RNA–Protein interactions for RNA: ENST00000558223.5

MARK3-212, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 1 (best)

Gene MARK3, Length 908 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-212ENST00000558223 GINM1Q9NU53 330 aa8.56□□□□□ -1.04
MARK3-212ENST00000558223 PRKAG3Q9UGI9 489 aa8.56□□□□□ -1.04
MARK3-212ENST00000558223 COMMD10Q9Y6G5 202 aa8.56□□□□□ -1.04
MARK3-212ENST00000558223 ADCY9O60503 1353 aa8.56□□□□□ -1.04
MARK3-212ENST00000558223 MRC1P22897 1456 aa8.56□□□□□ -1.04
MARK3-212ENST00000558223 WNT7AO00755 349 aa8.55□□□□□ -1.04
MARK3-212ENST00000558223 AVPP01185 164 aa8.55□□□□□ -1.04
MARK3-212ENST00000558223 IFIT2P09913 472 aaKnown RBP8.55□□□□□ -1.04
MARK3-212ENST00000558223 CHMLP26374 656 aa8.55□□□□□ -1.04
MARK3-212ENST00000558223 PWP1Q13610 501 aa8.55□□□□□ -1.04
MARK3-212ENST00000558223 UBE4AQ14139 1066 aa8.55□□□□□ -1.04
MARK3-212ENST00000558223 C11orf91Q3C1V1 193 aa8.55□□□□□ -1.04
MARK3-212ENST00000558223 FOXD4L6Q3SYB3 417 aaPredicted RBP8.55□□□□□ -1.04
MARK3-212ENST00000558223 ZFYVE27Q5T4F4 411 aa8.55□□□□□ -1.04
MARK3-212ENST00000558223 FOXD4L3Q6VB84 417 aaPredicted RBP8.55□□□□□ -1.04
MARK3-212ENST00000558223 ETFBKMTQ8IXQ9 262 aa8.55□□□□□ -1.04
MARK3-212ENST00000558223 PGBD3Q8N328 593 aa8.55□□□□□ -1.04
MARK3-212ENST00000558223 CCDC113Q9H0I3 377 aa8.55□□□□□ -1.04
MARK3-212ENST00000558223 ECHDC1Q9NTX5 307 aa8.55□□□□□ -1.04
MARK3-212ENST00000558223 TMEM260Q9NX78 707 aa8.55□□□□□ -1.04
MARK3-212ENST00000558223 KCNQ3O43525 872 aa8.54□□□□□ -1.04
MARK3-212ENST00000558223 STAU1O95793 577 aaKnown RBP8.54□□□□□ -1.04
MARK3-212ENST00000558223 RPLP1P05386 114 aaKnown RBP8.54□□□□□ -1.04
MARK3-212ENST00000558223 NBPF7P0C2Y1 421 aaPredicted RBP8.54□□□□□ -1.04
MARK3-212ENST00000558223 IL2RBP14784 551 aa8.54□□□□□ -1.04
MARK3-212ENST00000558223 CNGA1P29973 690 aa8.54□□□□□ -1.04
MARK3-212ENST00000558223 SKOR1P84550 965 aa8.54□□□□□ -1.04
MARK3-212ENST00000558223 EXOSC10Q01780 885 aaKnown RBP8.54□□□□□ -1.04
MARK3-212ENST00000558223 COL9A2Q14055 689 aaPredicted RBP8.54□□□□□ -1.04
MARK3-212ENST00000558223 RAB3GAP1Q15042 981 aa8.54□□□□□ -1.04
MARK3-212ENST00000558223 PI16Q6UXB8 463 aa8.54□□□□□ -1.04
MARK3-212ENST00000558223 TOM1L2Q6ZVM7 507 aa8.54□□□□□ -1.04
MARK3-212ENST00000558223 PLBD2Q8NHP8 589 aa8.54□□□□□ -1.04
MARK3-212ENST00000558223 FOXJ1Q92949 421 aa8.54□□□□□ -1.04
MARK3-212ENST00000558223 RILPL2Q969X0 211 aa8.54□□□□□ -1.04
MARK3-212ENST00000558223 CCDC74AQ96AQ1 378 aa8.54□□□□□ -1.04
MARK3-212ENST00000558223 INTS4Q96HW7 963 aaKnown RBP8.54□□□□□ -1.04
MARK3-212ENST00000558223 RSRP1Q9BUV0 290 aa8.54□□□□□ -1.04
MARK3-212ENST00000558223 CNTN3Q9P232 1028 aa8.54□□□□□ -1.04
MARK3-212ENST00000558223 THRAP3Q9Y2W1 955 aaKnown RBP8.54□□□□□ -1.04
MARK3-212ENST00000558223 RAD50Q92878 1312 aa8.54□□□□□ -1.04
MARK3-212ENST00000558223 TTC24A2A3L6 582 aaPredicted RBP8.53□□□□□ -1.04
MARK3-212ENST00000558223 NOS2P35228 1153 aa8.53□□□□□ -1.04
MARK3-212ENST00000558223 EVA1CP58658 441 aa8.53□□□□□ -1.04
MARK3-212ENST00000558223 GCKRQ14397 625 aa8.53□□□□□ -1.04
MARK3-212ENST00000558223 MAP9Q49MG5 647 aa8.53□□□□□ -1.04
MARK3-212ENST00000558223 PTCRAQ6ISU1 281 aaPredicted RBP8.53□□□□□ -1.04
MARK3-212ENST00000558223 GPR152Q8TDT2 470 aa8.53□□□□□ -1.04
MARK3-212ENST00000558223 EPS8L3Q8TE67 593 aaKnown RBP8.53□□□□□ -1.04
MARK3-212ENST00000558223 BAP1Q92560 729 aa8.53□□□□□ -1.04
MARK3-212ENST00000558223 MRGPRX2Q96LB1 330 aa8.53□□□□□ -1.04
MARK3-212ENST00000558223 SLC4A9Q96Q91 983 aa8.53□□□□□ -1.04
MARK3-212ENST00000558223 NOC4LQ9BVI4 516 aaKnown RBP8.53□□□□□ -1.04
MARK3-212ENST00000558223 ATG3Q9NT62 314 aa8.53□□□□□ -1.04
MARK3-212ENST00000558223 BSDC1Q9NW68 430 aaPredicted RBP8.53□□□□□ -1.04
MARK3-212ENST00000558223 SCHIP1Q9P0W5 487 aaPredicted RBP8.53□□□□□ -1.04
MARK3-212ENST00000558223 PNMA2Q9UL42 364 aa8.53□□□□□ -1.04
MARK3-212ENST00000558223 KDM6AO15550 1401 aaPredicted RBP8.53□□□□□ -1.04
MARK3-212ENST00000558223 COL18A1P39060 1754 aa8.53□□□□□ -1.04
MARK3-212ENST00000558223 NEURL1BA8MQ27 555 aa8.52□□□□□ -1.05
MARK3-212ENST00000558223 MINDY4BA8MYZ0 360 aa8.52□□□□□ -1.05
MARK3-212ENST00000558223 CYP27B1O15528 508 aa8.52□□□□□ -1.05
MARK3-212ENST00000558223 CAND2O75155 1236 aa8.52□□□□□ -1.05
MARK3-212ENST00000558223 WDHD1O75717 1129 aaPredicted RBP8.52□□□□□ -1.05
MARK3-212ENST00000558223 SMPD1P17405 629 aa8.52□□□□□ -1.05
MARK3-212ENST00000558223 SOX9P48436 509 aa8.52□□□□□ -1.05
MARK3-212ENST00000558223 FOXK2Q01167 660 aa8.52□□□□□ -1.05
MARK3-212ENST00000558223 DGKZQ13574 1117 aa8.52□□□□□ -1.05
MARK3-212ENST00000558223 TNNI3KQ59H18 835 aa8.52□□□□□ -1.05
MARK3-212ENST00000558223 COPS6Q7L5N1 327 aa8.52□□□□□ -1.05
MARK3-212ENST00000558223 KRT26Q7Z3Y9 468 aa8.52□□□□□ -1.05
MARK3-212ENST00000558223 CRIPAKQ8N1N5 446 aa8.52□□□□□ -1.05
MARK3-212ENST00000558223 SNIP1Q8TAD8 396 aaKnown RBP8.52□□□□□ -1.05
MARK3-212ENST00000558223 OTUD7AQ8TE49 926 aaPredicted RBP8.52□□□□□ -1.05
MARK3-212ENST00000558223 IFT43Q96FT9 208 aa8.52□□□□□ -1.05
MARK3-212ENST00000558223 ZNF496Q96IT1 587 aaPredicted RBP8.52□□□□□ -1.05
MARK3-212ENST00000558223 ADAMTS1Q9UHI8 967 aa8.52□□□□□ -1.05
MARK3-212ENST00000558223 RFX7Q2KHR2 1363 aa8.51□□□□□ -1.05
MARK3-212ENST00000558223 MEGF6O75095 1541 aa8.51□□□□□ -1.05
MARK3-212ENST00000558223 A0A0U1RQG5 324 aaPredicted RBP8.51□□□□□ -1.05
MARK3-212ENST00000558223 A6NJY4 79 aa8.51□□□□□ -1.05
MARK3-212ENST00000558223 SGSM2O43147 1006 aa8.51□□□□□ -1.05
MARK3-212ENST00000558223 VIL1P09327 827 aaKnown RBP8.51□□□□□ -1.05
MARK3-212ENST00000558223 GBP2P32456 591 aaPredicted RBP8.51□□□□□ -1.05
MARK3-212ENST00000558223 HSPA4P34932 840 aa8.51□□□□□ -1.05
MARK3-212ENST00000558223 EIF4A3P38919 411 aaKnown RBP8.51□□□□□ -1.05
MARK3-212ENST00000558223 ERVK-9P63128 1117 aa8.51□□□□□ -1.05
MARK3-212ENST00000558223 LRRFIP1Q32MZ4 808 aaKnown RBP8.51□□□□□ -1.05
MARK3-212ENST00000558223 RABL6Q3YEC7 729 aaPredicted RBP8.51□□□□□ -1.05
MARK3-212ENST00000558223 LINC01559Q495D7 138 aa8.51□□□□□ -1.05
MARK3-212ENST00000558223 RC3H1Q5TC82 1133 aaKnown RBP8.51□□□□□ -1.05
MARK3-212ENST00000558223 PI4K2BQ8TCG2 481 aa8.51□□□□□ -1.05
MARK3-212ENST00000558223 XAGE3Q8WTP9 111 aa8.51□□□□□ -1.05
MARK3-212ENST00000558223 CHMP4CQ96CF2 233 aa8.51□□□□□ -1.05
MARK3-212ENST00000558223 EAF1Q96JC9 268 aaPredicted RBP8.51□□□□□ -1.05
MARK3-212ENST00000558223 KCTD15Q96SI1 283 aaPredicted RBP8.51□□□□□ -1.05
MARK3-212ENST00000558223 TM6SF1Q9BZW5 370 aa8.51□□□□□ -1.05
MARK3-212ENST00000558223 MAF1Q9H063 256 aa8.51□□□□□ -1.05
MARK3-212ENST00000558223 ETNK1Q9HBU6 452 aa8.51□□□□□ -1.05
MARK3-212ENST00000558223 GPR108Q9NPR9 543 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms