RNA–Protein interactions for RNA: ENST00000557041.1

TMEM55B-207, humanhuman

TSL 2

Gene TMEM55B, Length 3,453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-207ENST00000557041 MTERF4Q7Z6M4 381 aaKnown RBP17.44■□□□□ 0.38
TMEM55B-207ENST00000557041 ZNF512BQ96KM6 892 aaPredicted RBP17.44■□□□□ 0.38
TMEM55B-207ENST00000557041 SPTLC3Q9NUV7 552 aa17.44■□□□□ 0.38
TMEM55B-207ENST00000557041 ELF2Q15723 593 aa17.44■□□□□ 0.38
TMEM55B-207ENST00000557041 INF2Q27J81 1249 aa17.44■□□□□ 0.38
TMEM55B-207ENST00000557041 RESP18Q5W5W9 173 aa17.44■□□□□ 0.38
TMEM55B-207ENST00000557041 FOXP4Q8IVH2 680 aaPredicted RBP17.44■□□□□ 0.38
TMEM55B-207ENST00000557041 NSUN4Q96CB9 384 aaKnown RBP17.44■□□□□ 0.38
TMEM55B-207ENST00000557041 PAXBP1Q9Y5B6 917 aa17.44■□□□□ 0.38
TMEM55B-207ENST00000557041 KCPQ6ZWJ8 1503 aa17.44■□□□□ 0.38
TMEM55B-207ENST00000557041 GTF2IP78347 998 aa17.44■□□□□ 0.38
TMEM55B-207ENST00000557041 TSR1Q2NL82 804 aaKnown RBP17.44■□□□□ 0.38
TMEM55B-207ENST00000557041 MFSD14BQ5SR56 506 aa17.44■□□□□ 0.38
TMEM55B-207ENST00000557041 JAKMIP3Q5VZ66 844 aa17.44■□□□□ 0.38
TMEM55B-207ENST00000557041 STAG2Q8N3U4 1231 aa17.44■□□□□ 0.38
TMEM55B-207ENST00000557041 SEC63Q9UGP8 760 aaKnown RBP17.44■□□□□ 0.38
TMEM55B-207ENST00000557041 TRPM3Q9HCF6 1732 aaPredicted RBP17.43■□□□□ 0.38
TMEM55B-207ENST00000557041 PTPAQ15257 358 aa17.43■□□□□ 0.38
TMEM55B-207ENST00000557041 CLEC4GQ6UXB4 293 aa17.43■□□□□ 0.38
TMEM55B-207ENST00000557041 ZNF804AQ7Z570 1209 aa17.43■□□□□ 0.38
TMEM55B-207ENST00000557041 NUP88Q99567 741 aaPredicted RBP17.43■□□□□ 0.38
TMEM55B-207ENST00000557041 FOXP1Q9H334 677 aaPredicted RBP17.43■□□□□ 0.38
TMEM55B-207ENST00000557041 IDEP14735 1019 aa17.43■□□□□ 0.38
TMEM55B-207ENST00000557041 TERF1P54274 439 aa17.43■□□□□ 0.38
TMEM55B-207ENST00000557041 RASGRP2Q7LDG7 609 aa17.43■□□□□ 0.38
TMEM55B-207ENST00000557041 SRBD1Q8N5C6 995 aaKnown RBP17.43■□□□□ 0.38
TMEM55B-207ENST00000557041 ZNF622Q969S3 477 aaKnown RBP eCLIP17.43■□□□□ 0.38
TMEM55B-207ENST00000557041 TRIM34Q9BYJ4 488 aa17.43■□□□□ 0.38
TMEM55B-207ENST00000557041 SCG2P13521 617 aa17.42■□□□□ 0.38
TMEM55B-207ENST00000557041 SCNN1DP51172 638 aa17.42■□□□□ 0.38
TMEM55B-207ENST00000557041 CCDC96Q2M329 555 aa17.42■□□□□ 0.38
TMEM55B-207ENST00000557041 TEX35Q5T0J7 233 aa17.42■□□□□ 0.38
TMEM55B-207ENST00000557041 ARMCX5Q6P1M9 558 aa17.42■□□□□ 0.38
TMEM55B-207ENST00000557041 RNF26Q9BY78 433 aaPredicted RBP17.42■□□□□ 0.38
TMEM55B-207ENST00000557041 GPCPD1Q9NPB8 672 aa17.42■□□□□ 0.38
TMEM55B-207ENST00000557041 CALM1P0DP23 149 aa17.42■□□□□ 0.38
TMEM55B-207ENST00000557041 CALM2P0DP24 149 aa17.42■□□□□ 0.38
TMEM55B-207ENST00000557041 CALM3P0DP25 149 aa17.42■□□□□ 0.38
TMEM55B-207ENST00000557041 PTPREP23469 700 aa17.42■□□□□ 0.38
TMEM55B-207ENST00000557041 CCDC178Q5BJE1 867 aa17.42■□□□□ 0.38
TMEM55B-207ENST00000557041 UBXN4Q92575 508 aa17.42■□□□□ 0.38
TMEM55B-207ENST00000557041 CDK5RAP3Q96JB5 506 aa17.42■□□□□ 0.38
TMEM55B-207ENST00000557041 TNS2Q63HR2 1409 aa17.42■□□□□ 0.38
TMEM55B-207ENST00000557041 DOK7Q18PE1 504 aa17.42■□□□□ 0.38
TMEM55B-207ENST00000557041 USP17L2Q6R6M4 530 aa17.42■□□□□ 0.38
TMEM55B-207ENST00000557041 NARFQ9UHQ1 456 aa17.42■□□□□ 0.38
TMEM55B-207ENST00000557041 SPATA31A5Q5VU36 1347 aa17.42■□□□□ 0.38
TMEM55B-207ENST00000557041 SPATA31A7Q8IWB4 1347 aa17.42■□□□□ 0.38
TMEM55B-207ENST00000557041 FMR1Q06787 632 aaKnown RBP eCLIP17.41■□□□□ 0.38
TMEM55B-207ENST00000557041 BAG1Q99933 345 aaPredicted RBP17.41■□□□□ 0.38
TMEM55B-207ENST00000557041 RBM28Q9NW13 759 aaKnown RBP17.41■□□□□ 0.38
TMEM55B-207ENST00000557041 THRAP3Q9Y2W1 955 aaKnown RBP17.41■□□□□ 0.38
TMEM55B-207ENST00000557041 FRMPD2Q68DX3 1309 aaPredicted RBP17.41■□□□□ 0.38
TMEM55B-207ENST00000557041 PP2D1A8MPX8 630 aa17.41■□□□□ 0.38
TMEM55B-207ENST00000557041 LDHCP07864 332 aa17.41■□□□□ 0.38
TMEM55B-207ENST00000557041 KANK3Q6NY19 840 aa17.41■□□□□ 0.38
TMEM55B-207ENST00000557041 IQUBQ8NA54 791 aa17.41■□□□□ 0.38
TMEM55B-207ENST00000557041 RIOK1Q9BRS2 568 aaKnown RBP17.41■□□□□ 0.38
TMEM55B-207ENST00000557041 RNF216Q9NWF9 866 aaPredicted RBP17.41■□□□□ 0.38
TMEM55B-207ENST00000557041 RPS6KA4O75676 772 aa17.41■□□□□ 0.38
TMEM55B-207ENST00000557041 TCP10Q12799 353 aa17.41■□□□□ 0.38
TMEM55B-207ENST00000557041 MSL1Q68DK7 614 aa17.41■□□□□ 0.38
TMEM55B-207ENST00000557041 SARM1Q6SZW1 724 aa17.41■□□□□ 0.38
TMEM55B-207ENST00000557041 BTDP43251 543 aa17.4■□□□□ 0.38
TMEM55B-207ENST00000557041 PNPLA7Q6ZV29 1317 aa17.4■□□□□ 0.38
TMEM55B-207ENST00000557041 MAP3K14Q99558 947 aa17.4■□□□□ 0.38
TMEM55B-207ENST00000557041 ZMYND15Q9H091 742 aa17.4■□□□□ 0.38
TMEM55B-207ENST00000557041 TAB2Q9NYJ8 693 aa17.4■□□□□ 0.38
TMEM55B-207ENST00000557041 TRIM37O94972 964 aa17.4■□□□□ 0.38
TMEM55B-207ENST00000557041 ST5P78524 1137 aa17.4■□□□□ 0.38
TMEM55B-207ENST00000557041 ERCC6LQ2NKX8 1250 aa17.4■□□□□ 0.38
TMEM55B-207ENST00000557041 DTHD1Q6ZMT9 781 aa17.4■□□□□ 0.38
TMEM55B-207ENST00000557041 ZNF771Q7L3S4 317 aaPredicted RBP17.4■□□□□ 0.38
TMEM55B-207ENST00000557041 NBPF11Q86T75 865 aa17.4■□□□□ 0.38
TMEM55B-207ENST00000557041 CLEC10AQ8IUN9 316 aa17.4■□□□□ 0.38
TMEM55B-207ENST00000557041 LRRC47Q8N1G4 583 aaKnown RBP17.4■□□□□ 0.38
TMEM55B-207ENST00000557041 ARHGAP29Q52LW3 1261 aa17.4■□□□□ 0.38
TMEM55B-207ENST00000557041 IGSF22Q8N9C0 903 aa17.4■□□□□ 0.38
TMEM55B-207ENST00000557041 CCDC12Q8WUD4 166 aaPredicted RBP17.4■□□□□ 0.38
TMEM55B-207ENST00000557041 GGA1Q9UJY5 639 aa17.4■□□□□ 0.38
TMEM55B-207ENST00000557041 FBXO2Q9UK22 296 aaPredicted RBP17.4■□□□□ 0.38
TMEM55B-207ENST00000557041 WDR19Q8NEZ3 1342 aa17.39■□□□□ 0.37
TMEM55B-207ENST00000557041 WDR66Q8TBY9 1149 aa17.39■□□□□ 0.37
TMEM55B-207ENST00000557041 ZHX1Q9UKY1 873 aaPredicted RBP17.39■□□□□ 0.37
TMEM55B-207ENST00000557041 ARFGEF2Q9Y6D5 1785 aa17.39■□□□□ 0.37
TMEM55B-207ENST00000557041 ALS2Q96Q42 1657 aa17.39■□□□□ 0.37
TMEM55B-207ENST00000557041 CCZ1BP86790 482 aa17.39■□□□□ 0.37
TMEM55B-207ENST00000557041 CCZ1P86791 482 aaPredicted RBP17.39■□□□□ 0.37
TMEM55B-207ENST00000557041 SF3B3Q15393 1217 aaKnown RBP17.39■□□□□ 0.37
TMEM55B-207ENST00000557041 ENOX2Q16206 610 aaKnown RBP17.39■□□□□ 0.37
TMEM55B-207ENST00000557041 GRIK5Q16478 980 aa17.39■□□□□ 0.37
TMEM55B-207ENST00000557041 TRMT1LQ7Z2T5 733 aaKnown RBP17.39■□□□□ 0.37
TMEM55B-207ENST00000557041 TICAM2Q86XR7 235 aa17.39■□□□□ 0.37
TMEM55B-207ENST00000557041 MLKLQ8NB16 471 aa17.39■□□□□ 0.37
TMEM55B-207ENST00000557041 EYA3Q99504 573 aa17.39■□□□□ 0.37
TMEM55B-207ENST00000557041 MAGEC2Q9UBF1 373 aaPredicted RBP17.39■□□□□ 0.37
TMEM55B-207ENST00000557041 SRPRBQ9Y5M8 271 aaKnown RBP17.39■□□□□ 0.37
TMEM55B-207ENST00000557041 KLRF2D3W0D1 207 aa17.38■□□□□ 0.37
TMEM55B-207ENST00000557041 CCNT1O60563 726 aaKnown RBP17.38■□□□□ 0.37
TMEM55B-207ENST00000557041 PPP1R13BQ96KQ4 1090 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms