RNA–Protein interactions for RNA: ENST00000556462.1

LINC01550-206, Transcript of long intergenic non-protein coding RNA 1550, humanhuman

TSL 2 BASIC

Gene LINC01550, Length 2,098 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01550-206ENST00000556462 PHKBQ93100 1093 aa12.63□□□□□ -0.39
LINC01550-206ENST00000556462 GBP4Q96PP9 640 aa12.63□□□□□ -0.39
LINC01550-206ENST00000556462 TMEM47Q9BQJ4 181 aa12.63□□□□□ -0.39
LINC01550-206ENST00000556462 TAOK2Q9UL54 1235 aa12.63□□□□□ -0.39
LINC01550-206ENST00000556462 STX8Q9UNK0 236 aa12.63□□□□□ -0.39
LINC01550-206ENST00000556462 PLIN4Q96Q06 1357 aa12.63□□□□□ -0.39
LINC01550-206ENST00000556462 SIPA1L1O43166 1804 aa12.63□□□□□ -0.39
LINC01550-206ENST00000556462 CDKL5O76039 1030 aa12.63□□□□□ -0.39
LINC01550-206ENST00000556462 CALM1P0DP23 149 aa12.63□□□□□ -0.39
LINC01550-206ENST00000556462 CALM2P0DP24 149 aa12.63□□□□□ -0.39
LINC01550-206ENST00000556462 CALM3P0DP25 149 aa12.63□□□□□ -0.39
LINC01550-206ENST00000556462 NBPF11Q86T75 865 aa12.63□□□□□ -0.39
LINC01550-206ENST00000556462 FAM83AQ86UY5 434 aa12.63□□□□□ -0.39
LINC01550-206ENST00000556462 GPC2Q8N158 579 aa12.63□□□□□ -0.39
LINC01550-206ENST00000556462 CRACR2BQ8N4Y2 399 aaPredicted RBP12.63□□□□□ -0.39
LINC01550-206ENST00000556462 PNMA1Q8ND90 353 aa12.63□□□□□ -0.39
LINC01550-206ENST00000556462 CCDC17Q96LX7 622 aa12.63□□□□□ -0.39
LINC01550-206ENST00000556462 CSRNP1Q96S65 589 aa12.63□□□□□ -0.39
LINC01550-206ENST00000556462 KAT14Q9H8E8 782 aa12.63□□□□□ -0.39
LINC01550-206ENST00000556462 VEZTQ9HBM0 779 aa12.63□□□□□ -0.39
LINC01550-206ENST00000556462 MTMR4Q9NYA4 1195 aa12.63□□□□□ -0.39
LINC01550-206ENST00000556462 PGAP2Q9UHJ9 254 aa12.63□□□□□ -0.39
LINC01550-206ENST00000556462 KIF3AQ9Y496 699 aa12.63□□□□□ -0.39
LINC01550-206ENST00000556462 SBF1O95248 1867 aa12.62□□□□□ -0.39
LINC01550-206ENST00000556462 FUT2Q10981 343 aa12.62□□□□□ -0.39
LINC01550-206ENST00000556462 TBC1D10BQ4KMP7 808 aaPredicted RBP12.62□□□□□ -0.39
LINC01550-206ENST00000556462 CMTR1Q8N1G2 835 aaKnown RBP12.62□□□□□ -0.39
LINC01550-206ENST00000556462 UBE2Q2LH0YL09 131 aa12.61□□□□□ -0.39
LINC01550-206ENST00000556462 CDAN1Q8IWY9 1227 aa12.61□□□□□ -0.39
LINC01550-206ENST00000556462 CCDC82Q8N4S0 544 aa12.61□□□□□ -0.39
LINC01550-206ENST00000556462 MAP3K14Q99558 947 aa12.61□□□□□ -0.39
LINC01550-206ENST00000556462 TMEM39BQ9GZU3 492 aa12.61□□□□□ -0.39
LINC01550-206ENST00000556462 RNF181Q9P0P0 153 aa12.61□□□□□ -0.39
LINC01550-206ENST00000556462 DICER1Q9UPY3 1922 aaKnown RBP12.61□□□□□ -0.39
LINC01550-206ENST00000556462 FMNL1O95466 1100 aaPredicted RBP12.61□□□□□ -0.39
LINC01550-206ENST00000556462 CERKLQ49MI3 558 aaPredicted RBP12.61□□□□□ -0.39
LINC01550-206ENST00000556462 RBM28Q9NW13 759 aaKnown RBP12.61□□□□□ -0.39
LINC01550-206ENST00000556462 GPRC5DQ9NZD1 345 aa12.61□□□□□ -0.39
LINC01550-206ENST00000556462 ASTN2O75129 1339 aaPredicted RBP12.61□□□□□ -0.39
LINC01550-206ENST00000556462 STK36Q9NRP7 1315 aa12.61□□□□□ -0.39
LINC01550-206ENST00000556462 H3BQV1 296 aa12.6□□□□□ -0.39
LINC01550-206ENST00000556462 H7C1D1 291 aa12.6□□□□□ -0.39
LINC01550-206ENST00000556462 PLEKHA8P1O95397 391 aa12.6□□□□□ -0.39
LINC01550-206ENST00000556462 TOP1P11387 765 aaKnown RBP12.6□□□□□ -0.39
LINC01550-206ENST00000556462 GUCY1A2P33402 732 aa12.6□□□□□ -0.39
LINC01550-206ENST00000556462 SSRP1Q08945 709 aaKnown RBP12.6□□□□□ -0.39
LINC01550-206ENST00000556462 RRP1BQ14684 758 aaKnown RBP12.6□□□□□ -0.39
LINC01550-206ENST00000556462 SHROOM1Q2M3G4 852 aaPredicted RBP12.6□□□□□ -0.39
LINC01550-206ENST00000556462 FOXD4L6Q3SYB3 417 aaPredicted RBP12.6□□□□□ -0.39
LINC01550-206ENST00000556462 IFFO2Q5TF58 517 aa12.6□□□□□ -0.39
LINC01550-206ENST00000556462 FOXD4L3Q6VB84 417 aaPredicted RBP12.6□□□□□ -0.39
LINC01550-206ENST00000556462 FERMT3Q86UX7 667 aa12.6□□□□□ -0.39
LINC01550-206ENST00000556462 FBXO18Q8NFZ0 1043 aa12.6□□□□□ -0.39
LINC01550-206ENST00000556462 AIFM3Q96NN9 605 aa12.6□□□□□ -0.39
LINC01550-206ENST00000556462 SLC26A6Q9BXS9 759 aa12.6□□□□□ -0.39
LINC01550-206ENST00000556462 GJB4Q9NTQ9 266 aa12.6□□□□□ -0.39
LINC01550-206ENST00000556462 HERC5Q9UII4 1024 aaKnown RBP12.6□□□□□ -0.39
LINC01550-206ENST00000556462 SCAF8Q9UPN6 1271 aaKnown RBP12.6□□□□□ -0.39
LINC01550-206ENST00000556462 DDNO94850 711 aaPredicted RBP12.6□□□□□ -0.39
LINC01550-206ENST00000556462 RASA3Q14644 834 aa12.6□□□□□ -0.39
LINC01550-206ENST00000556462 KIF4BQ2VIQ3 1234 aa12.6□□□□□ -0.39
LINC01550-206ENST00000556462 C9orf131Q5VYM1 1079 aa12.6□□□□□ -0.39
LINC01550-206ENST00000556462 MCTP1Q6DN14 999 aa12.6□□□□□ -0.39
LINC01550-206ENST00000556462 TMTC3Q6ZXV5 915 aa12.6□□□□□ -0.39
LINC01550-206ENST00000556462 CLEC10AQ8IUN9 316 aa12.6□□□□□ -0.39
LINC01550-206ENST00000556462 SRBD1Q8N5C6 995 aaKnown RBP12.6□□□□□ -0.39
LINC01550-206ENST00000556462 CTCFLQ8NI51 663 aaPredicted RBP12.6□□□□□ -0.39
LINC01550-206ENST00000556462 MPHOSPH10O00566 681 aaKnown RBP12.59□□□□□ -0.39
LINC01550-206ENST00000556462 TBC1D12O60347 775 aa12.59□□□□□ -0.39
LINC01550-206ENST00000556462 EPS15P42566 896 aa12.59□□□□□ -0.39
LINC01550-206ENST00000556462 FOSBP53539 338 aa12.59□□□□□ -0.39
LINC01550-206ENST00000556462 JAG1P78504 1218 aa12.59□□□□□ -0.39
LINC01550-206ENST00000556462 GUCY1B3Q02153 619 aa12.59□□□□□ -0.39
LINC01550-206ENST00000556462 MAP3K10Q02779 954 aa12.59□□□□□ -0.39
LINC01550-206ENST00000556462 OTUD7BQ6GQQ9 843 aa12.59□□□□□ -0.39
LINC01550-206ENST00000556462 STAG2Q8N3U4 1231 aa12.59□□□□□ -0.39
LINC01550-206ENST00000556462 RGS22Q8NE09 1264 aa12.59□□□□□ -0.39
LINC01550-206ENST00000556462 C8orf76Q96K31 380 aa12.59□□□□□ -0.39
LINC01550-206ENST00000556462 ALG1Q9BT22 464 aa12.59□□□□□ -0.39
LINC01550-206ENST00000556462 RNF26Q9BY78 433 aaPredicted RBP12.59□□□□□ -0.39
LINC01550-206ENST00000556462 TRIM34Q9BYJ4 488 aa12.59□□□□□ -0.39
LINC01550-206ENST00000556462 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.59□□□□□ -0.39
LINC01550-206ENST00000556462 MAD2L2Q9UI95 211 aa12.59□□□□□ -0.39
LINC01550-206ENST00000556462 HACL1Q9UJ83 578 aa12.59□□□□□ -0.39
LINC01550-206ENST00000556462 TTLL1O95922 423 aa12.58□□□□□ -0.39
LINC01550-206ENST00000556462 KIF5BP33176 963 aa12.58□□□□□ -0.39
LINC01550-206ENST00000556462 RESTQ13127 1097 aa12.58□□□□□ -0.39
LINC01550-206ENST00000556462 GRM4Q14833 912 aa12.58□□□□□ -0.39
LINC01550-206ENST00000556462 SIAH1Q8IUQ4 282 aa12.58□□□□□ -0.39
LINC01550-206ENST00000556462 TRIM22Q8IYM9 498 aa12.58□□□□□ -0.39
LINC01550-206ENST00000556462 TRPM4Q8TD43 1214 aa12.58□□□□□ -0.39
LINC01550-206ENST00000556462 TEPSINQ96N21 525 aa12.58□□□□□ -0.39
LINC01550-206ENST00000556462 CLIP2Q9UDT6 1046 aa12.58□□□□□ -0.39
LINC01550-206ENST00000556462 ATP6V1DQ9Y5K8 247 aa12.58□□□□□ -0.39
LINC01550-206ENST00000556462 PALM3A6NDB9 673 aaPredicted RBP12.58□□□□□ -0.4
LINC01550-206ENST00000556462 DDX11L8A8MPP1 907 aa12.58□□□□□ -0.4
LINC01550-206ENST00000556462 PRPF3O43395 683 aaKnown RBP12.58□□□□□ -0.4
LINC01550-206ENST00000556462 DEXIO95424 95 aa12.58□□□□□ -0.4
LINC01550-206ENST00000556462 TNNI2P48788 182 aa12.58□□□□□ -0.4
LINC01550-206ENST00000556462 HIRAP54198 1017 aaPredicted RBP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms