RNA–Protein interactions for RNA: ENST00000556498.1

TDP1-215, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-215ENST00000556498 DMRTB1Q96MA1 342 aa7.11□□□□□ -1.27
TDP1-215ENST00000556498 NEUROD6Q96NK8 337 aa7.11□□□□□ -1.27
TDP1-215ENST00000556498 NAP1L3Q99457 506 aaPredicted RBP7.11□□□□□ -1.27
TDP1-215ENST00000556498 DUSP9Q99956 384 aaKnown RBP7.11□□□□□ -1.27
TDP1-215ENST00000556498 LRRCC1Q9C099 1032 aa7.11□□□□□ -1.27
TDP1-215ENST00000556498 BRD7Q9NPI1 651 aa7.11□□□□□ -1.27
TDP1-215ENST00000556498 C11orf16Q9NQ32 467 aa7.11□□□□□ -1.27
TDP1-215ENST00000556498 NDFIP2Q9NV92 336 aa7.11□□□□□ -1.27
TDP1-215ENST00000556498 DCAF16Q9NXF7 216 aa7.11□□□□□ -1.27
TDP1-215ENST00000556498 TUBA8Q9NY65 449 aaPredicted RBP7.11□□□□□ -1.27
TDP1-215ENST00000556498 KCNMB2Q9Y691 235 aa7.11□□□□□ -1.27
TDP1-215ENST00000556498 TREHO43280 583 aa7.1□□□□□ -1.27
TDP1-215ENST00000556498 CEP104O60308 925 aa7.1□□□□□ -1.27
TDP1-215ENST00000556498 ZBED4O75132 1171 aa7.1□□□□□ -1.27
TDP1-215ENST00000556498 IVLP07476 585 aa7.1□□□□□ -1.27
TDP1-215ENST00000556498 LDHCP07864 332 aa7.1□□□□□ -1.27
TDP1-215ENST00000556498 GCFC2P16383 781 aaKnown RBP7.1□□□□□ -1.27
TDP1-215ENST00000556498 EVA1CP58658 441 aa7.1□□□□□ -1.27
TDP1-215ENST00000556498 SLC7A5Q01650 507 aa7.1□□□□□ -1.27
TDP1-215ENST00000556498 FAM160A1Q05DH4 1040 aa7.1□□□□□ -1.27
TDP1-215ENST00000556498 ZBTB17Q13105 803 aa7.1□□□□□ -1.27
TDP1-215ENST00000556498 BIRC3Q13489 604 aa7.1□□□□□ -1.27
TDP1-215ENST00000556498 SAFB2Q14151 953 aaKnown RBP eCLIP7.1□□□□□ -1.27
TDP1-215ENST00000556498 NFE2L2Q16236 605 aa7.1□□□□□ -1.27
TDP1-215ENST00000556498 MUM1Q2TAK8 710 aa7.1□□□□□ -1.27
TDP1-215ENST00000556498 KIF4BQ2VIQ3 1234 aa7.1□□□□□ -1.27
TDP1-215ENST00000556498 CCDC122Q5T0U0 273 aa7.1□□□□□ -1.27
TDP1-215ENST00000556498 SFMBT2Q5VUG0 894 aa7.1□□□□□ -1.27
TDP1-215ENST00000556498 CEP135Q66GS9 1140 aa7.1□□□□□ -1.27
TDP1-215ENST00000556498 NAIF1Q69YI7 327 aaPredicted RBP7.1□□□□□ -1.27
TDP1-215ENST00000556498 MICALCLQ6ZW33 695 aa7.1□□□□□ -1.27
TDP1-215ENST00000556498 NPAS4Q8IUM7 802 aa7.1□□□□□ -1.27
TDP1-215ENST00000556498 ANKRD18AQ8IVF6 992 aa7.1□□□□□ -1.27
TDP1-215ENST00000556498 GABPB2Q8TAK5 448 aaPredicted RBP7.1□□□□□ -1.27
TDP1-215ENST00000556498 ZNF483Q8TF39 744 aaPredicted RBP7.1□□□□□ -1.27
TDP1-215ENST00000556498 ATRIPQ8WXE1 791 aa7.1□□□□□ -1.27
TDP1-215ENST00000556498 NANOS1Q8WY41 292 aaKnown RBP7.1□□□□□ -1.27
TDP1-215ENST00000556498 TRIM11Q96F44 468 aa7.1□□□□□ -1.27
TDP1-215ENST00000556498 SCLT1Q96NL6 688 aa7.1□□□□□ -1.27
TDP1-215ENST00000556498 SEPT10Q9P0V9 454 aa7.1□□□□□ -1.27
TDP1-215ENST00000556498 SFMBT1Q9UHJ3 866 aa7.1□□□□□ -1.27
TDP1-215ENST00000556498 KLF15Q9UIH9 416 aa7.1□□□□□ -1.27
TDP1-215ENST00000556498 KCNH4Q9UQ05 1017 aa7.1□□□□□ -1.27
TDP1-215ENST00000556498 FNDC3AQ9Y2H6 1198 aaKnown RBP7.1□□□□□ -1.27
TDP1-215ENST00000556498 WDR37Q9Y2I8 494 aa7.1□□□□□ -1.27
TDP1-215ENST00000556498 KHNYNO15037 678 aaKnown RBP7.09□□□□□ -1.27
TDP1-215ENST00000556498 KDM1AO60341 852 aa7.09□□□□□ -1.27
TDP1-215ENST00000556498 FOSP01100 380 aaPredicted RBP7.09□□□□□ -1.27
TDP1-215ENST00000556498 MAPTP10636 758 aaKnown RBP7.09□□□□□ -1.27
TDP1-215ENST00000556498 ERCC5P28715 1186 aaPredicted RBP7.09□□□□□ -1.27
TDP1-215ENST00000556498 TBX4P57082 545 aa7.09□□□□□ -1.27
TDP1-215ENST00000556498 EHHADHQ08426 723 aa7.09□□□□□ -1.27
TDP1-215ENST00000556498 LAMC2Q13753 1193 aa7.09□□□□□ -1.27
TDP1-215ENST00000556498 NEDD9Q14511 834 aa7.09□□□□□ -1.27
TDP1-215ENST00000556498 DSC3Q14574 896 aa7.09□□□□□ -1.27
TDP1-215ENST00000556498 IQCB1Q15051 598 aa7.09□□□□□ -1.27
TDP1-215ENST00000556498 DDB1Q16531 1140 aa7.09□□□□□ -1.27
TDP1-215ENST00000556498 CLPPQ16740 277 aaPredicted RBP7.09□□□□□ -1.27
TDP1-215ENST00000556498 C8orf34Q49A92 452 aa7.09□□□□□ -1.27
TDP1-215ENST00000556498 COBLL1Q53SF7 1204 aa7.09□□□□□ -1.27
TDP1-215ENST00000556498 XKR5Q6UX68 686 aa7.09□□□□□ -1.27
TDP1-215ENST00000556498 RSPH3Q86UC2 560 aa7.09□□□□□ -1.27
TDP1-215ENST00000556498 NT5DC4Q86YG4 428 aa7.09□□□□□ -1.27
TDP1-215ENST00000556498 BRSK2Q8IWQ3 736 aa7.09□□□□□ -1.27
TDP1-215ENST00000556498 IQUBQ8NA54 791 aa7.09□□□□□ -1.27
TDP1-215ENST00000556498 TTC16Q8NEE8 873 aa7.09□□□□□ -1.27
TDP1-215ENST00000556498 TEKT4Q8WW24 435 aa7.09□□□□□ -1.27
TDP1-215ENST00000556498 GTPBP3Q969Y2 492 aaKnown RBP7.09□□□□□ -1.27
TDP1-215ENST00000556498 BRINP2Q9C0B6 783 aa7.09□□□□□ -1.27
TDP1-215ENST00000556498 SPC25Q9HBM1 224 aa7.09□□□□□ -1.27
TDP1-215ENST00000556498 LUC7LQ9NQ29 371 aaKnown RBP7.09□□□□□ -1.27
TDP1-215ENST00000556498 GINM1Q9NU53 330 aa7.09□□□□□ -1.27
TDP1-215ENST00000556498 CHMP5Q9NZZ3 219 aa7.09□□□□□ -1.27
TDP1-215ENST00000556498 POLKQ9UBT6 870 aa7.09□□□□□ -1.27
TDP1-215ENST00000556498 SEL1LQ9UBV2 794 aa7.09□□□□□ -1.27
TDP1-215ENST00000556498 HCN2Q9UL51 889 aa7.09□□□□□ -1.27
TDP1-215ENST00000556498 N6AMT1Q9Y5N5 214 aa7.09□□□□□ -1.27
TDP1-215ENST00000556498 TOP2AP11388 1531 aaKnown RBP7.09□□□□□ -1.27
TDP1-215ENST00000556498 SOS1Q07889 1333 aaPredicted RBP7.08□□□□□ -1.28
TDP1-215ENST00000556498 EVC2Q86UK5 1308 aa7.08□□□□□ -1.28
TDP1-215ENST00000556498 GOLGA6L10A0A0M3HER8 536 aa7.08□□□□□ -1.28
TDP1-215ENST00000556498 A0A1B0GUA9 196 aa7.08□□□□□ -1.28
TDP1-215ENST00000556498 DCDC2BA2VCK2 349 aa7.08□□□□□ -1.28
TDP1-215ENST00000556498 UBAP1LF5GYI3 381 aa7.08□□□□□ -1.28
TDP1-215ENST00000556498 PDLIM1O00151 329 aa7.08□□□□□ -1.28
TDP1-215ENST00000556498 GPR182O15218 404 aa7.08□□□□□ -1.28
TDP1-215ENST00000556498 OPA1O60313 960 aa7.08□□□□□ -1.28
TDP1-215ENST00000556498 EGFRP00533 1210 aa7.08□□□□□ -1.28
TDP1-215ENST00000556498 RLBP1P12271 317 aa7.08□□□□□ -1.28
TDP1-215ENST00000556498 CHMLP26374 656 aa7.08□□□□□ -1.28
TDP1-215ENST00000556498 PLCB3Q01970 1234 aa7.08□□□□□ -1.28
TDP1-215ENST00000556498 NSUN2Q08J23 767 aaKnown RBP eCLIP7.08□□□□□ -1.28
TDP1-215ENST00000556498 TRIP4Q15650 581 aaPredicted RBP7.08□□□□□ -1.28
TDP1-215ENST00000556498 ALDH1L2Q3SY69 923 aa7.08□□□□□ -1.28
TDP1-215ENST00000556498 WAPLQ7Z5K2 1190 aa7.08□□□□□ -1.28
TDP1-215ENST00000556498 SRLQ86TD4 932 aa7.08□□□□□ -1.28
TDP1-215ENST00000556498 C10orf67Q8IYJ2 551 aa7.08□□□□□ -1.28
TDP1-215ENST00000556498 VWA5B2Q8N398 1253 aa7.08□□□□□ -1.28
TDP1-215ENST00000556498 PAF1Q8N7H5 531 aa7.08□□□□□ -1.28
TDP1-215ENST00000556498 KIAA1958Q8N8K9 716 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms