RNA–Protein interactions for RNA: ENST00000557344.5

APEX1-218, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 2

Gene APEX1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-218ENST00000557344 DNAJC18Q9H819 358 aa12.39□□□□□ -0.43
APEX1-218ENST00000557344 EMILIN3Q9NT22 766 aa12.39□□□□□ -0.43
APEX1-218ENST00000557344 HMG20BQ9P0W2 317 aa12.39□□□□□ -0.43
APEX1-218ENST00000557344 AKAP2Q9Y2D5 859 aa12.39□□□□□ -0.43
APEX1-218ENST00000557344 ATP11BQ9Y2G3 1177 aa12.39□□□□□ -0.43
APEX1-218ENST00000557344 NDUFB9Q9Y6M9 179 aa12.39□□□□□ -0.43
APEX1-218ENST00000557344 PTPREP23469 700 aa12.38□□□□□ -0.43
APEX1-218ENST00000557344 CCNA1P78396 465 aa12.38□□□□□ -0.43
APEX1-218ENST00000557344 ATP2B2Q01814 1243 aa12.38□□□□□ -0.43
APEX1-218ENST00000557344 TJAP1Q5JTD0 557 aa12.38□□□□□ -0.43
APEX1-218ENST00000557344 GJC2Q5T442 439 aaPredicted RBP12.38□□□□□ -0.43
APEX1-218ENST00000557344 USP17L2Q6R6M4 530 aa12.38□□□□□ -0.43
APEX1-218ENST00000557344 PI16Q6UXB8 463 aa12.38□□□□□ -0.43
APEX1-218ENST00000557344 FOXP4Q8IVH2 680 aaPredicted RBP12.38□□□□□ -0.43
APEX1-218ENST00000557344 TRPV1Q8NER1 839 aa12.38□□□□□ -0.43
APEX1-218ENST00000557344 NPLOC4Q8TAT6 608 aa12.38□□□□□ -0.43
APEX1-218ENST00000557344 SH3RF3Q8TEJ3 882 aaPredicted RBP12.38□□□□□ -0.43
APEX1-218ENST00000557344 CWC22Q9HCG8 908 aaKnown RBP12.38□□□□□ -0.43
APEX1-218ENST00000557344 ZBTB21Q9ULJ3 1066 aa12.38□□□□□ -0.43
APEX1-218ENST00000557344 MYO5AQ9Y4I1 1855 aaKnown RBP12.38□□□□□ -0.43
APEX1-218ENST00000557344 TMEM265A0A087WTH1 108 aa12.37□□□□□ -0.43
APEX1-218ENST00000557344 TNFRSF10AO00220 468 aa12.37□□□□□ -0.43
APEX1-218ENST00000557344 GDF11O95390 407 aa12.37□□□□□ -0.43
APEX1-218ENST00000557344 CYP2C19P33261 490 aa12.37□□□□□ -0.43
APEX1-218ENST00000557344 G3BP1Q13283 466 aaKnown RBP eCLIP12.37□□□□□ -0.432e-8■■■□□ 15.5
APEX1-218ENST00000557344 SNX17Q15036 470 aa12.37□□□□□ -0.43
APEX1-218ENST00000557344 SPATA5Q8NB90 893 aa12.37□□□□□ -0.43
APEX1-218ENST00000557344 ARRDC4Q8NCT1 418 aa12.37□□□□□ -0.43
APEX1-218ENST00000557344 PRDM5Q9NQX1 630 aaPredicted RBP12.37□□□□□ -0.43
APEX1-218ENST00000557344 RAI14Q9P0K7 980 aa12.37□□□□□ -0.43
APEX1-218ENST00000557344 NOP58Q9Y2X3 529 aaKnown RBP12.37□□□□□ -0.43
APEX1-218ENST00000557344 SIPA1L1O43166 1804 aa12.37□□□□□ -0.43
APEX1-218ENST00000557344 TRIM43BA6NCK2 446 aa12.36□□□□□ -0.43
APEX1-218ENST00000557344 USP17L15C9J2P7 530 aa12.36□□□□□ -0.43
APEX1-218ENST00000557344 USP17L13C9JLJ4 530 aa12.36□□□□□ -0.43
APEX1-218ENST00000557344 USP17L11C9JVI0 530 aa12.36□□□□□ -0.43
APEX1-218ENST00000557344 USP17L18D6R9N7 530 aa12.36□□□□□ -0.43
APEX1-218ENST00000557344 USP17L22D6RA61 530 aa12.36□□□□□ -0.43
APEX1-218ENST00000557344 USP17L17D6RBQ6 530 aa12.36□□□□□ -0.43
APEX1-218ENST00000557344 USP17L19D6RCP7 530 aa12.36□□□□□ -0.43
APEX1-218ENST00000557344 USP17L20D6RJB6 530 aa12.36□□□□□ -0.43
APEX1-218ENST00000557344 CYBAP13498 195 aa12.36□□□□□ -0.43
APEX1-218ENST00000557344 USP17L24Q0WX57 530 aa12.36□□□□□ -0.43
APEX1-218ENST00000557344 GRB14Q14449 540 aa12.36□□□□□ -0.43
APEX1-218ENST00000557344 TRIM60Q495X7 471 aa12.36□□□□□ -0.43
APEX1-218ENST00000557344 WDR78Q5VTH9 848 aa12.36□□□□□ -0.43
APEX1-218ENST00000557344 CEP85Q6P2H3 762 aa12.36□□□□□ -0.43
APEX1-218ENST00000557344 SH3RF1Q7Z6J0 888 aa12.36□□□□□ -0.43
APEX1-218ENST00000557344 CRACR2BQ8N4Y2 399 aaPredicted RBP12.36□□□□□ -0.43
APEX1-218ENST00000557344 TRIM43Q96BQ3 446 aaPredicted RBP12.36□□□□□ -0.43
APEX1-218ENST00000557344 C12orf42Q96LP6 360 aa12.36□□□□□ -0.43
APEX1-218ENST00000557344 NEUROD6Q96NK8 337 aa12.36□□□□□ -0.43
APEX1-218ENST00000557344 GPR108Q9NPR9 543 aa12.36□□□□□ -0.43
APEX1-218ENST00000557344 PDLIM7Q9NR12 457 aa12.36□□□□□ -0.43
APEX1-218ENST00000557344 RCAN3Q9UKA8 241 aa12.36□□□□□ -0.43
APEX1-218ENST00000557344 RLFQ13129 1914 aa12.36□□□□□ -0.43
APEX1-218ENST00000557344 CDH23Q9H251 3354 aa12.36□□□□□ -0.43
APEX1-218ENST00000557344 KBTBD13C9JR72 458 aa12.35□□□□□ -0.43
APEX1-218ENST00000557344 SURF6O75683 361 aaKnown RBP12.35□□□□□ -0.43
APEX1-218ENST00000557344 ARID4AP29374 1257 aaPredicted RBP12.35□□□□□ -0.43
APEX1-218ENST00000557344 PPP4CP60510 307 aa12.35□□□□□ -0.43
APEX1-218ENST00000557344 C1orf53Q5VUE5 145 aa12.35□□□□□ -0.43
APEX1-218ENST00000557344 LBX2Q6XYB7 198 aa12.35□□□□□ -0.43
APEX1-218ENST00000557344 USP38Q8NB14 1042 aa12.35□□□□□ -0.43
APEX1-218ENST00000557344 TGFBRAP1Q8WUH2 860 aa12.35□□□□□ -0.43
APEX1-218ENST00000557344 NOL10Q9BSC4 688 aaKnown RBP12.35□□□□□ -0.43
APEX1-218ENST00000557344 AATFQ9NY61 560 aaKnown RBP eCLIP12.35□□□□□ -0.43
APEX1-218ENST00000557344 BTBD7Q9P203 1132 aa12.35□□□□□ -0.43
APEX1-218ENST00000557344 LRP2BPQ9P2M1 347 aa12.35□□□□□ -0.43
APEX1-218ENST00000557344 PALD1Q9ULE6 856 aa12.35□□□□□ -0.43
APEX1-218ENST00000557344 IVNS1ABPQ9Y6Y0 642 aa12.35□□□□□ -0.43
APEX1-218ENST00000557344 FLT1P17948 1338 aa12.35□□□□□ -0.43
APEX1-218ENST00000557344 BAG3O95817 575 aa12.34□□□□□ -0.43
APEX1-218ENST00000557344 MS4A1P11836 297 aa12.34□□□□□ -0.43
APEX1-218ENST00000557344 PLCG2P16885 1265 aa12.34□□□□□ -0.43
APEX1-218ENST00000557344 ITGB8P26012 769 aa12.34□□□□□ -0.43
APEX1-218ENST00000557344 GRIN2CQ14957 1233 aa12.34□□□□□ -0.43
APEX1-218ENST00000557344 TNNI3KQ59H18 835 aa12.34□□□□□ -0.43
APEX1-218ENST00000557344 CATSPERGQ6ZRH7 1159 aa12.34□□□□□ -0.43
APEX1-218ENST00000557344 MAPKAPK5Q8IW41 473 aa12.34□□□□□ -0.43
APEX1-218ENST00000557344 RNPC3Q96LT9 517 aaKnown RBP12.34□□□□□ -0.43
APEX1-218ENST00000557344 TRIM34Q9BYJ4 488 aa12.34□□□□□ -0.43
APEX1-218ENST00000557344 RAPGEFL1Q9UHV5 662 aa12.34□□□□□ -0.43
APEX1-218ENST00000557344 FPGT-TNNI3KV9GXZ4 949 aa12.34□□□□□ -0.43
APEX1-218ENST00000557344 MUC3AQ02505 3323 aa12.34□□□□□ -0.43
APEX1-218ENST00000557344 SEPT4O43236 478 aa12.33□□□□□ -0.44
APEX1-218ENST00000557344 GH2P01242 217 aa12.33□□□□□ -0.44
APEX1-218ENST00000557344 ADCYAP1R1P41586 468 aa12.33□□□□□ -0.44
APEX1-218ENST00000557344 MCAMP43121 646 aa12.33□□□□□ -0.44
APEX1-218ENST00000557344 EPHB4P54760 987 aa12.33□□□□□ -0.44
APEX1-218ENST00000557344 ZYXQ15942 572 aaKnown RBP12.33□□□□□ -0.44
APEX1-218ENST00000557344 GORABQ5T7V8 394 aa12.33□□□□□ -0.44
APEX1-218ENST00000557344 ANO1Q5XXA6 986 aa12.33□□□□□ -0.44
APEX1-218ENST00000557344 OLFML2BQ68BL8 750 aa12.33□□□□□ -0.44
APEX1-218ENST00000557344 ZBTB40Q9NUA8 1239 aa12.33□□□□□ -0.44
APEX1-218ENST00000557344 COG6Q9Y2V7 657 aa12.33□□□□□ -0.44
APEX1-218ENST00000557344 TACC3Q9Y6A5 838 aa12.33□□□□□ -0.44
APEX1-218ENST00000557344 CDK5RAP2Q96SN8 1893 aa12.33□□□□□ -0.44
APEX1-218ENST00000557344 VCAM1P19320 739 aa12.32□□□□□ -0.44
APEX1-218ENST00000557344 DNAJB2P25686 324 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms