RNA–Protein interactions for RNA: ENST00000558211.2

HMGB1P8-201, Transcript of high mobility group box 1 pseudogene 8, humanhuman

BASIC

Gene HMGB1P8, Length 949 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P8-201ENST00000558211 GGA3Q9NZ52 723 aa14.46□□□□□ -0.09
HMGB1P8-201ENST00000558211 ZNF70Q9UC06 446 aaPredicted RBP14.46□□□□□ -0.09
HMGB1P8-201ENST00000558211 TCP10L2B9ZVM9 353 aa14.45□□□□□ -0.1
HMGB1P8-201ENST00000558211 IGSF3O75054 1194 aa14.45□□□□□ -0.1
HMGB1P8-201ENST00000558211 SH3RF3Q8TEJ3 882 aaPredicted RBP14.45□□□□□ -0.1
HMGB1P8-201ENST00000558211 DCPSQ96C86 337 aaKnown RBP14.45□□□□□ -0.1
HMGB1P8-201ENST00000558211 SEC62Q99442 399 aaKnown RBP14.45□□□□□ -0.1
HMGB1P8-201ENST00000558211 PUS7LQ9H0K6 701 aaKnown RBP14.45□□□□□ -0.1
HMGB1P8-201ENST00000558211 DIAPH3Q9NSV4 1193 aa14.45□□□□□ -0.1
HMGB1P8-201ENST00000558211 TMOD2Q9NZR1 351 aa14.45□□□□□ -0.1
HMGB1P8-201ENST00000558211 ECM29Q5VYK3 1845 aa14.44□□□□□ -0.1
HMGB1P8-201ENST00000558211 NMIQ13287 307 aaPredicted RBP14.44□□□□□ -0.1
HMGB1P8-201ENST00000558211 PICALMQ13492 652 aa14.44□□□□□ -0.1
HMGB1P8-201ENST00000558211 BMP2KLQ5H9B9 411 aa14.44□□□□□ -0.1
HMGB1P8-201ENST00000558211 MAP1SQ66K74 1059 aaPredicted RBP14.44□□□□□ -0.1
HMGB1P8-201ENST00000558211 LDHDQ86WU2 507 aa14.44□□□□□ -0.1
HMGB1P8-201ENST00000558211 TEX11Q8IYF3 940 aa14.44□□□□□ -0.1
HMGB1P8-201ENST00000558211 ANKLE1Q8NAG6 615 aa14.44□□□□□ -0.1
HMGB1P8-201ENST00000558211 APPBP2Q92624 585 aa14.44□□□□□ -0.1
HMGB1P8-201ENST00000558211 OSBP2Q969R2 916 aa14.44□□□□□ -0.1
HMGB1P8-201ENST00000558211 AIDAQ96BJ3 306 aa14.44□□□□□ -0.1
HMGB1P8-201ENST00000558211 FAM227BQ96M60 508 aa14.44□□□□□ -0.1
HMGB1P8-201ENST00000558211 ARMT1Q9H993 441 aa14.44□□□□□ -0.1
HMGB1P8-201ENST00000558211 M0R2C6 588 aa14.43□□□□□ -0.1
HMGB1P8-201ENST00000558211 MBD4O95243 580 aa14.43□□□□□ -0.1
HMGB1P8-201ENST00000558211 RFC5P40937 340 aa14.43□□□□□ -0.1
HMGB1P8-201ENST00000558211 TCP10Q12799 353 aa14.43□□□□□ -0.1
HMGB1P8-201ENST00000558211 ZMYM1Q5SVZ6 1142 aa14.43□□□□□ -0.1
HMGB1P8-201ENST00000558211 CWC27Q6UX04 472 aaKnown RBP14.43□□□□□ -0.1
HMGB1P8-201ENST00000558211 CCDC129Q6ZRS4 1044 aa14.43□□□□□ -0.1
HMGB1P8-201ENST00000558211 LCORLQ8N3X6 602 aa14.43□□□□□ -0.1
HMGB1P8-201ENST00000558211 A0A0D9SFI3 127 aa14.42□□□□□ -0.1
HMGB1P8-201ENST00000558211 HIP1O00291 1037 aa14.42□□□□□ -0.1
HMGB1P8-201ENST00000558211 RHBDL3P58872 404 aa14.42□□□□□ -0.1
HMGB1P8-201ENST00000558211 NFIAQ12857 509 aa14.42□□□□□ -0.1
HMGB1P8-201ENST00000558211 TMED8Q6PL24 325 aaPredicted RBP14.42□□□□□ -0.1
HMGB1P8-201ENST00000558211 DLK2Q6UY11 383 aa14.42□□□□□ -0.1
HMGB1P8-201ENST00000558211 USP48Q86UV5 1035 aa14.42□□□□□ -0.1
HMGB1P8-201ENST00000558211 TGFBRAP1Q8WUH2 860 aa14.42□□□□□ -0.1
HMGB1P8-201ENST00000558211 RIOK1Q9BRS2 568 aaKnown RBP14.42□□□□□ -0.1
HMGB1P8-201ENST00000558211 ADM5C9JUS6 153 aa14.41□□□□□ -0.1
HMGB1P8-201ENST00000558211 CHMLP26374 656 aa14.41□□□□□ -0.1
HMGB1P8-201ENST00000558211 USP5P45974 858 aa14.41□□□□□ -0.1
HMGB1P8-201ENST00000558211 PRAMEF18Q5VWM3 479 aa14.41□□□□□ -0.1
HMGB1P8-201ENST00000558211 KRT26Q7Z3Y9 468 aa14.41□□□□□ -0.1
HMGB1P8-201ENST00000558211 APOBEC3FQ8IUX4 373 aaKnown RBP14.41□□□□□ -0.1
HMGB1P8-201ENST00000558211 MAPKAPK5Q8IW41 473 aa14.41□□□□□ -0.1
HMGB1P8-201ENST00000558211 GLIS2Q9BZE0 524 aaPredicted RBP14.41□□□□□ -0.1
HMGB1P8-201ENST00000558211 HELLSQ9NRZ9 838 aa14.41□□□□□ -0.1
HMGB1P8-201ENST00000558211 RFX7Q2KHR2 1363 aa14.4□□□□□ -0.1
HMGB1P8-201ENST00000558211 GPAA1O43292 621 aa14.4□□□□□ -0.1
HMGB1P8-201ENST00000558211 PRKAB2O43741 272 aa14.4□□□□□ -0.1
HMGB1P8-201ENST00000558211 WDHD1O75717 1129 aaPredicted RBP14.4□□□□□ -0.1
HMGB1P8-201ENST00000558211 TNNI2P48788 182 aa14.4□□□□□ -0.1
HMGB1P8-201ENST00000558211 PTPRNQ16849 979 aa14.4□□□□□ -0.1
HMGB1P8-201ENST00000558211 MCMDC2Q4G0Z9 681 aa14.4□□□□□ -0.1
HMGB1P8-201ENST00000558211 LYPD8Q6UX82 237 aa14.4□□□□□ -0.1
HMGB1P8-201ENST00000558211 CDC37L1Q7L3B6 337 aa14.4□□□□□ -0.1
HMGB1P8-201ENST00000558211 SDR42E1Q8WUS8 393 aa14.4□□□□□ -0.1
HMGB1P8-201ENST00000558211 STRBPQ96SI9 672 aaKnown RBP14.4□□□□□ -0.1
HMGB1P8-201ENST00000558211 CRNKL1Q9BZJ0 848 aaKnown RBP14.4□□□□□ -0.1
HMGB1P8-201ENST00000558211 DDX4Q9NQI0 724 aaKnown RBP14.4□□□□□ -0.1
HMGB1P8-201ENST00000558211 PGAP2Q9UHJ9 254 aa14.4□□□□□ -0.1
HMGB1P8-201ENST00000558211 FCF1Q9Y324 198 aaKnown RBP14.4□□□□□ -0.1
HMGB1P8-201ENST00000558211 SLC4A4Q9Y6R1 1079 aa14.4□□□□□ -0.1
HMGB1P8-201ENST00000558211 CDK5RAP2Q96SN8 1893 aa14.4□□□□□ -0.1
HMGB1P8-201ENST00000558211 PITPNM2Q9BZ72 1349 aa14.4□□□□□ -0.1
HMGB1P8-201ENST00000558211 TOMM70O94826 608 aa14.39□□□□□ -0.11
HMGB1P8-201ENST00000558211 APPP05067 770 aa14.39□□□□□ -0.11
HMGB1P8-201ENST00000558211 FMR1Q06787 632 aaKnown RBP eCLIP14.39□□□□□ -0.11
HMGB1P8-201ENST00000558211 TNFAIP1Q13829 316 aa14.39□□□□□ -0.11
HMGB1P8-201ENST00000558211 RASA3Q14644 834 aa14.39□□□□□ -0.11
HMGB1P8-201ENST00000558211 SLC4A8Q2Y0W8 1093 aa14.39□□□□□ -0.11
HMGB1P8-201ENST00000558211 PLA2G2CQ5R387 149 aa14.39□□□□□ -0.11
HMGB1P8-201ENST00000558211 CERS3Q8IU89 383 aa14.39□□□□□ -0.11
HMGB1P8-201ENST00000558211 ZSCAN29Q8IWY8 852 aaPredicted RBP14.39□□□□□ -0.11
HMGB1P8-201ENST00000558211 ZFPM1Q8IX07 1006 aa14.39□□□□□ -0.11
HMGB1P8-201ENST00000558211 TMEM39BQ9GZU3 492 aa14.39□□□□□ -0.11
HMGB1P8-201ENST00000558211 DEFB129Q9H1M3 183 aa14.39□□□□□ -0.11
HMGB1P8-201ENST00000558211 SAP30BPQ9UHR5 308 aaKnown RBP14.39□□□□□ -0.11
HMGB1P8-201ENST00000558211 TRAF5O00463 557 aa14.38□□□□□ -0.11
HMGB1P8-201ENST00000558211 CDC45O75419 566 aa14.38□□□□□ -0.11
HMGB1P8-201ENST00000558211 ZNF589Q86UQ0 364 aaPredicted RBP14.38□□□□□ -0.11
HMGB1P8-201ENST00000558211 TICAM2Q86XR7 235 aa14.38□□□□□ -0.11
HMGB1P8-201ENST00000558211 SMC1BQ8NDV3 1235 aa14.38□□□□□ -0.11
HMGB1P8-201ENST00000558211 RUFY2Q8WXA3 655 aa14.38□□□□□ -0.11
HMGB1P8-201ENST00000558211 EMID1Q96A84 441 aaPredicted RBP14.38□□□□□ -0.11
HMGB1P8-201ENST00000558211 IDI2Q9BXS1 227 aa14.38□□□□□ -0.11
HMGB1P8-201ENST00000558211 ZNF408Q9H9D4 720 aa14.38□□□□□ -0.11
HMGB1P8-201ENST00000558211 CNTNAP1P78357 1384 aa14.37□□□□□ -0.11
HMGB1P8-201ENST00000558211 FKBP1CQ5VVH2 108 aa14.37□□□□□ -0.11
HMGB1P8-201ENST00000558211 CASC1Q6TDU7 716 aa14.37□□□□□ -0.11
HMGB1P8-201ENST00000558211 FAM151AQ8WW52 585 aa14.37□□□□□ -0.11
HMGB1P8-201ENST00000558211 IL25Q9H293 177 aa14.37□□□□□ -0.11
HMGB1P8-201ENST00000558211 FLT1P17948 1338 aa14.37□□□□□ -0.11
HMGB1P8-201ENST00000558211 CCDC171Q6TFL3 1326 aa14.37□□□□□ -0.11
HMGB1P8-201ENST00000558211 MYH1P12882 1939 aa14.37□□□□□ -0.11
HMGB1P8-201ENST00000558211 BAZ2AQ9UIF9 1905 aaKnown RBP14.37□□□□□ -0.11
HMGB1P8-201ENST00000558211 PATL2C9JE40 543 aaKnown RBP14.36□□□□□ -0.11
HMGB1P8-201ENST00000558211 ENTPD3O75355 529 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms