RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 ABCC1P33527 1531 aa6.09□□□□□ -1.43
SRP54-212ENST00000556992 FAM135AQ9P2D6 1515 aa6.09□□□□□ -1.43
SRP54-212ENST00000556992 PLA2R1Q13018 1463 aa6.09□□□□□ -1.43
SRP54-212ENST00000556992 ZNF518AQ6AHZ1 1483 aa6.09□□□□□ -1.43
SRP54-212ENST00000556992 MLH3Q9UHC1 1453 aa6.09□□□□□ -1.43
SRP54-212ENST00000556992 WASHC2CQ9Y4E1 1318 aa6.09□□□□□ -1.43
SRP54-212ENST00000556992 TMEM265A0A087WTH1 108 aa6.09□□□□□ -1.43
SRP54-212ENST00000556992 FYB2Q5VWT5 728 aa6.09□□□□□ -1.43
SRP54-212ENST00000556992 GGT6Q6P531 493 aa6.09□□□□□ -1.43
SRP54-212ENST00000556992 LIN37Q96GY3 246 aaPredicted RBP6.09□□□□□ -1.43
SRP54-212ENST00000556992 SLC38A3Q99624 504 aa6.09□□□□□ -1.43
SRP54-212ENST00000556992 KRT82Q9NSB4 513 aa6.09□□□□□ -1.43
SRP54-212ENST00000556992 TEX14Q8IWB6 1497 aa6.09□□□□□ -1.44
SRP54-212ENST00000556992 SPATA31E1Q6ZUB1 1445 aa6.08□□□□□ -1.44
SRP54-212ENST00000556992 PPRC1Q5VV67 1664 aaKnown RBP6.08□□□□□ -1.44
SRP54-212ENST00000556992 ABCA9Q8IUA7 1624 aa6.08□□□□□ -1.44
SRP54-212ENST00000556992 ZP2Q05996 745 aa6.08□□□□□ -1.44
SRP54-212ENST00000556992 PDE3BQ13370 1112 aa6.08□□□□□ -1.44
SRP54-212ENST00000556992 KCNMB1Q16558 191 aa6.08□□□□□ -1.44
SRP54-212ENST00000556992 PPM1JQ5JR12 505 aa6.08□□□□□ -1.44
SRP54-212ENST00000556992 SLC23A3Q6PIS1 610 aa6.08□□□□□ -1.44
SRP54-212ENST00000556992 FAM214BQ7L5A3 538 aa6.08□□□□□ -1.44
SRP54-212ENST00000556992 ZSWIM9Q86XI8 627 aa6.08□□□□□ -1.44
SRP54-212ENST00000556992 GPBAR1Q8TDU6 330 aa6.08□□□□□ -1.44
SRP54-212ENST00000556992 TMEM39AQ9NV64 488 aa6.08□□□□□ -1.44
SRP54-212ENST00000556992 TRAK1Q9UPV9 953 aa6.08□□□□□ -1.44
SRP54-212ENST00000556992 PTPRTO14522 1441 aa6.08□□□□□ -1.44
SRP54-212ENST00000556992 POGZQ7Z3K3 1410 aa6.08□□□□□ -1.44
SRP54-212ENST00000556992 CCDC7Q96M83 1385 aa6.07□□□□□ -1.44
SRP54-212ENST00000556992 DISP3Q9P2K9 1392 aa6.07□□□□□ -1.44
SRP54-212ENST00000556992 PLXNC1O60486 1568 aa6.07□□□□□ -1.44
SRP54-212ENST00000556992 ST20-MTHFSA0A0A6YYL1 179 aa6.07□□□□□ -1.44
SRP54-212ENST00000556992 DCDC2CA8MYV0 355 aa6.07□□□□□ -1.44
SRP54-212ENST00000556992 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.07□□□□□ -1.44
SRP54-212ENST00000556992 ZNF865P0CJ78 1059 aaPredicted RBP6.07□□□□□ -1.44
SRP54-212ENST00000556992 ZC3H12AQ5D1E8 599 aaKnown RBP6.07□□□□□ -1.44
SRP54-212ENST00000556992 SPACA3Q8IXA5 215 aa6.07□□□□□ -1.44
SRP54-212ENST00000556992 GRIN3AQ8TCU5 1115 aa6.07□□□□□ -1.44
SRP54-212ENST00000556992 CSRNP1Q96S65 589 aa6.07□□□□□ -1.44
SRP54-212ENST00000556992 TNKS2Q9H2K2 1166 aa6.07□□□□□ -1.44
SRP54-212ENST00000556992 MKNK2Q9HBH9 465 aa6.07□□□□□ -1.44
SRP54-212ENST00000556992 CBX8Q9HC52 389 aa6.07□□□□□ -1.44
SRP54-212ENST00000556992 AKAP2Q9Y2D5 859 aa6.07□□□□□ -1.44
SRP54-212ENST00000556992 CDC42BPBQ9Y5S2 1711 aa6.07□□□□□ -1.44
SRP54-212ENST00000556992 A2MP01023 1474 aa6.07□□□□□ -1.44
SRP54-212ENST00000556992 ADGBQ8N7X0 1667 aa6.07□□□□□ -1.44
SRP54-212ENST00000556992 ROCK2O75116 1388 aaKnown RBP6.06□□□□□ -1.44
SRP54-212ENST00000556992 USP47Q96K76 1375 aa6.06□□□□□ -1.44
SRP54-212ENST00000556992 KIF7Q2M1P5 1343 aa6.06□□□□□ -1.44
SRP54-212ENST00000556992 RPGRIP1LQ68CZ1 1315 aa6.06□□□□□ -1.44
SRP54-212ENST00000556992 PPP2R3AQ06190 1150 aa6.06□□□□□ -1.44
SRP54-212ENST00000556992 NKPD1Q17RQ9 610 aa6.06□□□□□ -1.44
SRP54-212ENST00000556992 CILP2Q8IUL8 1156 aa6.06□□□□□ -1.44
SRP54-212ENST00000556992 RNF214Q8ND24 703 aa6.06□□□□□ -1.44
SRP54-212ENST00000556992 FLAD1Q8NFF5 587 aa6.06□□□□□ -1.44
SRP54-212ENST00000556992 ACSBG1Q96GR2 724 aa6.06□□□□□ -1.44
SRP54-212ENST00000556992 FAM84AQ96KN4 292 aa6.06□□□□□ -1.44
SRP54-212ENST00000556992 BCO2Q9BYV7 579 aa6.06□□□□□ -1.44
SRP54-212ENST00000556992 DNAJC25Q9H1X3 360 aa6.06□□□□□ -1.44
SRP54-212ENST00000556992 MAGI2Q86UL8 1455 aa6.06□□□□□ -1.44
SRP54-212ENST00000556992 MYO5CQ9NQX4 1742 aa6.05□□□□□ -1.44
SRP54-212ENST00000556992 ATP7AQ04656 1500 aa6.05□□□□□ -1.44
SRP54-212ENST00000556992 CROCC2H7BZ55 1655 aa6.05□□□□□ -1.44
SRP54-212ENST00000556992 ARNTP27540 789 aa6.05□□□□□ -1.44
SRP54-212ENST00000556992 NTF4P34130 210 aa6.05□□□□□ -1.44
SRP54-212ENST00000556992 PRR23BQ6ZRT6 265 aa6.05□□□□□ -1.44
SRP54-212ENST00000556992 C12orf40Q86WS4 652 aa6.05□□□□□ -1.44
SRP54-212ENST00000556992 SLC52A1Q9NWF4 448 aa6.05□□□□□ -1.44
SRP54-212ENST00000556992 CTNND2Q9UQB3 1225 aa6.05□□□□□ -1.44
SRP54-212ENST00000556992 ZFYVE16Q7Z3T8 1539 aa6.04□□□□□ -1.44
SRP54-212ENST00000556992 CFPP27918 469 aa6.04□□□□□ -1.44
SRP54-212ENST00000556992 ERVK-24P63145 666 aa6.04□□□□□ -1.44
SRP54-212ENST00000556992 TMF1P82094 1093 aa6.04□□□□□ -1.44
SRP54-212ENST00000556992 NXPE4Q6UWF7 544 aa6.04□□□□□ -1.44
SRP54-212ENST00000556992 KCNK12Q9HB15 430 aa6.04□□□□□ -1.44
SRP54-212ENST00000556992 PRDM10Q9NQV6 1147 aa6.04□□□□□ -1.44
SRP54-212ENST00000556992 PRAG1Q86YV5 1406 aa6.04□□□□□ -1.44
SRP54-212ENST00000556992 GPRASP1Q5JY77 1395 aa6.04□□□□□ -1.44
SRP54-212ENST00000556992 PTPRMP28827 1452 aa6.03□□□□□ -1.44
SRP54-212ENST00000556992 RALGAPBQ86X10 1494 aa6.03□□□□□ -1.44
SRP54-212ENST00000556992 CNTNAP4Q9C0A0 1308 aa6.03□□□□□ -1.44
SRP54-212ENST00000556992 UNC13BO14795 1591 aa6.03□□□□□ -1.44
SRP54-212ENST00000556992 PRR33A8MZF0 331 aa6.03□□□□□ -1.44
SRP54-212ENST00000556992 FBXO24O75426 580 aa6.03□□□□□ -1.44
SRP54-212ENST00000556992 PAGE1O75459 146 aa6.03□□□□□ -1.44
SRP54-212ENST00000556992 ZNF252P-AS1Q0IIN9 211 aa6.03□□□□□ -1.44
SRP54-212ENST00000556992 RASIP1Q5U651 963 aa6.03□□□□□ -1.44
SRP54-212ENST00000556992 TPTE2Q6XPS3 522 aa6.03□□□□□ -1.44
SRP54-212ENST00000556992 LCNL1Q6ZST4 164 aa6.03□□□□□ -1.44
SRP54-212ENST00000556992 ASB11Q8WXH4 323 aa6.03□□□□□ -1.44
SRP54-212ENST00000556992 POLR3GLQ9BT43 218 aa6.03□□□□□ -1.44
SRP54-212ENST00000556992 PRKRIP1Q9H875 184 aaPredicted RBP6.03□□□□□ -1.44
SRP54-212ENST00000556992 CARS2Q9HA77 564 aaKnown RBP6.03□□□□□ -1.44
SRP54-212ENST00000556992 PICK1Q9NRD5 415 aa6.03□□□□□ -1.44
SRP54-212ENST00000556992 NLRP2Q9NX02 1062 aa6.03□□□□□ -1.44
SRP54-212ENST00000556992 PITPNM2Q9BZ72 1349 aa6.02□□□□□ -1.45
SRP54-212ENST00000556992 SRCAPQ6ZRS2 3230 aa6.02□□□□□ -1.45
SRP54-212ENST00000556992 EOMESO95936 686 aa6.02□□□□□ -1.45
SRP54-212ENST00000556992 NME2P22392 152 aa6.02□□□□□ -1.45
SRP54-212ENST00000556992 RAP1GAPP47736 663 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms