RNA–Protein interactions for RNA: ENST00000556827.1

HIF1A-209, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 2

Gene HIF1A, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-209ENST00000556827 PDE4BQ07343 736 aa8.35□□□□□ -1.07
HIF1A-209ENST00000556827 CBX7O95931 251 aa8.34□□□□□ -1.07
HIF1A-209ENST00000556827 ITGAEP38570 1179 aa8.34□□□□□ -1.07
HIF1A-209ENST00000556827 C22orf34Q6ZV56 151 aa8.34□□□□□ -1.07
HIF1A-209ENST00000556827 FAM168AQ92567 244 aa8.34□□□□□ -1.07
HIF1A-209ENST00000556827 HSPA12BQ96MM6 686 aa8.34□□□□□ -1.07
HIF1A-209ENST00000556827 ARHGEF11O15085 1522 aa8.34□□□□□ -1.08
HIF1A-209ENST00000556827 AQRO60306 1485 aaKnown RBP eCLIP8.33□□□□□ -1.087e-6■■□□□ 13.1
HIF1A-209ENST00000556827 RIMBP3CA6NJZ7 1639 aa8.33□□□□□ -1.08
HIF1A-209ENST00000556827 RIMBP3BA6NNM3 1639 aa8.33□□□□□ -1.08
HIF1A-209ENST00000556827 RIMBP3Q9UFD9 1639 aa8.33□□□□□ -1.08
HIF1A-209ENST00000556827 H3BS24 57 aa8.33□□□□□ -1.08
HIF1A-209ENST00000556827 BPNT1O95861 308 aa8.33□□□□□ -1.08
HIF1A-209ENST00000556827 ZNF865P0CJ78 1059 aaPredicted RBP8.33□□□□□ -1.08
HIF1A-209ENST00000556827 CYP7A1P22680 504 aa8.33□□□□□ -1.08
HIF1A-209ENST00000556827 VAMP1P23763 118 aa8.33□□□□□ -1.08
HIF1A-209ENST00000556827 RPL6Q02878 288 aaKnown RBP8.33□□□□□ -1.08
HIF1A-209ENST00000556827 PHC3Q8NDX5 983 aa8.33□□□□□ -1.08
HIF1A-209ENST00000556827 RIN3Q8TB24 985 aa8.33□□□□□ -1.08
HIF1A-209ENST00000556827 TMEM87BQ96K49 555 aa8.33□□□□□ -1.08
HIF1A-209ENST00000556827 ATP13A1Q9HD20 1204 aa8.33□□□□□ -1.08
HIF1A-209ENST00000556827 TJP2Q9UDY2 1190 aa8.33□□□□□ -1.08
HIF1A-209ENST00000556827 CNTNAP4Q9C0A0 1308 aa8.32□□□□□ -1.08
HIF1A-209ENST00000556827 DNMBPQ6XZF7 1577 aa8.32□□□□□ -1.08
HIF1A-209ENST00000556827 MRPL41Q8IXM3 137 aaKnown RBP8.32□□□□□ -1.08
HIF1A-209ENST00000556827 COPRSQ9NQ92 184 aa8.32□□□□□ -1.08
HIF1A-209ENST00000556827 CAPN6Q9Y6Q1 641 aa8.32□□□□□ -1.08
HIF1A-209ENST00000556827 SLC6A19Q695T7 634 aa8.31□□□□□ -1.08
HIF1A-209ENST00000556827 CDH24Q86UP0 819 aa8.31□□□□□ -1.08
HIF1A-209ENST00000556827 POU5F2Q8N7G0 328 aa8.31□□□□□ -1.08
HIF1A-209ENST00000556827 FLAD1Q8NFF5 587 aa8.31□□□□□ -1.08
HIF1A-209ENST00000556827 COX4I2Q96KJ9 171 aa8.31□□□□□ -1.08
HIF1A-209ENST00000556827 CARS2Q9HA77 564 aaKnown RBP8.31□□□□□ -1.08
HIF1A-209ENST00000556827 SOGA1O94964 1423 aa8.3□□□□□ -1.08
HIF1A-209ENST00000556827 CARMIL2Q6F5E8 1435 aa8.3□□□□□ -1.08
HIF1A-209ENST00000556827 ETV3P41162 512 aa8.3□□□□□ -1.08
HIF1A-209ENST00000556827 FANCCQ00597 558 aa8.3□□□□□ -1.08
HIF1A-209ENST00000556827 C9orf131Q5VYM1 1079 aa8.3□□□□□ -1.08
HIF1A-209ENST00000556827 SEMA3GQ9NS98 782 aa8.3□□□□□ -1.08
HIF1A-209ENST00000556827 LMCD1Q9NZU5 365 aa8.3□□□□□ -1.08
HIF1A-209ENST00000556827 ADAM30Q9UKF2 790 aa8.3□□□□□ -1.08
HIF1A-209ENST00000556827 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.3□□□□□ -1.08
HIF1A-209ENST00000556827 MINDY4BA8MYZ0 360 aa8.29□□□□□ -1.08
HIF1A-209ENST00000556827 ZNF76P36508 570 aa8.29□□□□□ -1.08
HIF1A-209ENST00000556827 KIR3DL1P43629 444 aa8.29□□□□□ -1.08
HIF1A-209ENST00000556827 BNC2Q6ZN30 1099 aaPredicted RBP8.29□□□□□ -1.08
HIF1A-209ENST00000556827 CCDC84Q86UT8 332 aaPredicted RBP8.29□□□□□ -1.08
HIF1A-209ENST00000556827 GGT7Q9UJ14 662 aa8.29□□□□□ -1.08
HIF1A-209ENST00000556827 TDRD9Q8NDG6 1382 aaKnown RBP8.29□□□□□ -1.08
HIF1A-209ENST00000556827 EIF4G3O43432 1585 aaKnown RBP8.29□□□□□ -1.08
HIF1A-209ENST00000556827 BTBD11A6QL63 1104 aa8.28□□□□□ -1.08
HIF1A-209ENST00000556827 PLCG1P19174 1290 aa8.28□□□□□ -1.08
HIF1A-209ENST00000556827 GBP2P32456 591 aaPredicted RBP8.28□□□□□ -1.08
HIF1A-209ENST00000556827 LMNB2Q03252 620 aa8.28□□□□□ -1.08
HIF1A-209ENST00000556827 CAMK2GQ13555 558 aaPredicted RBP8.28□□□□□ -1.08
HIF1A-209ENST00000556827 ERMP1Q7Z2K6 904 aa8.28□□□□□ -1.08
HIF1A-209ENST00000556827 THAP5Q7Z6K1 395 aa8.28□□□□□ -1.08
HIF1A-209ENST00000556827 ZSWIM9Q86XI8 627 aa8.28□□□□□ -1.08
HIF1A-209ENST00000556827 RELL1Q8IUW5 271 aa8.28□□□□□ -1.08
HIF1A-209ENST00000556827 MCATQ8IVS2 390 aaKnown RBP8.28□□□□□ -1.08
HIF1A-209ENST00000556827 ACSF2Q96CM8 615 aaPredicted RBP8.28□□□□□ -1.08
HIF1A-209ENST00000556827 KBTBD4Q9NVX7 518 aa8.28□□□□□ -1.08
HIF1A-209ENST00000556827 CORINQ9Y5Q5 1042 aa8.28□□□□□ -1.08
HIF1A-209ENST00000556827 ST14Q9Y5Y6 855 aa8.28□□□□□ -1.08
HIF1A-209ENST00000556827 PRDM2Q13029 1718 aa8.28□□□□□ -1.08
HIF1A-209ENST00000556827 POLA1P09884 1462 aaPredicted RBP8.27□□□□□ -1.09
HIF1A-209ENST00000556827 SCAMP3O14828 347 aaKnown RBP8.27□□□□□ -1.09
HIF1A-209ENST00000556827 PF4P02776 101 aa8.27□□□□□ -1.09
HIF1A-209ENST00000556827 FAM160A1Q05DH4 1040 aa8.27□□□□□ -1.09
HIF1A-209ENST00000556827 HS2ST1Q7LGA3 356 aa8.27□□□□□ -1.09
HIF1A-209ENST00000556827 FAM13CQ8NE31 585 aa8.27□□□□□ -1.09
HIF1A-209ENST00000556827 TMEM40Q8WWA1 233 aa8.27□□□□□ -1.09
HIF1A-209ENST00000556827 UBE2FQ969M7 185 aa8.27□□□□□ -1.09
HIF1A-209ENST00000556827 RSRP1Q9BUV0 290 aa8.27□□□□□ -1.09
HIF1A-209ENST00000556827 ZSWIM5Q9P217 1185 aa8.27□□□□□ -1.09
HIF1A-209ENST00000556827 CTNND2Q9UQB3 1225 aa8.27□□□□□ -1.09
HIF1A-209ENST00000556827 CILPO75339 1184 aa8.26□□□□□ -1.09
HIF1A-209ENST00000556827 F13A1P00488 732 aa8.26□□□□□ -1.09
HIF1A-209ENST00000556827 C8AP07357 584 aa8.26□□□□□ -1.09
HIF1A-209ENST00000556827 YARSP54577 528 aaKnown RBP8.26□□□□□ -1.09
HIF1A-209ENST00000556827 HDLBPQ00341 1268 aaKnown RBP8.26□□□□□ -1.09
HIF1A-209ENST00000556827 TNK2Q07912 1038 aa8.26□□□□□ -1.09
HIF1A-209ENST00000556827 PWP1Q13610 501 aa8.26□□□□□ -1.09
HIF1A-209ENST00000556827 KCNMB1Q16558 191 aa8.26□□□□□ -1.09
HIF1A-209ENST00000556827 SNAP47Q5SQN1 464 aa8.26□□□□□ -1.09
HIF1A-209ENST00000556827 ZNF648Q5T619 568 aaPredicted RBP8.26□□□□□ -1.09
HIF1A-209ENST00000556827 GATAD2BQ8WXI9 593 aa8.26□□□□□ -1.09
HIF1A-209ENST00000556827 RNF34Q969K3 372 aa8.26□□□□□ -1.09
HIF1A-209ENST00000556827 TMEM74Q96NL1 305 aa8.26□□□□□ -1.09
HIF1A-209ENST00000556827 E9PSI1 815 aa8.25□□□□□ -1.09
HIF1A-209ENST00000556827 AFMP43652 599 aa8.25□□□□□ -1.09
HIF1A-209ENST00000556827 ZNF394Q53GI3 561 aa8.25□□□□□ -1.09
HIF1A-209ENST00000556827 DNAJB8Q8NHS0 232 aa8.25□□□□□ -1.09
HIF1A-209ENST00000556827 PIWIL2Q8TC59 973 aaKnown RBP8.25□□□□□ -1.09
HIF1A-209ENST00000556827 CYB5D2Q8WUJ1 264 aa8.25□□□□□ -1.09
HIF1A-209ENST00000556827 RHOVQ96L33 236 aa8.25□□□□□ -1.09
HIF1A-209ENST00000556827 PCDHGB7Q9Y5F8 929 aa8.25□□□□□ -1.09
HIF1A-209ENST00000556827 RAD54L2Q9Y4B4 1467 aa8.25□□□□□ -1.09
HIF1A-209ENST00000556827 FAM221AA4D161 298 aa8.24□□□□□ -1.09
HIF1A-209ENST00000556827 METTL16Q86W50 562 aaKnown RBP8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms