RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 AFG3L2Q9Y4W6 797 aa7.31□□□□□ -1.24
VPS33B-207ENST00000557470 RFX7Q2KHR2 1363 aa7.31□□□□□ -1.24
VPS33B-207ENST00000557470 ALPK3Q96L96 1907 aa7.31□□□□□ -1.24
VPS33B-207ENST00000557470 UNC80Q8N2C7 3258 aa7.3□□□□□ -1.24
VPS33B-207ENST00000557470 TRIM75PA6NK02 468 aa7.3□□□□□ -1.24
VPS33B-207ENST00000557470 PATL2C9JE40 543 aaKnown RBP7.3□□□□□ -1.24
VPS33B-207ENST00000557470 LDHBP07195 334 aaKnown RBP7.3□□□□□ -1.24
VPS33B-207ENST00000557470 SLC5A1P13866 664 aa7.3□□□□□ -1.24
VPS33B-207ENST00000557470 ZEB1P37275 1124 aaPredicted RBP7.3□□□□□ -1.24
VPS33B-207ENST00000557470 RFX5P48382 616 aaPredicted RBP7.3□□□□□ -1.24
VPS33B-207ENST00000557470 RGS3P49796 1198 aa7.3□□□□□ -1.24
VPS33B-207ENST00000557470 COPS2P61201 443 aa7.3□□□□□ -1.24
VPS33B-207ENST00000557470 HIC1Q14526 733 aa7.3□□□□□ -1.24
VPS33B-207ENST00000557470 Q7L0L9 218 aa7.3□□□□□ -1.24
VPS33B-207ENST00000557470 SH3BP5LQ7L8J4 393 aa7.3□□□□□ -1.24
VPS33B-207ENST00000557470 C7orf61Q8IZ16 206 aa7.3□□□□□ -1.24
VPS33B-207ENST00000557470 ANKRD13CQ8N6S4 541 aa7.3□□□□□ -1.24
VPS33B-207ENST00000557470 SMCR8Q8TEV9 937 aaPredicted RBP7.3□□□□□ -1.24
VPS33B-207ENST00000557470 LPIN2Q92539 896 aa7.3□□□□□ -1.24
VPS33B-207ENST00000557470 GDF15Q99988 308 aa7.3□□□□□ -1.24
VPS33B-207ENST00000557470 IL21Q9HBE4 155 aa7.3□□□□□ -1.24
VPS33B-207ENST00000557470 ZMYND8Q9ULU4 1186 aaPredicted RBP7.3□□□□□ -1.24
VPS33B-207ENST00000557470 SLC45A1Q9Y2W3 748 aa7.3□□□□□ -1.24
VPS33B-207ENST00000557470 AK9Q5TCS8 1911 aa7.3□□□□□ -1.24
VPS33B-207ENST00000557470 DOCK2Q92608 1830 aa7.29□□□□□ -1.24
VPS33B-207ENST00000557470 MYH13Q9UKX3 1938 aa7.29□□□□□ -1.24
VPS33B-207ENST00000557470 DDTLA6NHG4 134 aaPredicted RBP7.29□□□□□ -1.24
VPS33B-207ENST00000557470 EYA2O00167 538 aa7.29□□□□□ -1.24
VPS33B-207ENST00000557470 CAPN2P17655 700 aa7.29□□□□□ -1.24
VPS33B-207ENST00000557470 BMP8BP34820 402 aa7.29□□□□□ -1.24
VPS33B-207ENST00000557470 MAP3K10Q02779 954 aa7.29□□□□□ -1.24
VPS33B-207ENST00000557470 PDE4CQ08493 712 aa7.29□□□□□ -1.24
VPS33B-207ENST00000557470 TREML2Q5T2D2 321 aa7.29□□□□□ -1.24
VPS33B-207ENST00000557470 ATG9AQ7Z3C6 839 aa7.29□□□□□ -1.24
VPS33B-207ENST00000557470 NECAB2Q7Z6G3 386 aa7.29□□□□□ -1.24
VPS33B-207ENST00000557470 CCDC84Q86UT8 332 aaPredicted RBP7.29□□□□□ -1.24
VPS33B-207ENST00000557470 DEFB123Q8N688 67 aa7.29□□□□□ -1.24
VPS33B-207ENST00000557470 COA7Q96BR5 231 aa7.29□□□□□ -1.24
VPS33B-207ENST00000557470 IDI2Q9BXS1 227 aa7.29□□□□□ -1.24
VPS33B-207ENST00000557470 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.29□□□□□ -1.24
VPS33B-207ENST00000557470 USP44Q9H0E7 712 aa7.29□□□□□ -1.24
VPS33B-207ENST00000557470 MRS2Q9HD23 443 aa7.29□□□□□ -1.24
VPS33B-207ENST00000557470 DDX4Q9NQI0 724 aaKnown RBP7.29□□□□□ -1.24
VPS33B-207ENST00000557470 AGTPBP1Q9UPW5 1226 aa7.29□□□□□ -1.24
VPS33B-207ENST00000557470 LRRFIP2Q9Y608 721 aaKnown RBP7.29□□□□□ -1.24
VPS33B-207ENST00000557470 LAMA2P24043 3122 aaKnown RBP7.29□□□□□ -1.24
VPS33B-207ENST00000557470 PTPRFP10586 1907 aa7.29□□□□□ -1.24
VPS33B-207ENST00000557470 GAKO14976 1311 aa7.28□□□□□ -1.24
VPS33B-207ENST00000557470 SALL1Q9NSC2 1324 aa7.28□□□□□ -1.24
VPS33B-207ENST00000557470 CTNND1O60716 968 aaKnown RBP7.28□□□□□ -1.24
VPS33B-207ENST00000557470 ENTPD3O75355 529 aa7.28□□□□□ -1.24
VPS33B-207ENST00000557470 HMGCRP04035 888 aa7.28□□□□□ -1.24
VPS33B-207ENST00000557470 SYN1P17600 705 aa7.28□□□□□ -1.24
VPS33B-207ENST00000557470 MAGEA10P43363 369 aaPredicted RBP7.28□□□□□ -1.24
VPS33B-207ENST00000557470 PHKA1P46020 1223 aa7.28□□□□□ -1.24
VPS33B-207ENST00000557470 TRIM32Q13049 653 aa7.28□□□□□ -1.24
VPS33B-207ENST00000557470 MCM6Q14566 821 aa7.28□□□□□ -1.24
VPS33B-207ENST00000557470 ATP2B3Q16720 1220 aa7.28□□□□□ -1.24
VPS33B-207ENST00000557470 FAM110CQ1W6H9 321 aa7.28□□□□□ -1.24
VPS33B-207ENST00000557470 METTL3Q86U44 580 aaKnown RBP7.28□□□□□ -1.24
VPS33B-207ENST00000557470 ZSCAN29Q8IWY8 852 aaPredicted RBP7.28□□□□□ -1.24
VPS33B-207ENST00000557470 PCMTD1Q96MG8 357 aaPredicted RBP7.28□□□□□ -1.24
VPS33B-207ENST00000557470 GNL3LQ9NVN8 582 aaKnown RBP7.28□□□□□ -1.24
VPS33B-207ENST00000557470 PHIPQ8WWQ0 1821 aa7.28□□□□□ -1.24
VPS33B-207ENST00000557470 DOCK1Q14185 1865 aa7.28□□□□□ -1.24
VPS33B-207ENST00000557470 DOCK3Q8IZD9 2030 aa7.27□□□□□ -1.25
VPS33B-207ENST00000557470 FAM196BA6NMK8 535 aa7.27□□□□□ -1.25
VPS33B-207ENST00000557470 ADORA1P30542 326 aa7.27□□□□□ -1.25
VPS33B-207ENST00000557470 SLC4A3P48751 1232 aa7.27□□□□□ -1.25
VPS33B-207ENST00000557470 PICALMQ13492 652 aa7.27□□□□□ -1.25
VPS33B-207ENST00000557470 LRIT3Q3SXY7 679 aa7.27□□□□□ -1.25
VPS33B-207ENST00000557470 PPP1R18Q6NYC8 613 aa7.27□□□□□ -1.25
VPS33B-207ENST00000557470 DZIP1Q86YF9 867 aaKnown RBP7.27□□□□□ -1.25
VPS33B-207ENST00000557470 ANKLE1Q8NAG6 615 aa7.27□□□□□ -1.25
VPS33B-207ENST00000557470 NLRP7Q8WX94 980 aa7.27□□□□□ -1.25
VPS33B-207ENST00000557470 SIL1Q9H173 461 aa7.27□□□□□ -1.25
VPS33B-207ENST00000557470 C11orf49Q9H6J7 331 aa7.27□□□□□ -1.25
VPS33B-207ENST00000557470 DENND2AQ9ULE3 1009 aa7.27□□□□□ -1.25
VPS33B-207ENST00000557470 STXBP5LQ9Y2K9 1186 aa7.27□□□□□ -1.25
VPS33B-207ENST00000557470 DDX60LQ5H9U9 1706 aaKnown RBP7.27□□□□□ -1.25
VPS33B-207ENST00000557470 PTPRCP08575 1304 aa7.27□□□□□ -1.25
VPS33B-207ENST00000557470 RPTORQ8N122 1335 aa7.27□□□□□ -1.25
VPS33B-207ENST00000557470 CIAO1O76071 339 aa7.26□□□□□ -1.25
VPS33B-207ENST00000557470 OATP04181 439 aa7.26□□□□□ -1.25
VPS33B-207ENST00000557470 BTDP43251 543 aa7.26□□□□□ -1.25
VPS33B-207ENST00000557470 HMGCS2P54868 508 aa7.26□□□□□ -1.25
VPS33B-207ENST00000557470 SPP2Q13103 211 aa7.26□□□□□ -1.25
VPS33B-207ENST00000557470 RASGRF1Q13972 1273 aa7.26□□□□□ -1.25
VPS33B-207ENST00000557470 CCDC102BQ68D86 513 aa7.26□□□□□ -1.25
VPS33B-207ENST00000557470 BLOC1S3Q6QNY0 202 aa7.26□□□□□ -1.25
VPS33B-207ENST00000557470 TDHQ8IZJ6 230 aa7.26□□□□□ -1.25
VPS33B-207ENST00000557470 ZGPATQ8N5A5 531 aaKnown RBP7.26□□□□□ -1.25
VPS33B-207ENST00000557470 PROCA1Q8NCQ7 364 aaPredicted RBP7.26□□□□□ -1.25
VPS33B-207ENST00000557470 TRIB2Q92519 343 aa7.26□□□□□ -1.25
VPS33B-207ENST00000557470 HMX1Q9NP08 348 aaPredicted RBP7.26□□□□□ -1.25
VPS33B-207ENST00000557470 MTMR10Q9NXD2 777 aa7.26□□□□□ -1.25
VPS33B-207ENST00000557470 CEP126Q9P2H0 1117 aa7.26□□□□□ -1.25
VPS33B-207ENST00000557470 GJD2Q9UKL4 321 aa7.26□□□□□ -1.25
VPS33B-207ENST00000557470 OGDHLQ9ULD0 1010 aa7.26□□□□□ -1.25
VPS33B-207ENST00000557470 MYH2Q9UKX2 1941 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms