RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 NOL10Q9BSC4 688 aaKnown RBP6.41□□□□□ -1.38
SPG11-208ENST00000558155 PAGR1Q9BTK6 254 aa6.41□□□□□ -1.38
SPG11-208ENST00000558155 TRIM34Q9BYJ4 488 aa6.41□□□□□ -1.38
SPG11-208ENST00000558155 TXNRD2Q9NNW7 524 aa6.41□□□□□ -1.38
SPG11-208ENST00000558155 DDX20Q9UHI6 824 aaKnown RBP6.41□□□□□ -1.38
SPG11-208ENST00000558155 AKAP2Q9Y2D5 859 aa6.41□□□□□ -1.38
SPG11-208ENST00000558155 PTPRCP08575 1304 aa6.41□□□□□ -1.38
SPG11-208ENST00000558155 PDS5AQ29RF7 1337 aaKnown RBP6.41□□□□□ -1.38
SPG11-208ENST00000558155 PLXNB2O15031 1838 aa6.41□□□□□ -1.38
SPG11-208ENST00000558155 SLC15A5A6NIM6 579 aa6.4□□□□□ -1.38
SPG11-208ENST00000558155 TNFRSF10AO00220 468 aa6.4□□□□□ -1.38
SPG11-208ENST00000558155 DNM1LO00429 736 aa6.4□□□□□ -1.38
SPG11-208ENST00000558155 FOSL2P15408 326 aa6.4□□□□□ -1.38
SPG11-208ENST00000558155 RTP1P59025 263 aa6.4□□□□□ -1.38
SPG11-208ENST00000558155 TIMM10P62072 90 aa6.4□□□□□ -1.38
SPG11-208ENST00000558155 RASGRF1Q13972 1273 aa6.4□□□□□ -1.38
SPG11-208ENST00000558155 RRP1BQ14684 758 aaKnown RBP6.4□□□□□ -1.38
SPG11-208ENST00000558155 MVPQ14764 893 aaKnown RBP6.4□□□□□ -1.38
SPG11-208ENST00000558155 USP17L2Q6R6M4 530 aa6.4□□□□□ -1.38
SPG11-208ENST00000558155 SLC39A5Q6ZMH5 540 aa6.4□□□□□ -1.38
SPG11-208ENST00000558155 TEX11Q8IYF3 940 aa6.4□□□□□ -1.38
SPG11-208ENST00000558155 MYLIPQ8WY64 445 aa6.4□□□□□ -1.38
SPG11-208ENST00000558155 PORCNQ9H237 461 aa6.4□□□□□ -1.38
SPG11-208ENST00000558155 ATP11BQ9Y2G3 1177 aa6.4□□□□□ -1.38
SPG11-208ENST00000558155 RABGAP1Q9Y3P9 1069 aa6.4□□□□□ -1.38
SPG11-208ENST00000558155 IVNS1ABPQ9Y6Y0 642 aa6.4□□□□□ -1.38
SPG11-208ENST00000558155 RFX7Q2KHR2 1363 aa6.4□□□□□ -1.39
SPG11-208ENST00000558155 LOC285556D6RIA3 1793 aa6.39□□□□□ -1.39
SPG11-208ENST00000558155 TMEM265A0A087WTH1 108 aa6.39□□□□□ -1.39
SPG11-208ENST00000558155 USP17L15C9J2P7 530 aa6.39□□□□□ -1.39
SPG11-208ENST00000558155 USP17L13C9JLJ4 530 aa6.39□□□□□ -1.39
SPG11-208ENST00000558155 KBTBD13C9JR72 458 aa6.39□□□□□ -1.39
SPG11-208ENST00000558155 USP17L11C9JVI0 530 aa6.39□□□□□ -1.39
SPG11-208ENST00000558155 USP17L18D6R9N7 530 aa6.39□□□□□ -1.39
SPG11-208ENST00000558155 USP17L22D6RA61 530 aa6.39□□□□□ -1.39
SPG11-208ENST00000558155 USP17L17D6RBQ6 530 aa6.39□□□□□ -1.39
SPG11-208ENST00000558155 USP17L19D6RCP7 530 aa6.39□□□□□ -1.39
SPG11-208ENST00000558155 USP17L20D6RJB6 530 aa6.39□□□□□ -1.39
SPG11-208ENST00000558155 PEX10O60683 326 aa6.39□□□□□ -1.39
SPG11-208ENST00000558155 BAG3O95817 575 aa6.39□□□□□ -1.39
SPG11-208ENST00000558155 UBTFL1P0CB47 393 aaPredicted RBP6.39□□□□□ -1.39
SPG11-208ENST00000558155 PTPREP23469 700 aa6.39□□□□□ -1.39
SPG11-208ENST00000558155 ADORA1P30542 326 aa6.39□□□□□ -1.39
SPG11-208ENST00000558155 USP17L24Q0WX57 530 aa6.39□□□□□ -1.39
SPG11-208ENST00000558155 TJAP1Q5JTD0 557 aa6.39□□□□□ -1.39
SPG11-208ENST00000558155 GORABQ5T7V8 394 aa6.39□□□□□ -1.39
SPG11-208ENST00000558155 WDR78Q5VTH9 848 aa6.39□□□□□ -1.39
SPG11-208ENST00000558155 ATF7IPQ6VMQ6 1270 aa6.39□□□□□ -1.39
SPG11-208ENST00000558155 CRACR2BQ8N4Y2 399 aaPredicted RBP6.39□□□□□ -1.39
SPG11-208ENST00000558155 EFCAB3Q8N7B9 438 aa6.39□□□□□ -1.39
SPG11-208ENST00000558155 BADQ92934 168 aa6.39□□□□□ -1.39
SPG11-208ENST00000558155 NSUN4Q96CB9 384 aaKnown RBP6.39□□□□□ -1.39
SPG11-208ENST00000558155 XAGE2Q96GT9 111 aa6.39□□□□□ -1.39
SPG11-208ENST00000558155 NEUROD6Q96NK8 337 aa6.39□□□□□ -1.39
SPG11-208ENST00000558155 TTYH1Q9H313 450 aaPredicted RBP6.39□□□□□ -1.39
SPG11-208ENST00000558155 MRS2Q9HD23 443 aa6.39□□□□□ -1.39
SPG11-208ENST00000558155 COPRSQ9NQ92 184 aa6.39□□□□□ -1.39
SPG11-208ENST00000558155 PRDM5Q9NQX1 630 aaPredicted RBP6.39□□□□□ -1.39
SPG11-208ENST00000558155 RAI14Q9P0K7 980 aa6.39□□□□□ -1.39
SPG11-208ENST00000558155 COL2A1P02458 1487 aaPredicted RBP6.39□□□□□ -1.39
SPG11-208ENST00000558155 ATAD5Q96QE3 1844 aa6.39□□□□□ -1.39
SPG11-208ENST00000558155 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.38□□□□□ -1.39
SPG11-208ENST00000558155 A0A1B0GUL7 405 aa6.38□□□□□ -1.39
SPG11-208ENST00000558155 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.38□□□□□ -1.39
SPG11-208ENST00000558155 HOXC6P09630 235 aa6.38□□□□□ -1.39
SPG11-208ENST00000558155 USP14P54578 494 aa6.38□□□□□ -1.39
SPG11-208ENST00000558155 C9orf50Q5SZB4 431 aa6.38□□□□□ -1.39
SPG11-208ENST00000558155 GJC2Q5T442 439 aaPredicted RBP6.38□□□□□ -1.39
SPG11-208ENST00000558155 TBC1D9Q6ZT07 1266 aa6.38□□□□□ -1.39
SPG11-208ENST00000558155 DPP9Q86TI2 863 aa6.38□□□□□ -1.39
SPG11-208ENST00000558155 ZNF687Q8N1G0 1237 aa6.38□□□□□ -1.39
SPG11-208ENST00000558155 SPATA5Q8NB90 893 aa6.38□□□□□ -1.39
SPG11-208ENST00000558155 EMILIN3Q9NT22 766 aa6.38□□□□□ -1.39
SPG11-208ENST00000558155 SLC5A4Q9NY91 659 aa6.38□□□□□ -1.39
SPG11-208ENST00000558155 LRP2BPQ9P2M1 347 aa6.38□□□□□ -1.39
SPG11-208ENST00000558155 PA2G4Q9UQ80 394 aaKnown RBP6.38□□□□□ -1.39
SPG11-208ENST00000558155 TACC3Q9Y6A5 838 aa6.38□□□□□ -1.39
SPG11-208ENST00000558155 NDUFB9Q9Y6M9 179 aa6.38□□□□□ -1.39
SPG11-208ENST00000558155 RANBP2P49792 3224 aaKnown RBP6.38□□□□□ -1.39
SPG11-208ENST00000558155 STRNO43815 780 aa6.37□□□□□ -1.39
SPG11-208ENST00000558155 GDF11O95390 407 aa6.37□□□□□ -1.39
SPG11-208ENST00000558155 HLA-DOAP06340 250 aa6.37□□□□□ -1.39
SPG11-208ENST00000558155 UQCRFS1P1P0C7P4 283 aa6.37□□□□□ -1.39
SPG11-208ENST00000558155 CYP2C19P33261 490 aa6.37□□□□□ -1.39
SPG11-208ENST00000558155 PPP4CP60510 307 aa6.37□□□□□ -1.39
SPG11-208ENST00000558155 SNX17Q15036 470 aa6.37□□□□□ -1.39
SPG11-208ENST00000558155 C1orf53Q5VUE5 145 aa6.37□□□□□ -1.39
SPG11-208ENST00000558155 CATSPERGQ6ZRH7 1159 aa6.37□□□□□ -1.39
SPG11-208ENST00000558155 METTL16Q86W50 562 aaKnown RBP6.37□□□□□ -1.39
SPG11-208ENST00000558155 NPLOC4Q8TAT6 608 aa6.37□□□□□ -1.39
SPG11-208ENST00000558155 SH3RF3Q8TEJ3 882 aaPredicted RBP6.37□□□□□ -1.39
SPG11-208ENST00000558155 ZNF384Q8TF68 577 aa6.37□□□□□ -1.39
SPG11-208ENST00000558155 TGFBRAP1Q8WUH2 860 aa6.37□□□□□ -1.39
SPG11-208ENST00000558155 SSH1Q8WYL5 1049 aa6.37□□□□□ -1.39
SPG11-208ENST00000558155 FAM122AQ96E09 287 aa6.37□□□□□ -1.39
SPG11-208ENST00000558155 RNPC3Q96LT9 517 aaKnown RBP6.37□□□□□ -1.39
SPG11-208ENST00000558155 HOXC10Q9NYD6 342 aa6.37□□□□□ -1.39
SPG11-208ENST00000558155 FLRT1Q9NZU1 646 aa6.37□□□□□ -1.39
SPG11-208ENST00000558155 HMG20BQ9P0W2 317 aa6.37□□□□□ -1.39
SPG11-208ENST00000558155 ZBTB21Q9ULJ3 1066 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms