RNA–Protein interactions for RNA: ENST00000556648.1

TMEM260-211, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,013 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-211ENST00000556648 USP17L1Q7RTZ2 530 aa11.66□□□□□ -0.54
TMEM260-211ENST00000556648 CEP57L1Q8IYX8 460 aa11.66□□□□□ -0.54
TMEM260-211ENST00000556648 JMYQ8N9B5 988 aa11.66□□□□□ -0.54
TMEM260-211ENST00000556648 KRI1Q8N9T8 703 aaKnown RBP11.66□□□□□ -0.54
TMEM260-211ENST00000556648 CABP5Q9NP86 173 aa11.66□□□□□ -0.54
TMEM260-211ENST00000556648 ROBO3Q96MS0 1386 aa11.66□□□□□ -0.54
TMEM260-211ENST00000556648 CAVIN2O95810 425 aa11.65□□□□□ -0.54
TMEM260-211ENST00000556648 IL1R1P14778 569 aa11.65□□□□□ -0.54
TMEM260-211ENST00000556648 HOXA10P31260 410 aaPredicted RBP11.65□□□□□ -0.54
TMEM260-211ENST00000556648 PLCD1P51178 756 aa11.65□□□□□ -0.54
TMEM260-211ENST00000556648 GSTO1P78417 241 aa11.65□□□□□ -0.54
TMEM260-211ENST00000556648 LRMPQ12912 555 aa11.65□□□□□ -0.54
TMEM260-211ENST00000556648 LONRF3Q496Y0 759 aa11.65□□□□□ -0.54
TMEM260-211ENST00000556648 CCDC186Q7Z3E2 898 aa11.65□□□□□ -0.54
TMEM260-211ENST00000556648 METTL16Q86W50 562 aaKnown RBP11.65□□□□□ -0.54
TMEM260-211ENST00000556648 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.65□□□□□ -0.54
TMEM260-211ENST00000556648 ADAMTSL1Q8N6G6 1762 aa11.65□□□□□ -0.54
TMEM260-211ENST00000556648 SNED1Q8TER0 1413 aa11.65□□□□□ -0.54
TMEM260-211ENST00000556648 PPEF1O14829 653 aaPredicted RBP11.65□□□□□ -0.54
TMEM260-211ENST00000556648 CALM1P0DP23 149 aa11.65□□□□□ -0.54
TMEM260-211ENST00000556648 CALM2P0DP24 149 aa11.65□□□□□ -0.54
TMEM260-211ENST00000556648 CALM3P0DP25 149 aa11.65□□□□□ -0.54
TMEM260-211ENST00000556648 KRT2P35908 639 aa11.65□□□□□ -0.54
TMEM260-211ENST00000556648 PPP4CP60510 307 aa11.65□□□□□ -0.54
TMEM260-211ENST00000556648 RASGRP2Q7LDG7 609 aa11.65□□□□□ -0.54
TMEM260-211ENST00000556648 DRC7Q8IY82 874 aa11.65□□□□□ -0.54
TMEM260-211ENST00000556648 CTCFLQ8NI51 663 aaPredicted RBP11.65□□□□□ -0.54
TMEM260-211ENST00000556648 TNFRSF25Q93038 417 aa11.65□□□□□ -0.54
TMEM260-211ENST00000556648 KCNH3Q9ULD8 1083 aa11.65□□□□□ -0.54
TMEM260-211ENST00000556648 R3HCC1Q9Y3T6 440 aaKnown RBP11.65□□□□□ -0.54
TMEM260-211ENST00000556648 BECN2A8MW95 431 aa11.64□□□□□ -0.55
TMEM260-211ENST00000556648 C6orf229H3BNL8 230 aa11.64□□□□□ -0.55
TMEM260-211ENST00000556648 NLRP12P59046 1061 aa11.64□□□□□ -0.55
TMEM260-211ENST00000556648 PPP2R5BQ15173 497 aa11.64□□□□□ -0.55
TMEM260-211ENST00000556648 SLC35G1Q2M3R5 365 aa11.64□□□□□ -0.55
TMEM260-211ENST00000556648 RILPL1Q5EBL4 403 aa11.64□□□□□ -0.55
TMEM260-211ENST00000556648 MFSD14BQ5SR56 506 aa11.64□□□□□ -0.55
TMEM260-211ENST00000556648 SARM1Q6SZW1 724 aa11.64□□□□□ -0.55
TMEM260-211ENST00000556648 USP49Q70CQ1 688 aa11.64□□□□□ -0.55
TMEM260-211ENST00000556648 COL23A1Q86Y22 540 aaPredicted RBP11.64□□□□□ -0.55
TMEM260-211ENST00000556648 STAG2Q8N3U4 1231 aa11.64□□□□□ -0.55
TMEM260-211ENST00000556648 TIGD1Q96MW7 591 aa11.64□□□□□ -0.55
TMEM260-211ENST00000556648 CRAMP1Q96RY5 1269 aa11.64□□□□□ -0.55
TMEM260-211ENST00000556648 PODXL2Q9NZ53 605 aa11.64□□□□□ -0.55
TMEM260-211ENST00000556648 CLIP2Q9UDT6 1046 aa11.64□□□□□ -0.55
TMEM260-211ENST00000556648 BAZ2BQ9UIF8 2168 aaKnown RBP11.64□□□□□ -0.55
TMEM260-211ENST00000556648 NRXN2Q9P2S2 1712 aa11.64□□□□□ -0.55
TMEM260-211ENST00000556648 KLRG2A4D1S0 409 aaPredicted RBP11.64□□□□□ -0.55
TMEM260-211ENST00000556648 RIMBP2O15034 1052 aa11.64□□□□□ -0.55
TMEM260-211ENST00000556648 BBOX1O75936 387 aa11.64□□□□□ -0.55
TMEM260-211ENST00000556648 BAG3O95817 575 aa11.64□□□□□ -0.55
TMEM260-211ENST00000556648 PRR29P0C7W0 189 aa11.64□□□□□ -0.55
TMEM260-211ENST00000556648 PTPREP23469 700 aa11.64□□□□□ -0.55
TMEM260-211ENST00000556648 TMED8Q6PL24 325 aaPredicted RBP11.64□□□□□ -0.55
TMEM260-211ENST00000556648 KRBA2Q6ZNG9 492 aa11.64□□□□□ -0.55
TMEM260-211ENST00000556648 FOXP4Q8IVH2 680 aaPredicted RBP11.64□□□□□ -0.55
TMEM260-211ENST00000556648 GRAMD1CQ8IYS0 662 aa11.64□□□□□ -0.55
TMEM260-211ENST00000556648 MTMR7Q9Y216 660 aa11.64□□□□□ -0.55
TMEM260-211ENST00000556648 FLT1P17948 1338 aa11.63□□□□□ -0.55
TMEM260-211ENST00000556648 GPR75-ASB3A0A0A6YYF3 556 aa11.63□□□□□ -0.55
TMEM260-211ENST00000556648 GOLGA6L6A8MZA4 724 aa11.63□□□□□ -0.55
TMEM260-211ENST00000556648 RASA1P20936 1047 aa11.63□□□□□ -0.55
TMEM260-211ENST00000556648 RHBDL3P58872 404 aa11.63□□□□□ -0.55
TMEM260-211ENST00000556648 ARID5BQ14865 1188 aa11.63□□□□□ -0.55
TMEM260-211ENST00000556648 NOLC1Q14978 699 aaKnown RBP eCLIP11.63□□□□□ -0.55
TMEM260-211ENST00000556648 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.63□□□□□ -0.55
TMEM260-211ENST00000556648 TEX11Q8IYF3 940 aa11.63□□□□□ -0.55
TMEM260-211ENST00000556648 GPKOWQ92917 476 aaPredicted RBP eCLIP11.63□□□□□ -0.55
TMEM260-211ENST00000556648 AKT1S1Q96B36 256 aa11.63□□□□□ -0.55
TMEM260-211ENST00000556648 NOL10Q9BSC4 688 aaKnown RBP11.63□□□□□ -0.55
TMEM260-211ENST00000556648 MXD3Q9BW11 206 aa11.63□□□□□ -0.55
TMEM260-211ENST00000556648 CSRNP2Q9H175 543 aa11.63□□□□□ -0.55
TMEM260-211ENST00000556648 KAT14Q9H8E8 782 aa11.63□□□□□ -0.55
TMEM260-211ENST00000556648 TUBE1Q9UJT0 475 aa11.63□□□□□ -0.55
TMEM260-211ENST00000556648 LDHCP07864 332 aa11.62□□□□□ -0.55
TMEM260-211ENST00000556648 SCG2P13521 617 aa11.62□□□□□ -0.55
TMEM260-211ENST00000556648 CDC25BP30305 580 aa11.62□□□□□ -0.55
TMEM260-211ENST00000556648 GTF2IP78347 998 aa11.62□□□□□ -0.55
TMEM260-211ENST00000556648 NCAPHQ15003 741 aa11.62□□□□□ -0.55
TMEM260-211ENST00000556648 MSL1Q68DK7 614 aa11.62□□□□□ -0.55
TMEM260-211ENST00000556648 PNMA1Q8ND90 353 aa11.62□□□□□ -0.55
TMEM260-211ENST00000556648 KIAA1524Q8TCG1 905 aa11.62□□□□□ -0.55
TMEM260-211ENST00000556648 MKNK2Q9HBH9 465 aa11.62□□□□□ -0.55
TMEM260-211ENST00000556648 MYH1P12882 1939 aa11.62□□□□□ -0.55
TMEM260-211ENST00000556648 FOCADQ5VW36 1801 aa11.62□□□□□ -0.55
TMEM260-211ENST00000556648 A0A087X0B3 334 aa11.62□□□□□ -0.55
TMEM260-211ENST00000556648 TRIM75PA6NK02 468 aa11.62□□□□□ -0.55
TMEM260-211ENST00000556648 XBP1P17861 261 aa11.62□□□□□ -0.55
TMEM260-211ENST00000556648 GRM4Q14833 912 aa11.62□□□□□ -0.55
TMEM260-211ENST00000556648 ZNF174Q15697 407 aa11.62□□□□□ -0.55
TMEM260-211ENST00000556648 CNNM3Q8NE01 707 aa11.62□□□□□ -0.55
TMEM260-211ENST00000556648 BPIFA3Q9BQP9 254 aa11.62□□□□□ -0.55
TMEM260-211ENST00000556648 NAT10Q9H0A0 1025 aaKnown RBP11.62□□□□□ -0.55
TMEM260-211ENST00000556648 SPTLC3Q9NUV7 552 aa11.62□□□□□ -0.55
TMEM260-211ENST00000556648 SERTAD1Q9UHV2 236 aa11.62□□□□□ -0.55
TMEM260-211ENST00000556648 F8W031 263 aaPredicted RBP11.61□□□□□ -0.55
TMEM260-211ENST00000556648 POLR2DO15514 142 aaKnown RBP11.61□□□□□ -0.55
TMEM260-211ENST00000556648 TSPY3P0CV98 308 aa11.61□□□□□ -0.55
TMEM260-211ENST00000556648 TSPY8P0CW00 308 aa11.61□□□□□ -0.55
TMEM260-211ENST00000556648 BMP6P22004 513 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms