RNA–Protein interactions for RNA: ENST00000558335.5

GABPB1-207, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 406 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-207ENST00000558335 MIPOL1Q8TD10 442 aa6.22□□□□□ -1.41
GABPB1-207ENST00000558335 TCEANC2Q96MN5 208 aa6.22□□□□□ -1.41
GABPB1-207ENST00000558335 CDC5LQ99459 802 aaKnown RBP6.22□□□□□ -1.41
GABPB1-207ENST00000558335 MMTAG2Q9BU76 263 aaKnown RBP6.22□□□□□ -1.41
GABPB1-207ENST00000558335 NAPBQ9H115 298 aa6.22□□□□□ -1.41
GABPB1-207ENST00000558335 PRDM11Q9NQV5 511 aa6.22□□□□□ -1.41
GABPB1-207ENST00000558335 CREBZFQ9NS37 354 aa6.22□□□□□ -1.41
GABPB1-207ENST00000558335 HOMER3Q9NSC5 361 aa6.22□□□□□ -1.41
GABPB1-207ENST00000558335 RMND1Q9NWS8 449 aa6.22□□□□□ -1.41
GABPB1-207ENST00000558335 IFNKQ9P0W0 207 aa6.22□□□□□ -1.41
GABPB1-207ENST00000558335 MYO1AQ9UBC5 1043 aa6.22□□□□□ -1.41
GABPB1-207ENST00000558335 SUN2Q9UH99 717 aa6.22□□□□□ -1.41
GABPB1-207ENST00000558335 KCNH3Q9ULD8 1083 aa6.22□□□□□ -1.41
GABPB1-207ENST00000558335 HPSEQ9Y251 543 aa6.22□□□□□ -1.41
GABPB1-207ENST00000558335 DOCK2Q92608 1830 aa6.22□□□□□ -1.41
GABPB1-207ENST00000558335 PNPLA7Q6ZV29 1317 aa6.22□□□□□ -1.41
GABPB1-207ENST00000558335 A0A1B0GVL5 298 aa6.21□□□□□ -1.42
GABPB1-207ENST00000558335 GOLGA8AA7E2F4 631 aa6.21□□□□□ -1.42
GABPB1-207ENST00000558335 M0R2C6 588 aa6.21□□□□□ -1.42
GABPB1-207ENST00000558335 SH2B2O14492 632 aaPredicted RBP6.21□□□□□ -1.42
GABPB1-207ENST00000558335 RAD21O60216 631 aa6.21□□□□□ -1.42
GABPB1-207ENST00000558335 ERLIN1O75477 346 aa6.21□□□□□ -1.42
GABPB1-207ENST00000558335 PDE8BO95263 885 aa6.21□□□□□ -1.42
GABPB1-207ENST00000558335 MYL1P05976 194 aa6.21□□□□□ -1.42
GABPB1-207ENST00000558335 VDRP11473 427 aa6.21□□□□□ -1.42
GABPB1-207ENST00000558335 TXLNAP40222 546 aa6.21□□□□□ -1.42
GABPB1-207ENST00000558335 TRAPPC10P48553 1259 aa6.21□□□□□ -1.42
GABPB1-207ENST00000558335 EVA1CP58658 441 aa6.21□□□□□ -1.42
GABPB1-207ENST00000558335 NEDD9Q14511 834 aa6.21□□□□□ -1.42
GABPB1-207ENST00000558335 TMEM67Q5HYA8 995 aa6.21□□□□□ -1.42
GABPB1-207ENST00000558335 SLC9C2Q5TAH2 1124 aa6.21□□□□□ -1.42
GABPB1-207ENST00000558335 NT5DC1Q5TFE4 455 aa6.21□□□□□ -1.42
GABPB1-207ENST00000558335 SPECC1LQ69YQ0 1117 aa6.21□□□□□ -1.42
GABPB1-207ENST00000558335 APOA5Q6Q788 366 aa6.21□□□□□ -1.42
GABPB1-207ENST00000558335 KRBA2Q6ZNG9 492 aa6.21□□□□□ -1.42
GABPB1-207ENST00000558335 PPFIBP1Q86W92 1011 aa6.21□□□□□ -1.42
GABPB1-207ENST00000558335 VPS37DQ86XT2 251 aa6.21□□□□□ -1.42
GABPB1-207ENST00000558335 CCDC125Q86Z20 511 aa6.21□□□□□ -1.42
GABPB1-207ENST00000558335 CNGA4Q8IV77 575 aa6.21□□□□□ -1.42
GABPB1-207ENST00000558335 NOSTRINQ8IVI9 506 aa6.21□□□□□ -1.42
GABPB1-207ENST00000558335 VSTM4Q8IW00 320 aa6.21□□□□□ -1.42
GABPB1-207ENST00000558335 CACTIN-AS1Q8N1I8 211 aa6.21□□□□□ -1.42
GABPB1-207ENST00000558335 GPR161Q8N6U8 529 aaKnown RBP6.21□□□□□ -1.42
GABPB1-207ENST00000558335 CEP112Q8N8E3 955 aa6.21□□□□□ -1.42
GABPB1-207ENST00000558335 DRAXINQ8NBI3 349 aaPredicted RBP6.21□□□□□ -1.42
GABPB1-207ENST00000558335 CCDC26Q8TAB7 109 aa6.21□□□□□ -1.42
GABPB1-207ENST00000558335 DDX54Q8TDD1 881 aaKnown RBP6.21□□□□□ -1.42
GABPB1-207ENST00000558335 OSBP2Q969R2 916 aa6.21□□□□□ -1.42
GABPB1-207ENST00000558335 CCDC47Q96A33 483 aaKnown RBP6.21□□□□□ -1.42
GABPB1-207ENST00000558335 EXOC4Q96A65 974 aa6.21□□□□□ -1.42
GABPB1-207ENST00000558335 ZBTB9Q96C00 473 aa6.21□□□□□ -1.42
GABPB1-207ENST00000558335 MIEF2Q96C03 454 aa6.21□□□□□ -1.42
GABPB1-207ENST00000558335 PPP1R13BQ96KQ4 1090 aa6.21□□□□□ -1.42
GABPB1-207ENST00000558335 PANX2Q96RD6 677 aa6.21□□□□□ -1.42
GABPB1-207ENST00000558335 SEC62Q99442 399 aaKnown RBP6.21□□□□□ -1.42
GABPB1-207ENST00000558335 POLR3CQ9BUI4 534 aaPredicted RBP6.21□□□□□ -1.42
GABPB1-207ENST00000558335 RNF26Q9BY78 433 aaPredicted RBP6.21□□□□□ -1.42
GABPB1-207ENST00000558335 XPO4Q9C0E2 1151 aaKnown RBP6.21□□□□□ -1.42
GABPB1-207ENST00000558335 GOLPH3LQ9H4A5 285 aa6.21□□□□□ -1.42
GABPB1-207ENST00000558335 RRP15Q9Y3B9 282 aaKnown RBP6.21□□□□□ -1.42
GABPB1-207ENST00000558335 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.21□□□□□ -1.42
GABPB1-207ENST00000558335 COL5A2P05997 1499 aaPredicted RBP6.21□□□□□ -1.42
GABPB1-207ENST00000558335 NWD2Q9ULI1 1742 aa6.2□□□□□ -1.42
GABPB1-207ENST00000558335 A0A087WUV0 522 aaPredicted RBP6.2□□□□□ -1.42
GABPB1-207ENST00000558335 A0A1B0GUA9 196 aa6.2□□□□□ -1.42
GABPB1-207ENST00000558335 NBPF26B4DH59 902 aa6.2□□□□□ -1.42
GABPB1-207ENST00000558335 IFIT3O14879 490 aaKnown RBP6.2□□□□□ -1.42
GABPB1-207ENST00000558335 KIF5CO60282 957 aa6.2□□□□□ -1.42
GABPB1-207ENST00000558335 CCDC175P0C221 793 aa6.2□□□□□ -1.42
GABPB1-207ENST00000558335 FDPSP14324 419 aaKnown RBP6.2□□□□□ -1.42
GABPB1-207ENST00000558335 IL6STP40189 918 aaPredicted RBP6.2□□□□□ -1.42
GABPB1-207ENST00000558335 NAP1L1P55209 391 aaKnown RBP6.2□□□□□ -1.42
GABPB1-207ENST00000558335 CTSWP56202 376 aa6.2□□□□□ -1.42
GABPB1-207ENST00000558335 SFSWAPQ12872 951 aaKnown RBP6.2□□□□□ -1.42
GABPB1-207ENST00000558335 LRMPQ12912 555 aa6.2□□□□□ -1.42
GABPB1-207ENST00000558335 RASA3Q14644 834 aa6.2□□□□□ -1.42
GABPB1-207ENST00000558335 WTAPQ15007 396 aa6.2□□□□□ -1.42
GABPB1-207ENST00000558335 RTN1Q16799 776 aa6.2□□□□□ -1.42
GABPB1-207ENST00000558335 SLC5A9Q2M3M2 681 aa6.2□□□□□ -1.42
GABPB1-207ENST00000558335 TSR1Q2NL82 804 aaKnown RBP6.2□□□□□ -1.42
GABPB1-207ENST00000558335 CCDC144BQ3MJ40 725 aa6.2□□□□□ -1.42
GABPB1-207ENST00000558335 DNAJC21Q5F1R6 531 aaKnown RBP6.2□□□□□ -1.42
GABPB1-207ENST00000558335 AKNAD1Q5T1N1 836 aa6.2□□□□□ -1.42
GABPB1-207ENST00000558335 NBPF14Q5TI25 921 aa6.2□□□□□ -1.42
GABPB1-207ENST00000558335 KRT40Q6A162 431 aa6.2□□□□□ -1.42
GABPB1-207ENST00000558335 SYT10Q6XYQ8 523 aa6.2□□□□□ -1.42
GABPB1-207ENST00000558335 IQCA1Q86XH1 822 aa6.2□□□□□ -1.42
GABPB1-207ENST00000558335 CCDC144CPQ8IYA2 1237 aa6.2□□□□□ -1.42
GABPB1-207ENST00000558335 KCTD17Q8N5Z5 321 aa6.2□□□□□ -1.42
GABPB1-207ENST00000558335 SAMD3Q8N6K7 520 aa6.2□□□□□ -1.42
GABPB1-207ENST00000558335 EHBP1Q8NDI1 1231 aa6.2□□□□□ -1.42
GABPB1-207ENST00000558335 ESR2Q92731 530 aa6.2□□□□□ -1.42
GABPB1-207ENST00000558335 EDC3Q96F86 508 aaKnown RBP6.2□□□□□ -1.42
GABPB1-207ENST00000558335 GSDMAQ96QA5 445 aa6.2□□□□□ -1.42
GABPB1-207ENST00000558335 LZTS2Q9BRK4 669 aa6.2□□□□□ -1.42
GABPB1-207ENST00000558335 UBAC1Q9BSL1 405 aa6.2□□□□□ -1.42
GABPB1-207ENST00000558335 CRACR2AQ9BSW2 395 aa6.2□□□□□ -1.42
GABPB1-207ENST00000558335 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.2□□□□□ -1.42
GABPB1-207ENST00000558335 LRRC2Q9BYS8 371 aa6.2□□□□□ -1.42
GABPB1-207ENST00000558335 TRIM6Q9C030 488 aaPredicted RBP6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms