RNA–Protein interactions for RNA: ENST00000557431.5

SLIRP-210, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-210ENST00000557431 SOCS4Q8WXH5 440 aa17.2■□□□□ 0.34
SLIRP-210ENST00000557431 USP6NLQ92738 828 aa17.2■□□□□ 0.34
SLIRP-210ENST00000557431 ZNF512BQ96KM6 892 aaPredicted RBP17.2■□□□□ 0.34
SLIRP-210ENST00000557431 CWC22Q9HCG8 908 aaKnown RBP17.2■□□□□ 0.34
SLIRP-210ENST00000557431 FLRT1Q9NZU1 646 aa17.2■□□□□ 0.34
SLIRP-210ENST00000557431 EXOC6BQ9Y2D4 811 aa17.2■□□□□ 0.34
SLIRP-210ENST00000557431 MAPK4P31152 587 aa17.19■□□□□ 0.34
SLIRP-210ENST00000557431 PLEKHH3Q7Z736 793 aa17.19■□□□□ 0.34
SLIRP-210ENST00000557431 FTSJ3Q8IY81 847 aaKnown RBP17.19■□□□□ 0.34
SLIRP-210ENST00000557431 NOP58Q9Y2X3 529 aaKnown RBP17.19■□□□□ 0.34
SLIRP-210ENST00000557431 RGS2P41220 211 aa17.18■□□□□ 0.34
SLIRP-210ENST00000557431 PLCD1P51178 756 aa17.18■□□□□ 0.34
SLIRP-210ENST00000557431 LRRC26Q2I0M4 334 aa17.18■□□□□ 0.34
SLIRP-210ENST00000557431 TATDN1Q6P1N9 297 aa17.18■□□□□ 0.34
SLIRP-210ENST00000557431 AACSQ86V21 672 aa17.18■□□□□ 0.34
SLIRP-210ENST00000557431 SLC17A8Q8NDX2 589 aa17.18■□□□□ 0.34
SLIRP-210ENST00000557431 APBA2Q99767 749 aa17.18■□□□□ 0.34
SLIRP-210ENST00000557431 IL1RAPL2Q9NP60 686 aa17.18■□□□□ 0.34
SLIRP-210ENST00000557431 BTBD7Q9P203 1132 aa17.18■□□□□ 0.34
SLIRP-210ENST00000557431 COL6A3P12111 3177 aa17.18■□□□□ 0.34
SLIRP-210ENST00000557431 XRCC5P13010 732 aaKnown RBP17.17■□□□□ 0.34
SLIRP-210ENST00000557431 CAPN2P17655 700 aa17.17■□□□□ 0.34
SLIRP-210ENST00000557431 VCAM1P19320 739 aa17.17■□□□□ 0.34
SLIRP-210ENST00000557431 SHMT1P34896 483 aa17.17■□□□□ 0.34
SLIRP-210ENST00000557431 MDM2Q00987 491 aaPredicted RBP17.17■□□□□ 0.34
SLIRP-210ENST00000557431 MAP2K5Q13163 448 aa17.17■□□□□ 0.34
SLIRP-210ENST00000557431 LHX8Q68G74 356 aa17.17■□□□□ 0.34
SLIRP-210ENST00000557431 CEP85Q6P2H3 762 aa17.17■□□□□ 0.34
SLIRP-210ENST00000557431 GINM1Q9NU53 330 aa17.17■□□□□ 0.34
SLIRP-210ENST00000557431 SERPINB13Q9UIV8 391 aa17.17■□□□□ 0.34
SLIRP-210ENST00000557431 ZNF236Q9UL36 1845 aa17.17■□□□□ 0.34
SLIRP-210ENST00000557431 USP17L15C9J2P7 530 aa17.16■□□□□ 0.34
SLIRP-210ENST00000557431 USP17L13C9JLJ4 530 aa17.16■□□□□ 0.34
SLIRP-210ENST00000557431 USP17L11C9JVI0 530 aa17.16■□□□□ 0.34
SLIRP-210ENST00000557431 USP17L18D6R9N7 530 aa17.16■□□□□ 0.34
SLIRP-210ENST00000557431 USP17L22D6RA61 530 aa17.16■□□□□ 0.34
SLIRP-210ENST00000557431 USP17L17D6RBQ6 530 aa17.16■□□□□ 0.34
SLIRP-210ENST00000557431 USP17L19D6RCP7 530 aa17.16■□□□□ 0.34
SLIRP-210ENST00000557431 USP17L20D6RJB6 530 aa17.16■□□□□ 0.34
SLIRP-210ENST00000557431 APBB1O00213 710 aa17.16■□□□□ 0.34
SLIRP-210ENST00000557431 GUCY1A2P33402 732 aa17.16■□□□□ 0.34
SLIRP-210ENST00000557431 BMP8BP34820 402 aa17.16■□□□□ 0.34
SLIRP-210ENST00000557431 HNRNPUQ00839 825 aaKnown RBP eCLIP17.16■□□□□ 0.34
SLIRP-210ENST00000557431 USP17L24Q0WX57 530 aa17.16■□□□□ 0.34
SLIRP-210ENST00000557431 ABCB5Q2M3G0 1257 aa17.16■□□□□ 0.34
SLIRP-210ENST00000557431 CERKLQ49MI3 558 aaPredicted RBP17.16■□□□□ 0.34
SLIRP-210ENST00000557431 NPLOC4Q8TAT6 608 aa17.16■□□□□ 0.34
SLIRP-210ENST00000557431 C12orf42Q96LP6 360 aa17.16■□□□□ 0.34
SLIRP-210ENST00000557431 CYP2D6P10635 497 aa17.15■□□□□ 0.34
SLIRP-210ENST00000557431 COL6A1P12109 1028 aa17.15■□□□□ 0.34
SLIRP-210ENST00000557431 SEPT2Q15019 361 aa17.15■□□□□ 0.34
SLIRP-210ENST00000557431 SLFNL1Q499Z3 407 aa17.15■□□□□ 0.34
SLIRP-210ENST00000557431 CATSPERGQ6ZRH7 1159 aa17.15■□□□□ 0.34
SLIRP-210ENST00000557431 CLEC10AQ8IUN9 316 aa17.15■□□□□ 0.34
SLIRP-210ENST00000557431 SLC44A5Q8NCS7 719 aa17.15■□□□□ 0.34
SLIRP-210ENST00000557431 PANK1Q8TE04 598 aa17.15■□□□□ 0.34
SLIRP-210ENST00000557431 EDC3Q96F86 508 aaKnown RBP17.15■□□□□ 0.34
SLIRP-210ENST00000557431 RIOK1Q9BRS2 568 aaKnown RBP17.15■□□□□ 0.34
SLIRP-210ENST00000557431 UBE2OQ9C0C9 1292 aaKnown RBP17.15■□□□□ 0.34
SLIRP-210ENST00000557431 RPAP3Q9H6T3 665 aaPredicted RBP17.15■□□□□ 0.34
SLIRP-210ENST00000557431 RABGAP1Q9Y3P9 1069 aa17.15■□□□□ 0.34
SLIRP-210ENST00000557431 MCM3APO60318 1980 aa17.15■□□□□ 0.34
SLIRP-210ENST00000557431 MYH4Q9Y623 1939 aa17.14■□□□□ 0.33
SLIRP-210ENST00000557431 SPDYE16A6NNV3 312 aaPredicted RBP17.14■□□□□ 0.33
SLIRP-210ENST00000557431 SMIM22K7EJ46 135 aa17.14■□□□□ 0.33
SLIRP-210ENST00000557431 DLL1O00548 723 aa17.14■□□□□ 0.33
SLIRP-210ENST00000557431 CNGA1P29973 690 aa17.14■□□□□ 0.33
SLIRP-210ENST00000557431 CYP2C19P33261 490 aa17.14■□□□□ 0.33
SLIRP-210ENST00000557431 ANO1Q5XXA6 986 aa17.14■□□□□ 0.33
SLIRP-210ENST00000557431 TDHQ8IZJ6 230 aa17.14■□□□□ 0.33
SLIRP-210ENST00000557431 DEFB123Q8N688 67 aa17.14■□□□□ 0.33
SLIRP-210ENST00000557431 SDR42E1Q8WUS8 393 aa17.14■□□□□ 0.33
SLIRP-210ENST00000557431 EHD4Q9H223 541 aa17.14■□□□□ 0.33
SLIRP-210ENST00000557431 A0A1W2PRG0 241 aa17.13■□□□□ 0.33
SLIRP-210ENST00000557431 MPHOSPH10O00566 681 aaKnown RBP17.13■□□□□ 0.33
SLIRP-210ENST00000557431 POLR3DP05423 398 aaPredicted RBP17.13■□□□□ 0.33
SLIRP-210ENST00000557431 PTPREP23469 700 aa17.13■□□□□ 0.33
SLIRP-210ENST00000557431 ATN1P54259 1190 aaPredicted RBP17.13■□□□□ 0.33
SLIRP-210ENST00000557431 MAP3K12Q12852 859 aa17.13■□□□□ 0.33
SLIRP-210ENST00000557431 KIAA1755Q5JYT7 1200 aa17.13■□□□□ 0.33
SLIRP-210ENST00000557431 TTC6Q86TZ1 520 aa17.13■□□□□ 0.33
SLIRP-210ENST00000557431 TRMT44Q8IYL2 757 aaKnown RBP17.13■□□□□ 0.33
SLIRP-210ENST00000557431 TRPV1Q8NER1 839 aa17.13■□□□□ 0.33
SLIRP-210ENST00000557431 GTF3C2Q8WUA4 911 aaPredicted RBP17.13■□□□□ 0.33
SLIRP-210ENST00000557431 SENP6Q9GZR1 1112 aaPredicted RBP17.13■□□□□ 0.33
SLIRP-210ENST00000557431 KIAA1683Q9H0B3 1180 aa17.13■□□□□ 0.33
SLIRP-210ENST00000557431 CABP5Q9NP86 173 aa17.13■□□□□ 0.33
SLIRP-210ENST00000557431 MAGEB6P1A0A0J9YX57 407 aa17.12■□□□□ 0.33
SLIRP-210ENST00000557431 USP14P54578 494 aa17.12■□□□□ 0.33
SLIRP-210ENST00000557431 SAMD1Q6SPF0 538 aaPredicted RBP17.12■□□□□ 0.33
SLIRP-210ENST00000557431 LCORLQ8N3X6 602 aa17.12■□□□□ 0.33
SLIRP-210ENST00000557431 DNAJC2Q99543 621 aaKnown RBP17.12■□□□□ 0.33
SLIRP-210ENST00000557431 CHGBP05060 677 aa17.11■□□□□ 0.33
SLIRP-210ENST00000557431 PDE6AP16499 860 aa17.11■□□□□ 0.33
SLIRP-210ENST00000557431 CCNA1P78396 465 aa17.11■□□□□ 0.33
SLIRP-210ENST00000557431 GABPAQ06546 454 aa17.11■□□□□ 0.33
SLIRP-210ENST00000557431 MFSD14CQ5VZR4 134 aa17.11■□□□□ 0.33
SLIRP-210ENST00000557431 DYNLL2Q96FJ2 89 aa17.11■□□□□ 0.33
SLIRP-210ENST00000557431 MCM9Q9NXL9 1143 aa17.11■□□□□ 0.33
SLIRP-210ENST00000557431 ZNF532Q9HCE3 1301 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms