RNA–Protein interactions for RNA: ENST00000558036.5

SNRPA1-205, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,108 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-205ENST00000558036 NT5C2P49902 561 aa23.75■■□□□ 1.39
SNRPA1-205ENST00000558036 NBPF11Q86T75 865 aa23.75■■□□□ 1.39
SNRPA1-205ENST00000558036 TMEM47Q9BQJ4 181 aa23.75■■□□□ 1.39
SNRPA1-205ENST00000558036 MYOZ2Q9NPC6 264 aa23.75■■□□□ 1.39
SNRPA1-205ENST00000558036 ATP6V1DQ9Y5K8 247 aa23.75■■□□□ 1.39
SNRPA1-205ENST00000558036 ZNF541Q9H0D2 1346 aa23.75■■□□□ 1.39
SNRPA1-205ENST00000558036 FMNL1O95466 1100 aaPredicted RBP23.75■■□□□ 1.39
SNRPA1-205ENST00000558036 SSRP1Q08945 709 aaKnown RBP23.75■■□□□ 1.39
SNRPA1-205ENST00000558036 RBM26Q5T8P6 1007 aaKnown RBP23.75■■□□□ 1.39
SNRPA1-205ENST00000558036 ALG1Q9BT22 464 aa23.75■■□□□ 1.39
SNRPA1-205ENST00000558036 EHD4Q9H223 541 aa23.75■■□□□ 1.39
SNRPA1-205ENST00000558036 TMOD2Q9NZR1 351 aa23.75■■□□□ 1.39
SNRPA1-205ENST00000558036 PI4KBQ9UBF8 816 aa23.75■■□□□ 1.39
SNRPA1-205ENST00000558036 SWAP70Q9UH65 585 aa23.75■■□□□ 1.39
SNRPA1-205ENST00000558036 SCAF8Q9UPN6 1271 aaKnown RBP23.75■■□□□ 1.39
SNRPA1-205ENST00000558036 NPM3O75607 178 aaKnown RBP23.74■■□□□ 1.39
SNRPA1-205ENST00000558036 GMPSP49915 693 aaPredicted RBP23.74■■□□□ 1.39
SNRPA1-205ENST00000558036 EIF6P56537 245 aaKnown RBP23.74■■□□□ 1.39
SNRPA1-205ENST00000558036 RESTQ13127 1097 aa23.74■■□□□ 1.39
SNRPA1-205ENST00000558036 SPDYE2Q495Y8 402 aa23.74■■□□□ 1.39
SNRPA1-205ENST00000558036 RASGRP2Q7LDG7 609 aa23.74■■□□□ 1.39
SNRPA1-205ENST00000558036 ANKS1AQ92625 1134 aa23.74■■□□□ 1.39
SNRPA1-205ENST00000558036 WNT10BO00744 389 aa23.74■■□□□ 1.39
SNRPA1-205ENST00000558036 ENTPD3O75355 529 aa23.74■■□□□ 1.39
SNRPA1-205ENST00000558036 CALM1P0DP23 149 aa23.74■■□□□ 1.39
SNRPA1-205ENST00000558036 CALM2P0DP24 149 aa23.74■■□□□ 1.39
SNRPA1-205ENST00000558036 CALM3P0DP25 149 aa23.74■■□□□ 1.39
SNRPA1-205ENST00000558036 SHROOM1Q2M3G4 852 aaPredicted RBP23.74■■□□□ 1.39
SNRPA1-205ENST00000558036 hCG_1642624A0A1W2PR95 340 aa23.73■■□□□ 1.39
SNRPA1-205ENST00000558036 FBXO18Q8NFZ0 1043 aa23.73■■□□□ 1.39
SNRPA1-205ENST00000558036 CTCFLQ8NI51 663 aaPredicted RBP23.73■■□□□ 1.39
SNRPA1-205ENST00000558036 MPHOSPH10O00566 681 aaKnown RBP23.72■■□□□ 1.39
SNRPA1-205ENST00000558036 FIBPO43427 364 aa23.72■■□□□ 1.39
SNRPA1-205ENST00000558036 CCDC178Q5BJE1 867 aa23.72■■□□□ 1.39
SNRPA1-205ENST00000558036 CSRNP1Q96S65 589 aa23.72■■□□□ 1.39
SNRPA1-205ENST00000558036 FUT2Q10981 343 aa23.72■■□□□ 1.39
SNRPA1-205ENST00000558036 CDAN1Q8IWY9 1227 aa23.72■■□□□ 1.39
SNRPA1-205ENST00000558036 MICALL2Q8IY33 904 aa23.72■■□□□ 1.39
SNRPA1-205ENST00000558036 TRIM22Q8IYM9 498 aa23.72■■□□□ 1.39
SNRPA1-205ENST00000558036 MTMR14Q8NCE2 650 aa23.72■■□□□ 1.39
SNRPA1-205ENST00000558036 SIPA1L1O43166 1804 aa23.72■■□□□ 1.39
SNRPA1-205ENST00000558036 CNTNAP1P78357 1384 aa23.71■■□□□ 1.39
SNRPA1-205ENST00000558036 ATRNL1Q5VV63 1379 aa23.71■■□□□ 1.39
SNRPA1-205ENST00000558036 PPP2R5BQ15173 497 aa23.71■■□□□ 1.39
SNRPA1-205ENST00000558036 SAMD7Q7Z3H4 446 aa23.71■■□□□ 1.39
SNRPA1-205ENST00000558036 ZBED3Q96IU2 234 aaPredicted RBP23.71■■□□□ 1.39
SNRPA1-205ENST00000558036 TRIM34Q9BYJ4 488 aa23.71■■□□□ 1.39
SNRPA1-205ENST00000558036 RBM28Q9NW13 759 aaKnown RBP23.71■■□□□ 1.39
SNRPA1-205ENST00000558036 STK36Q9NRP7 1315 aa23.71■■□□□ 1.39
SNRPA1-205ENST00000558036 TMTC3Q6ZXV5 915 aa23.71■■□□□ 1.39
SNRPA1-205ENST00000558036 USP48Q86UV5 1035 aa23.71■■□□□ 1.39
SNRPA1-205ENST00000558036 SRBD1Q8N5C6 995 aaKnown RBP23.71■■□□□ 1.39
SNRPA1-205ENST00000558036 MTMR4Q9NYA4 1195 aa23.71■■□□□ 1.39
SNRPA1-205ENST00000558036 YBX3P16989 372 aaKnown RBP eCLIP23.7■■□□□ 1.38
SNRPA1-205ENST00000558036 LMNB1P20700 586 aa23.7■■□□□ 1.38
SNRPA1-205ENST00000558036 TPRNQ4KMQ1 711 aa23.7■■□□□ 1.38
SNRPA1-205ENST00000558036 STAG2Q8N3U4 1231 aa23.7■■□□□ 1.38
SNRPA1-205ENST00000558036 TMEM39BQ9GZU3 492 aa23.7■■□□□ 1.38
SNRPA1-205ENST00000558036 TFIP11Q9UBB9 837 aaKnown RBP23.7■■□□□ 1.38
SNRPA1-205ENST00000558036 PLIN4Q96Q06 1357 aa23.7■■□□□ 1.38
SNRPA1-205ENST00000558036 RPS12P25398 132 aaKnown RBP23.69■■□□□ 1.38
SNRPA1-205ENST00000558036 ZNF280AP59817 542 aaPredicted RBP23.69■■□□□ 1.38
SNRPA1-205ENST00000558036 PIBF1Q8WXW3 757 aa23.69■■□□□ 1.38
SNRPA1-205ENST00000558036 GZF1Q9H116 711 aaPredicted RBP23.69■■□□□ 1.38
SNRPA1-205ENST00000558036 CNOT7Q9UIV1 285 aaKnown RBP23.69■■□□□ 1.38
SNRPA1-205ENST00000558036 MYO1BO43795 1136 aa23.69■■□□□ 1.38
SNRPA1-205ENST00000558036 TBC1D10BQ4KMP7 808 aaPredicted RBP23.69■■□□□ 1.38
SNRPA1-205ENST00000558036 ZSCAN16Q9H4T2 348 aaPredicted RBP23.69■■□□□ 1.38
SNRPA1-205ENST00000558036 V9GY48 417 aaPredicted RBP23.69■■□□□ 1.38
SNRPA1-205ENST00000558036 IGKV6D-41A0A0C4DH26 115 aa23.68■■□□□ 1.38
SNRPA1-205ENST00000558036 CERKLQ49MI3 558 aaPredicted RBP23.68■■□□□ 1.38
SNRPA1-205ENST00000558036 KRT40Q6A162 431 aa23.68■■□□□ 1.38
SNRPA1-205ENST00000558036 FOXP4Q8IVH2 680 aaPredicted RBP23.68■■□□□ 1.38
SNRPA1-205ENST00000558036 LRRC47Q8N1G4 583 aaKnown RBP23.68■■□□□ 1.38
SNRPA1-205ENST00000558036 FAM151AQ8WW52 585 aa23.68■■□□□ 1.38
SNRPA1-205ENST00000558036 DDX49Q9Y6V7 483 aaKnown RBP23.68■■□□□ 1.38
SNRPA1-205ENST00000558036 ASTN2O75129 1339 aaPredicted RBP23.68■■□□□ 1.38
SNRPA1-205ENST00000558036 GADD45BO75293 160 aaPredicted RBP23.68■■□□□ 1.38
SNRPA1-205ENST00000558036 GDF11O95390 407 aa23.68■■□□□ 1.38
SNRPA1-205ENST00000558036 DEXIO95424 95 aa23.68■■□□□ 1.38
SNRPA1-205ENST00000558036 GOLGA8HP0CJ92 632 aa23.68■■□□□ 1.38
SNRPA1-205ENST00000558036 RNF26Q9BY78 433 aaPredicted RBP23.68■■□□□ 1.38
SNRPA1-205ENST00000558036 MAD2L2Q9UI95 211 aa23.68■■□□□ 1.38
SNRPA1-205ENST00000558036 KIF28PB7ZC32 967 aa23.67■■□□□ 1.38
SNRPA1-205ENST00000558036 TOP1P11387 765 aaKnown RBP23.67■■□□□ 1.38
SNRPA1-205ENST00000558036 KIF5BP33176 963 aa23.67■■□□□ 1.38
SNRPA1-205ENST00000558036 NOVP48745 357 aa23.67■■□□□ 1.38
SNRPA1-205ENST00000558036 ATP2B2Q01814 1243 aa23.67■■□□□ 1.38
SNRPA1-205ENST00000558036 CLIP2Q9UDT6 1046 aa23.67■■□□□ 1.38
SNRPA1-205ENST00000558036 CNTNAP5Q8WYK1 1306 aa23.67■■□□□ 1.38
SNRPA1-205ENST00000558036 PTMSP20962 102 aa23.66■■□□□ 1.38
SNRPA1-205ENST00000558036 AKAP17AQ02040 695 aaKnown RBP23.66■■□□□ 1.38
SNRPA1-205ENST00000558036 GRM4Q14833 912 aa23.66■■□□□ 1.38
SNRPA1-205ENST00000558036 TATDN1Q6P1N9 297 aa23.66■■□□□ 1.38
SNRPA1-205ENST00000558036 GPT2Q8TD30 523 aa23.66■■□□□ 1.38
SNRPA1-205ENST00000558036 DPF2Q92785 391 aa23.66■■□□□ 1.38
SNRPA1-205ENST00000558036 FTOQ9C0B1 505 aaKnown RBP eCLIP23.66■■□□□ 1.38
SNRPA1-205ENST00000558036 KCNJ14Q9UNX9 436 aa23.66■■□□□ 1.38
SNRPA1-205ENST00000558036 KRT85P78386 507 aa23.66■■□□□ 1.38
SNRPA1-205ENST00000558036 RRP1BQ14684 758 aaKnown RBP23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms