RNA–Protein interactions for RNA: ENST00000558324.1

HERC1-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 828 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-202ENST00000558324 USP17L21D6R901 530 aa14.34□□□□□ -0.11
HERC1-202ENST00000558324 INHAP05111 366 aa14.34□□□□□ -0.11
HERC1-202ENST00000558324 VCAM1P19320 739 aa14.34□□□□□ -0.11
HERC1-202ENST00000558324 USP14P54578 494 aa14.34□□□□□ -0.11
HERC1-202ENST00000558324 CLEC10AQ8IUN9 316 aa14.34□□□□□ -0.11
HERC1-202ENST00000558324 KBTBD3Q8NAB2 608 aa14.34□□□□□ -0.11
HERC1-202ENST00000558324 GPRC5AQ8NFJ5 357 aa14.34□□□□□ -0.11
HERC1-202ENST00000558324 C12orf42Q96LP6 360 aa14.34□□□□□ -0.11
HERC1-202ENST00000558324 KIAA1683Q9H0B3 1180 aa14.34□□□□□ -0.11
HERC1-202ENST00000558324 UNC93B1Q9H1C4 597 aa14.34□□□□□ -0.11
HERC1-202ENST00000558324 MORF4L1Q9UBU8 362 aa14.34□□□□□ -0.11
HERC1-202ENST00000558324 SWAP70Q9UH65 585 aa14.34□□□□□ -0.11
HERC1-202ENST00000558324 MYH7P12883 1935 aa14.34□□□□□ -0.11
HERC1-202ENST00000558324 USP17L15C9J2P7 530 aa14.33□□□□□ -0.12
HERC1-202ENST00000558324 USP17L13C9JLJ4 530 aa14.33□□□□□ -0.12
HERC1-202ENST00000558324 USP17L11C9JVI0 530 aa14.33□□□□□ -0.12
HERC1-202ENST00000558324 USP17L18D6R9N7 530 aa14.33□□□□□ -0.12
HERC1-202ENST00000558324 USP17L22D6RA61 530 aa14.33□□□□□ -0.12
HERC1-202ENST00000558324 USP17L17D6RBQ6 530 aa14.33□□□□□ -0.12
HERC1-202ENST00000558324 USP17L19D6RCP7 530 aa14.33□□□□□ -0.12
HERC1-202ENST00000558324 USP17L20D6RJB6 530 aa14.33□□□□□ -0.12
HERC1-202ENST00000558324 AKR1B1P15121 316 aa14.33□□□□□ -0.12
HERC1-202ENST00000558324 USP17L24Q0WX57 530 aa14.33□□□□□ -0.12
HERC1-202ENST00000558324 IRF5Q13568 498 aa14.33□□□□□ -0.12
HERC1-202ENST00000558324 C12orf60Q5U649 245 aa14.33□□□□□ -0.12
HERC1-202ENST00000558324 CCAR1Q8IX12 1150 aaKnown RBP14.33□□□□□ -0.12
HERC1-202ENST00000558324 STK11IPQ8N1F8 1099 aa14.33□□□□□ -0.12
HERC1-202ENST00000558324 SHISA4Q96DD7 197 aa14.33□□□□□ -0.12
HERC1-202ENST00000558324 RBPJLQ9UBG7 517 aa14.33□□□□□ -0.12
HERC1-202ENST00000558324 A0A1W2PRG0 241 aa14.32□□□□□ -0.12
HERC1-202ENST00000558324 RNF113AO15541 343 aaKnown RBP14.32□□□□□ -0.12
HERC1-202ENST00000558324 ERVK-9P63128 1117 aa14.32□□□□□ -0.12
HERC1-202ENST00000558324 ERVK-24P63145 666 aa14.32□□□□□ -0.12
HERC1-202ENST00000558324 TMEM179Q6ZVK1 233 aa14.32□□□□□ -0.12
HERC1-202ENST00000558324 PXYLP1Q8TE99 480 aa14.32□□□□□ -0.12
HERC1-202ENST00000558324 APPBP2Q92624 585 aa14.32□□□□□ -0.12
HERC1-202ENST00000558324 OSBP2Q969R2 916 aa14.32□□□□□ -0.12
HERC1-202ENST00000558324 STRBPQ96SI9 672 aaKnown RBP14.32□□□□□ -0.12
HERC1-202ENST00000558324 PORCNQ9H237 461 aa14.32□□□□□ -0.12
HERC1-202ENST00000558324 RPAP3Q9H6T3 665 aaPredicted RBP14.32□□□□□ -0.12
HERC1-202ENST00000558324 CWC22Q9HCG8 908 aaKnown RBP14.32□□□□□ -0.12
HERC1-202ENST00000558324 ZBTB47Q9UFB7 747 aaPredicted RBP14.32□□□□□ -0.12
HERC1-202ENST00000558324 BAZ2AQ9UIF9 1905 aaKnown RBP14.32□□□□□ -0.12
HERC1-202ENST00000558324 TTC41PQ6P2S7 1318 aa14.32□□□□□ -0.12
HERC1-202ENST00000558324 M0R2C6 588 aa14.31□□□□□ -0.12
HERC1-202ENST00000558324 ERC2O15083 957 aa14.31□□□□□ -0.12
HERC1-202ENST00000558324 GJB1P08034 283 aa14.31□□□□□ -0.12
HERC1-202ENST00000558324 MX1P20591 662 aa14.31□□□□□ -0.12
HERC1-202ENST00000558324 CYP2B6P20813 491 aa14.31□□□□□ -0.12
HERC1-202ENST00000558324 CDK8P49336 464 aa14.31□□□□□ -0.12
HERC1-202ENST00000558324 ICA1Q05084 483 aa14.31□□□□□ -0.12
HERC1-202ENST00000558324 Q3C1V9 767 aa14.31□□□□□ -0.12
HERC1-202ENST00000558324 CTR9Q6PD62 1173 aa14.31□□□□□ -0.12
HERC1-202ENST00000558324 POTEEQ6S8J3 1075 aa14.31□□□□□ -0.12
HERC1-202ENST00000558324 CATSPERGQ6ZRH7 1159 aa14.31□□□□□ -0.12
HERC1-202ENST00000558324 PI4K2BQ8TCG2 481 aa14.31□□□□□ -0.12
HERC1-202ENST00000558324 GTF3C2Q8WUA4 911 aaPredicted RBP14.31□□□□□ -0.12
HERC1-202ENST00000558324 FSD1Q9BTV5 496 aa14.31□□□□□ -0.12
HERC1-202ENST00000558324 TANGO6Q9C0B7 1094 aa14.31□□□□□ -0.12
HERC1-202ENST00000558324 ARPP21Q9UBL0 812 aaPredicted RBP14.31□□□□□ -0.12
HERC1-202ENST00000558324 GJD2Q9UKL4 321 aa14.31□□□□□ -0.12
HERC1-202ENST00000558324 KIAA0100Q14667 2235 aaKnown RBP14.31□□□□□ -0.12
HERC1-202ENST00000558324 MKI67P46013 3256 aaKnown RBP14.31□□□□□ -0.12
HERC1-202ENST00000558324 GPAA1O43292 621 aa14.3□□□□□ -0.12
HERC1-202ENST00000558324 GLRX3O76003 335 aaKnown RBP14.3□□□□□ -0.12
HERC1-202ENST00000558324 ZFYP08048 801 aaPredicted RBP14.3□□□□□ -0.12
HERC1-202ENST00000558324 GJA8P48165 433 aa14.3□□□□□ -0.12
HERC1-202ENST00000558324 ATP2B2Q01814 1243 aa14.3□□□□□ -0.12
HERC1-202ENST00000558324 ANKRD45Q5TZF3 282 aa14.3□□□□□ -0.12
HERC1-202ENST00000558324 WDR78Q5VTH9 848 aa14.3□□□□□ -0.12
HERC1-202ENST00000558324 C16orf86Q6ZW13 317 aa14.3□□□□□ -0.12
HERC1-202ENST00000558324 SPICE1Q8N0Z3 855 aa14.3□□□□□ -0.12
HERC1-202ENST00000558324 NKX2-3Q8TAU0 364 aa14.3□□□□□ -0.12
HERC1-202ENST00000558324 U2AF1L4Q8WU68 220 aaKnown RBP14.3□□□□□ -0.12
HERC1-202ENST00000558324 DEFB118Q96PH6 123 aa14.3□□□□□ -0.12
HERC1-202ENST00000558324 ARHGEF10LQ9HCE6 1279 aa14.3□□□□□ -0.12
HERC1-202ENST00000558324 PDE4DIPQ5VU43 2346 aa14.29□□□□□ -0.12
HERC1-202ENST00000558324 GSG1L2A8MUP6 293 aa14.29□□□□□ -0.12
HERC1-202ENST00000558324 MINDY4BA8MYZ0 360 aa14.29□□□□□ -0.12
HERC1-202ENST00000558324 CNMDO75829 334 aa14.29□□□□□ -0.12
HERC1-202ENST00000558324 HMGCRP04035 888 aa14.29□□□□□ -0.12
HERC1-202ENST00000558324 APPP05067 770 aa14.29□□□□□ -0.12
HERC1-202ENST00000558324 MAPK4P31152 587 aa14.29□□□□□ -0.12
HERC1-202ENST00000558324 TDO2P48775 406 aa14.29□□□□□ -0.12
HERC1-202ENST00000558324 TRIM32Q13049 653 aa14.29□□□□□ -0.12
HERC1-202ENST00000558324 KIAA1755Q5JYT7 1200 aa14.29□□□□□ -0.12
HERC1-202ENST00000558324 SAMD1Q6SPF0 538 aaPredicted RBP14.29□□□□□ -0.12
HERC1-202ENST00000558324 SOCS4Q8WXH5 440 aa14.29□□□□□ -0.12
HERC1-202ENST00000558324 SEC62Q99442 399 aaKnown RBP14.29□□□□□ -0.12
HERC1-202ENST00000558324 NUDT12Q9BQG2 462 aa14.29□□□□□ -0.12
HERC1-202ENST00000558324 EPB41L4AQ9HCS5 686 aaPredicted RBP14.29□□□□□ -0.12
HERC1-202ENST00000558324 MYH8P13535 1937 aa14.29□□□□□ -0.12
HERC1-202ENST00000558324 SPDYE16A6NNV3 312 aaPredicted RBP14.28□□□□□ -0.12
HERC1-202ENST00000558324 LRRFIP1Q32MZ4 808 aaKnown RBP14.28□□□□□ -0.12
HERC1-202ENST00000558324 GPR142Q7Z601 462 aa14.28□□□□□ -0.12
HERC1-202ENST00000558324 TRIB2Q92519 343 aa14.28□□□□□ -0.12
HERC1-202ENST00000558324 CCDC17Q96LX7 622 aa14.28□□□□□ -0.12
HERC1-202ENST00000558324 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.28□□□□□ -0.12
HERC1-202ENST00000558324 BTBD7Q9P203 1132 aa14.28□□□□□ -0.12
HERC1-202ENST00000558324 RABGAP1Q9Y3P9 1069 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms