RNA–Protein interactions for RNA: ENST00000558282.5

CSPG4P12-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

BASIC

Gene CSPG4P12, Length 4,853 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-201ENST00000558282 DRP2Q13474 957 aa12.99□□□□□ -0.33
CSPG4P12-201ENST00000558282 LONRF3Q496Y0 759 aa12.99□□□□□ -0.33
CSPG4P12-201ENST00000558282 CCDC93Q567U6 631 aa12.99□□□□□ -0.33
CSPG4P12-201ENST00000558282 FAM173BQ6P4H8 233 aa12.99□□□□□ -0.33
CSPG4P12-201ENST00000558282 ZSCAN29Q8IWY8 852 aaPredicted RBP12.99□□□□□ -0.33
CSPG4P12-201ENST00000558282 ZKSCAN3Q9BRR0 538 aa12.99□□□□□ -0.33
CSPG4P12-201ENST00000558282 EIF2AK4Q9P2K8 1649 aaKnown RBP12.99□□□□□ -0.33
CSPG4P12-201ENST00000558282 RASSF10A6NK89 507 aa12.99□□□□□ -0.33
CSPG4P12-201ENST00000558282 KRIT1O00522 736 aa12.99□□□□□ -0.33
CSPG4P12-201ENST00000558282 SLC27A2O14975 620 aa12.99□□□□□ -0.33
CSPG4P12-201ENST00000558282 NR1D1P20393 614 aa12.99□□□□□ -0.33
CSPG4P12-201ENST00000558282 ARL1P40616 181 aaPredicted RBP12.99□□□□□ -0.33
CSPG4P12-201ENST00000558282 KCTD16Q68DU8 428 aa12.99□□□□□ -0.33
CSPG4P12-201ENST00000558282 EMBQ6PCB8 327 aa12.99□□□□□ -0.33
CSPG4P12-201ENST00000558282 BBOF1Q8ND07 529 aa12.99□□□□□ -0.33
CSPG4P12-201ENST00000558282 GRK7Q8WTQ7 553 aa12.99□□□□□ -0.33
CSPG4P12-201ENST00000558282 EPN1Q9Y6I3 576 aaPredicted RBP12.99□□□□□ -0.33
CSPG4P12-201ENST00000558282 ARHGEF12Q9NZN5 1544 aa12.99□□□□□ -0.33
CSPG4P12-201ENST00000558282 VAMP4O75379 141 aa12.99□□□□□ -0.33
CSPG4P12-201ENST00000558282 ATP5HO75947 161 aa12.99□□□□□ -0.33
CSPG4P12-201ENST00000558282 GNA11P29992 359 aa12.99□□□□□ -0.33
CSPG4P12-201ENST00000558282 PHBP35232 272 aa12.99□□□□□ -0.33
CSPG4P12-201ENST00000558282 DNM2P50570 870 aa12.99□□□□□ -0.33
CSPG4P12-201ENST00000558282 TEX11Q8IYF3 940 aa12.99□□□□□ -0.33
CSPG4P12-201ENST00000558282 USP6NLQ92738 828 aa12.99□□□□□ -0.33
CSPG4P12-201ENST00000558282 PSMB7Q99436 277 aa12.99□□□□□ -0.33
CSPG4P12-201ENST00000558282 SPZ1Q9BXG8 430 aa12.99□□□□□ -0.33
CSPG4P12-201ENST00000558282 MIS12Q9H081 205 aa12.99□□□□□ -0.33
CSPG4P12-201ENST00000558282 DEXIO95424 95 aa12.99□□□□□ -0.33
CSPG4P12-201ENST00000558282 PPP4R1Q8TF05 950 aa12.99□□□□□ -0.33
CSPG4P12-201ENST00000558282 PDLIM2Q96JY6 352 aa12.99□□□□□ -0.33
CSPG4P12-201ENST00000558282 OLFM3Q96PB7 478 aa12.99□□□□□ -0.33
CSPG4P12-201ENST00000558282 ZMYM4Q5VZL5 1548 aa12.98□□□□□ -0.33
CSPG4P12-201ENST00000558282 VWA3AA6NCI4 1184 aa12.98□□□□□ -0.33
CSPG4P12-201ENST00000558282 GABPB2Q8TAK5 448 aaPredicted RBP12.98□□□□□ -0.33
CSPG4P12-201ENST00000558282 TMEM87BQ96K49 555 aa12.98□□□□□ -0.33
CSPG4P12-201ENST00000558282 PAG1Q9NWQ8 432 aa12.98□□□□□ -0.33
CSPG4P12-201ENST00000558282 PPP1R1BQ9UD71 204 aaPredicted RBP12.98□□□□□ -0.33
CSPG4P12-201ENST00000558282 MAPKBP1O60336 1514 aa12.98□□□□□ -0.33
CSPG4P12-201ENST00000558282 CTNND1O60716 968 aaKnown RBP12.98□□□□□ -0.33
CSPG4P12-201ENST00000558282 IL15P40933 162 aaPredicted RBP12.98□□□□□ -0.33
CSPG4P12-201ENST00000558282 PCYT1AP49585 367 aa12.98□□□□□ -0.33
CSPG4P12-201ENST00000558282 EIF3BP55884 814 aaKnown RBP12.98□□□□□ -0.33
CSPG4P12-201ENST00000558282 CC2D1AQ6P1N0 951 aaPredicted RBP12.98□□□□□ -0.33
CSPG4P12-201ENST00000558282 CRACR2BQ8N4Y2 399 aaPredicted RBP12.98□□□□□ -0.33
CSPG4P12-201ENST00000558282 FAM135AQ9P2D6 1515 aa12.98□□□□□ -0.33
CSPG4P12-201ENST00000558282 TRIM37O94972 964 aa12.98□□□□□ -0.33
CSPG4P12-201ENST00000558282 ELF1P32519 619 aa12.98□□□□□ -0.33
CSPG4P12-201ENST00000558282 SERPINB6P35237 376 aa12.98□□□□□ -0.33
CSPG4P12-201ENST00000558282 SNX16P57768 344 aa12.98□□□□□ -0.33
CSPG4P12-201ENST00000558282 LIN9Q5TKA1 542 aa12.98□□□□□ -0.33
CSPG4P12-201ENST00000558282 FNBP4Q8N3X1 1017 aaPredicted RBP12.98□□□□□ -0.33
CSPG4P12-201ENST00000558282 CCT6BQ92526 530 aa12.98□□□□□ -0.33
CSPG4P12-201ENST00000558282 MAK16Q9BXY0 300 aaKnown RBP12.98□□□□□ -0.33
CSPG4P12-201ENST00000558282 TNNQ9UQP3 1299 aa12.98□□□□□ -0.33
CSPG4P12-201ENST00000558282 NR1I2O75469 434 aa12.97□□□□□ -0.33
CSPG4P12-201ENST00000558282 CNGA1P29973 690 aa12.97□□□□□ -0.33
CSPG4P12-201ENST00000558282 NBPF6Q5VWK0 638 aa12.97□□□□□ -0.33
CSPG4P12-201ENST00000558282 TTC19Q6DKK2 380 aaPredicted RBP12.97□□□□□ -0.33
CSPG4P12-201ENST00000558282 NBPF4Q96M43 638 aa12.97□□□□□ -0.33
CSPG4P12-201ENST00000558282 CRNKL1Q9BZJ0 848 aaKnown RBP12.97□□□□□ -0.33
CSPG4P12-201ENST00000558282 SNRKQ9NRH2 765 aa12.97□□□□□ -0.33
CSPG4P12-201ENST00000558282 STOML1Q9UBI4 398 aa12.97□□□□□ -0.33
CSPG4P12-201ENST00000558282 MTMR6Q9Y217 621 aa12.97□□□□□ -0.33
CSPG4P12-201ENST00000558282 GUCY2DQ02846 1103 aa12.97□□□□□ -0.33
CSPG4P12-201ENST00000558282 ARHGEF18Q6ZSZ5 1173 aa12.97□□□□□ -0.33
CSPG4P12-201ENST00000558282 NELFBQ8WX92 580 aa12.97□□□□□ -0.33
CSPG4P12-201ENST00000558282 ERBB4Q15303 1308 aa12.97□□□□□ -0.33
CSPG4P12-201ENST00000558282 CFAP73A6NFT4 308 aa12.97□□□□□ -0.33
CSPG4P12-201ENST00000558282 CHGBP05060 677 aa12.97□□□□□ -0.33
CSPG4P12-201ENST00000558282 ZFXP17010 805 aaPredicted RBP12.97□□□□□ -0.33
CSPG4P12-201ENST00000558282 ARHGAP4P98171 946 aa12.97□□□□□ -0.33
CSPG4P12-201ENST00000558282 BEND3Q5T5X7 828 aa12.97□□□□□ -0.33
CSPG4P12-201ENST00000558282 SLC35F6Q8N357 371 aa12.97□□□□□ -0.33
CSPG4P12-201ENST00000558282 KCNH5Q8NCM2 988 aa12.97□□□□□ -0.33
CSPG4P12-201ENST00000558282 CCDC85AQ96PX6 553 aaPredicted RBP12.97□□□□□ -0.33
CSPG4P12-201ENST00000558282 CABP5Q9NP86 173 aa12.97□□□□□ -0.33
CSPG4P12-201ENST00000558282 DNMT1P26358 1616 aaKnown RBP12.97□□□□□ -0.33
CSPG4P12-201ENST00000558282 CMA1P23946 247 aa12.97□□□□□ -0.33
CSPG4P12-201ENST00000558282 NAPAP54920 295 aa12.97□□□□□ -0.33
CSPG4P12-201ENST00000558282 SLC30A9Q6PML9 568 aa12.97□□□□□ -0.33
CSPG4P12-201ENST00000558282 SCYL3Q8IZE3 742 aa12.97□□□□□ -0.33
CSPG4P12-201ENST00000558282 NRBP1Q9UHY1 535 aa12.97□□□□□ -0.33
CSPG4P12-201ENST00000558282 FRMD4BQ9Y2L6 1034 aa12.97□□□□□ -0.33
CSPG4P12-201ENST00000558282 RGS12O14924 1447 aa12.97□□□□□ -0.33
CSPG4P12-201ENST00000558282 ADGRL2O95490 1459 aa12.97□□□□□ -0.33
CSPG4P12-201ENST00000558282 A0A1W2PQ27 194 aa12.96□□□□□ -0.33
CSPG4P12-201ENST00000558282 A0A1W2PQ64 194 aa12.96□□□□□ -0.33
CSPG4P12-201ENST00000558282 A0A1W2PQD8 194 aa12.96□□□□□ -0.33
CSPG4P12-201ENST00000558282 BAG3O95817 575 aa12.96□□□□□ -0.33
CSPG4P12-201ENST00000558282 GRAMD4Q6IC98 578 aa12.96□□□□□ -0.33
CSPG4P12-201ENST00000558282 PARP9Q8IXQ6 854 aa12.96□□□□□ -0.33
CSPG4P12-201ENST00000558282 EIF4G3O43432 1585 aaKnown RBP12.96□□□□□ -0.33
CSPG4P12-201ENST00000558282 SF3A3Q12874 501 aaKnown RBP eCLIP12.96□□□□□ -0.33
CSPG4P12-201ENST00000558282 PPP2R5BQ15173 497 aa12.96□□□□□ -0.33
CSPG4P12-201ENST00000558282 HEATR3Q7Z4Q2 680 aa12.96□□□□□ -0.33
CSPG4P12-201ENST00000558282 TRIM42Q8IWZ5 723 aa12.96□□□□□ -0.33
CSPG4P12-201ENST00000558282 ABCB6Q9NP58 842 aa12.96□□□□□ -0.33
CSPG4P12-201ENST00000558282 FGFR1OP2Q9NVK5 253 aa12.96□□□□□ -0.33
CSPG4P12-201ENST00000558282 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms