6-206ENST00000558450 TRIM43Q96BQ3 446 aaPredicted RBP16.97■□□□□ 0.31
CPNE6-206ENST00000558450 EHD4Q9H223 541 aa16.97■□□□□ 0.31
CPNE6-206ENST00000558450 CABP5Q9NP86 173 aa16.97■□□□□ 0.31
CPNE6-206ENST00000558450 TACC3Q9Y6A5 838 aa16.97■□□□□ 0.31
CPNE6-206ENST00000558450 TNFRSF10AO00220 468 aa16.96■□□□□ 0.31
CPNE6-206ENST00000558450 CYP2E1P05181 493 aaPredicted RBP16.96■□□□□ 0.31
CPNE6-206ENST00000558450 COL9A1P20849 921 aa16.96■□□□□ 0.31
CPNE6-206ENST00000558450 USP5P45974 858 aa16.96■□□□□ 0.31
CPNE6-206ENST00000558450 TLE2Q04725 743 aa16.96■□□□□ 0.31
CPNE6-206ENST00000558450 LRRC41Q15345 812 aa16.96■□□□□ 0.31
CPNE6-206ENST00000558450 ACER1Q8TDN7 264 aa16.96■□□□□ 0.31
CPNE6-206ENST00000558450 FERMT2Q96AC1 680 aa16.96■□□□□ 0.31
CPNE6-206ENST00000558450 MOV10L1Q9BXT6 1211 aaKnown RBP16.96■□□□□ 0.31
CPNE6-206ENST00000558450 CLTBP09497 229 aa16.95■□□□□ 0.3
CPNE6-206ENST00000558450 CYP7A1P22680 504 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms