RNA–Protein interactions for RNA: ENST00000556952.3

SIX4-203, Transcript of SIX homeobox 4, humanhuman

TSL 5

Gene SIX4, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-203ENST00000556952 NAP1L2Q9ULW6 460 aaPredicted RBP27.81■■■□□ 2.04
SIX4-203ENST00000556952 SSC5DA1L4H1 1573 aa27.8■■■□□ 2.04
SIX4-203ENST00000556952 RCAN1P53805 252 aa27.8■■■□□ 2.04
SIX4-203ENST00000556952 RASA3Q14644 834 aa27.8■■■□□ 2.04
SIX4-203ENST00000556952 TRIM34Q9BYJ4 488 aa27.8■■■□□ 2.04
SIX4-203ENST00000556952 NID2Q14112 1375 aa27.8■■■□□ 2.04
SIX4-203ENST00000556952 SCRN1Q12765 414 aa27.79■■■□□ 2.04
SIX4-203ENST00000556952 IFIT1BQ5T764 474 aaKnown RBP27.79■■■□□ 2.04
SIX4-203ENST00000556952 CDAN1Q8IWY9 1227 aa27.79■■■□□ 2.04
SIX4-203ENST00000556952 NEDD1Q8NHV4 660 aa27.79■■■□□ 2.04
SIX4-203ENST00000556952 CSRNP1Q96S65 589 aa27.79■■■□□ 2.04
SIX4-203ENST00000556952 CREBZFQ9NS37 354 aa27.79■■■□□ 2.04
SIX4-203ENST00000556952 SLC12A7Q9Y666 1083 aa27.79■■■□□ 2.04
SIX4-203ENST00000556952 SHMT1P34896 483 aa27.78■■■□□ 2.04
SIX4-203ENST00000556952 SYNE3Q6ZMZ3 975 aa27.78■■■□□ 2.04
SIX4-203ENST00000556952 LLPHQ9BRT6 129 aaKnown RBP27.78■■■□□ 2.04
SIX4-203ENST00000556952 SENP2Q9HC62 589 aa27.78■■■□□ 2.04
SIX4-203ENST00000556952 CHMP5Q9NZZ3 219 aa27.78■■■□□ 2.04
SIX4-203ENST00000556952 HERC5Q9UII4 1024 aaKnown RBP27.78■■■□□ 2.04
SIX4-203ENST00000556952 ZBTB43O43298 467 aa27.77■■■□□ 2.04
SIX4-203ENST00000556952 DGKHQ86XP1 1220 aa27.77■■■□□ 2.04
SIX4-203ENST00000556952 TMEM39BQ9GZU3 492 aa27.77■■■□□ 2.04
SIX4-203ENST00000556952 HPS5Q9UPZ3 1129 aa27.77■■■□□ 2.04
SIX4-203ENST00000556952 SMC3Q9UQE7 1217 aa27.77■■■□□ 2.04
SIX4-203ENST00000556952 PPP2R3BQ9Y5P8 575 aa27.77■■■□□ 2.04
SIX4-203ENST00000556952 DHX16O60231 1041 aaKnown RBP27.77■■■□□ 2.04
SIX4-203ENST00000556952 ANKS1AQ92625 1134 aa27.77■■■□□ 2.04
SIX4-203ENST00000556952 CCDC17Q96LX7 622 aa27.77■■■□□ 2.04
SIX4-203ENST00000556952 DNAJC18Q9H819 358 aa27.77■■■□□ 2.04
SIX4-203ENST00000556952 PAPPA2Q9BXP8 1791 aa27.76■■■□□ 2.03
SIX4-203ENST00000556952 METAP2P50579 478 aaKnown RBP eCLIP27.76■■■□□ 2.03
SIX4-203ENST00000556952 TEPSINQ96N21 525 aa27.76■■■□□ 2.03
SIX4-203ENST00000556952 IL17RBQ9NRM6 502 aa27.76■■■□□ 2.03
SIX4-203ENST00000556952 NMT2O60551 498 aa27.75■■■□□ 2.03
SIX4-203ENST00000556952 NBPF12Q5TAG4 269 aaPredicted RBP27.75■■■□□ 2.03
SIX4-203ENST00000556952 TATDN1Q6P1N9 297 aa27.75■■■□□ 2.03
SIX4-203ENST00000556952 ZNF654Q8IZM8 581 aa27.75■■■□□ 2.03
SIX4-203ENST00000556952 CCT2P78371 535 aaKnown RBP27.74■■■□□ 2.03
SIX4-203ENST00000556952 MICU3Q86XE3 530 aa27.74■■■□□ 2.03
SIX4-203ENST00000556952 GBA2Q9HCG7 927 aaPredicted RBP27.74■■■□□ 2.03
SIX4-203ENST00000556952 RCSD1Q6JBY9 416 aa27.73■■■□□ 2.03
SIX4-203ENST00000556952 CATIPQ7Z7H3 387 aa27.73■■■□□ 2.03
SIX4-203ENST00000556952 ABT1Q9ULW3 272 aaKnown RBP27.73■■■□□ 2.03
SIX4-203ENST00000556952 FZD1Q9UP38 647 aa27.73■■■□□ 2.03
SIX4-203ENST00000556952 GOLGA8AA7E2F4 631 aa27.73■■■□□ 2.03
SIX4-203ENST00000556952 TBC1D12O60347 775 aa27.73■■■□□ 2.03
SIX4-203ENST00000556952 DDAH1O94760 285 aa27.73■■■□□ 2.03
SIX4-203ENST00000556952 CALM1P0DP23 149 aa27.73■■■□□ 2.03
SIX4-203ENST00000556952 CALM2P0DP24 149 aa27.73■■■□□ 2.03
SIX4-203ENST00000556952 CALM3P0DP25 149 aa27.73■■■□□ 2.03
SIX4-203ENST00000556952 PPP4R3BQ5MIZ7 849 aa27.73■■■□□ 2.03
SIX4-203ENST00000556952 MOB2Q70IA6 237 aa27.73■■■□□ 2.03
SIX4-203ENST00000556952 AKR1B1P15121 316 aa27.72■■■□□ 2.03
SIX4-203ENST00000556952 NOVP48745 357 aa27.72■■■□□ 2.03
SIX4-203ENST00000556952 PPP2R5BQ15173 497 aa27.72■■■□□ 2.03
SIX4-203ENST00000556952 NCOA5Q9HCD5 579 aaKnown RBP27.72■■■□□ 2.03
SIX4-203ENST00000556952 TLL2Q9Y6L7 1015 aa27.72■■■□□ 2.03
SIX4-203ENST00000556952 OTOFQ9HC10 1997 aa27.71■■■□□ 2.03
SIX4-203ENST00000556952 GJB2P29033 226 aa27.71■■■□□ 2.03
SIX4-203ENST00000556952 PRKG1Q13976 671 aa27.71■■■□□ 2.03
SIX4-203ENST00000556952 CERKLQ49MI3 558 aaPredicted RBP27.71■■■□□ 2.03
SIX4-203ENST00000556952 SAPCD2Q86UD0 394 aa27.71■■■□□ 2.03
SIX4-203ENST00000556952 SMARCC2Q8TAQ2 1214 aa27.71■■■□□ 2.03
SIX4-203ENST00000556952 KAT14Q9H8E8 782 aa27.71■■■□□ 2.03
SIX4-203ENST00000556952 IGKV6D-41A0A0C4DH26 115 aa27.7■■■□□ 2.03
SIX4-203ENST00000556952 NUCB2P80303 420 aa27.7■■■□□ 2.03
SIX4-203ENST00000556952 HMGN5P82970 282 aaKnown RBP27.7■■■□□ 2.03
SIX4-203ENST00000556952 CPLX2Q6PUV4 134 aaKnown RBP27.7■■■□□ 2.03
SIX4-203ENST00000556952 NSUN7Q8NE18 718 aaKnown RBP27.7■■■□□ 2.03
SIX4-203ENST00000556952 GNL3Q9BVP2 549 aaKnown RBP eCLIP27.7■■■□□ 2.03
SIX4-203ENST00000556952 XPO5Q9HAV4 1204 aaKnown RBP eCLIP27.7■■■□□ 2.03
SIX4-203ENST00000556952 MYH4Q9Y623 1939 aa27.7■■■□□ 2.02
SIX4-203ENST00000556952 CCDC196A0A1B0GTZ2 297 aa27.69■■■□□ 2.02
SIX4-203ENST00000556952 FAM196BA6NMK8 535 aa27.69■■■□□ 2.02
SIX4-203ENST00000556952 CPLX1O14810 134 aa27.69■■■□□ 2.02
SIX4-203ENST00000556952 NF2P35240 595 aa27.69■■■□□ 2.02
SIX4-203ENST00000556952 C2orf69Q8N8R5 385 aa27.69■■■□□ 2.02
SIX4-203ENST00000556952 CEP95Q96GE4 821 aa27.69■■■□□ 2.02
SIX4-203ENST00000556952 MYL10Q9BUA6 226 aa27.69■■■□□ 2.02
SIX4-203ENST00000556952 STX8Q9UNK0 236 aa27.69■■■□□ 2.02
SIX4-203ENST00000556952 CDKL5O76039 1030 aa27.69■■■□□ 2.02
SIX4-203ENST00000556952 CTDNEP1O95476 244 aa27.69■■■□□ 2.02
SIX4-203ENST00000556952 MAP3K10Q02779 954 aa27.69■■■□□ 2.02
SIX4-203ENST00000556952 TROAPQ12815 778 aa27.69■■■□□ 2.02
SIX4-203ENST00000556952 RTN1Q16799 776 aa27.69■■■□□ 2.02
SIX4-203ENST00000556952 RAB11FIP4Q86YS3 637 aa27.69■■■□□ 2.02
SIX4-203ENST00000556952 PTPDC1A2A3K4 754 aa27.68■■■□□ 2.02
SIX4-203ENST00000556952 PDIA4P13667 645 aaKnown RBP27.68■■■□□ 2.02
SIX4-203ENST00000556952 RXRAP19793 462 aa27.68■■■□□ 2.02
SIX4-203ENST00000556952 MAP3K14Q99558 947 aa27.68■■■□□ 2.02
SIX4-203ENST00000556952 MTMR4Q9NYA4 1195 aa27.68■■■□□ 2.02
SIX4-203ENST00000556952 KIF3AQ9Y496 699 aa27.68■■■□□ 2.02
SIX4-203ENST00000556952 MPHOSPH10O00566 681 aaKnown RBP27.67■■■□□ 2.02
SIX4-203ENST00000556952 SLURP2P0DP57 97 aa27.67■■■□□ 2.02
SIX4-203ENST00000556952 HUNKP57058 714 aa27.67■■■□□ 2.02
SIX4-203ENST00000556952 TTLL12Q14166 644 aaPredicted RBP27.67■■■□□ 2.02
SIX4-203ENST00000556952 SUPT20HL1Q3ZLR7 823 aa27.67■■■□□ 2.02
SIX4-203ENST00000556952 TMEM179Q6ZVK1 233 aa27.67■■■□□ 2.02
SIX4-203ENST00000556952 FANCBQ8NB91 859 aa27.67■■■□□ 2.02
SIX4-203ENST00000556952 PNMA1Q8ND90 353 aa27.67■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms