RNA–Protein interactions for RNA: ENST00000556083.1

ACTN1-216, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 4,674 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-216ENST00000556083 ZNF445P59923 1031 aa11.89□□□□□ -0.51
ACTN1-216ENST00000556083 IRX3P78415 501 aaPredicted RBP11.89□□□□□ -0.51
ACTN1-216ENST00000556083 TSHZ3Q63HK5 1081 aa11.89□□□□□ -0.51
ACTN1-216ENST00000556083 OGFRQ9NZT2 677 aa11.89□□□□□ -0.51
ACTN1-216ENST00000556083 NOC2LQ9Y3T9 749 aaKnown RBP11.89□□□□□ -0.51
ACTN1-216ENST00000556083 PHLPP2Q6ZVD8 1323 aa11.89□□□□□ -0.51
ACTN1-216ENST00000556083 KDRP35968 1356 aa11.89□□□□□ -0.51
ACTN1-216ENST00000556083 RPAP1Q9BWH6 1393 aaPredicted RBP11.89□□□□□ -0.51
ACTN1-216ENST00000556083 YEATS2Q9ULM3 1422 aa11.89□□□□□ -0.51
ACTN1-216ENST00000556083 CAPN2P17655 700 aa11.89□□□□□ -0.51
ACTN1-216ENST00000556083 RASSF2P50749 326 aa11.89□□□□□ -0.51
ACTN1-216ENST00000556083 OTUD7BQ6GQQ9 843 aa11.89□□□□□ -0.51
ACTN1-216ENST00000556083 SPATS2Q86XZ4 545 aaKnown RBP11.89□□□□□ -0.51
ACTN1-216ENST00000556083 V9GY48 417 aaPredicted RBP11.89□□□□□ -0.51
ACTN1-216ENST00000556083 PPFIA4O75335 1185 aa11.89□□□□□ -0.51
ACTN1-216ENST00000556083 KRT5P13647 590 aa11.89□□□□□ -0.51
ACTN1-216ENST00000556083 HERC4Q5GLZ8 1057 aaPredicted RBP11.89□□□□□ -0.51
ACTN1-216ENST00000556083 STMN2Q93045 179 aa11.89□□□□□ -0.51
ACTN1-216ENST00000556083 FAM212AQ96EL1 285 aa11.89□□□□□ -0.51
ACTN1-216ENST00000556083 LARSQ9P2J5 1176 aaKnown RBP11.89□□□□□ -0.51
ACTN1-216ENST00000556083 KDM5DQ9BY66 1539 aa11.89□□□□□ -0.51
ACTN1-216ENST00000556083 B4E1Z4 1266 aa11.89□□□□□ -0.51
ACTN1-216ENST00000556083 DAPK3O43293 454 aa11.89□□□□□ -0.51
ACTN1-216ENST00000556083 CIAO1O76071 339 aa11.89□□□□□ -0.51
ACTN1-216ENST00000556083 ZWINTO95229 277 aa11.89□□□□□ -0.51
ACTN1-216ENST00000556083 MAN1A1P33908 653 aa11.89□□□□□ -0.51
ACTN1-216ENST00000556083 APBA1Q02410 837 aa11.89□□□□□ -0.51
ACTN1-216ENST00000556083 KIF22Q14807 665 aa11.89□□□□□ -0.51
ACTN1-216ENST00000556083 MUM1L1Q5H9M0 696 aa11.89□□□□□ -0.51
ACTN1-216ENST00000556083 CACYBPQ9HB71 228 aaKnown RBP11.89□□□□□ -0.51
ACTN1-216ENST00000556083 WDR17Q8IZU2 1322 aa11.88□□□□□ -0.51
ACTN1-216ENST00000556083 GOLGA8QA0A0J9YX86 632 aa11.88□□□□□ -0.51
ACTN1-216ENST00000556083 GOLGA8OA6NCC3 632 aa11.88□□□□□ -0.51
ACTN1-216ENST00000556083 GOLGA8NF8WBI6 632 aa11.88□□□□□ -0.51
ACTN1-216ENST00000556083 CCNT1O60563 726 aaKnown RBP11.88□□□□□ -0.51
ACTN1-216ENST00000556083 EXOC3O60645 756 aa11.88□□□□□ -0.51
ACTN1-216ENST00000556083 ARHGAP25P42331 645 aa11.88□□□□□ -0.51
ACTN1-216ENST00000556083 PPP2R5AQ15172 486 aa11.88□□□□□ -0.51
ACTN1-216ENST00000556083 UBE3CQ15386 1083 aa11.88□□□□□ -0.51
ACTN1-216ENST00000556083 GPATCH4Q5T3I0 446 aaKnown RBP11.88□□□□□ -0.51
ACTN1-216ENST00000556083 PAIP2Q9BPZ3 127 aaKnown RBP11.88□□□□□ -0.51
ACTN1-216ENST00000556083 SELENOSQ9BQE4 189 aa11.88□□□□□ -0.51
ACTN1-216ENST00000556083 VCX3BQ9H321 246 aa11.88□□□□□ -0.51
ACTN1-216ENST00000556083 LEMD3Q9Y2U8 911 aa11.88□□□□□ -0.51
ACTN1-216ENST00000556083 BZW2Q9Y6E2 419 aaKnown RBP11.88□□□□□ -0.51
ACTN1-216ENST00000556083 MAGEA1P43355 309 aa11.88□□□□□ -0.51
ACTN1-216ENST00000556083 ZNF174Q15697 407 aa11.88□□□□□ -0.51
ACTN1-216ENST00000556083 ADALQ6DHV7 355 aa11.88□□□□□ -0.51
ACTN1-216ENST00000556083 CSRNP1Q96S65 589 aa11.88□□□□□ -0.51
ACTN1-216ENST00000556083 ADPGKQ9BRR6 497 aa11.88□□□□□ -0.51
ACTN1-216ENST00000556083 LARP6Q9BRS8 491 aaKnown RBP11.88□□□□□ -0.51
ACTN1-216ENST00000556083 THAP12O43422 761 aa11.88□□□□□ -0.51
ACTN1-216ENST00000556083 GCFC2P16383 781 aaKnown RBP11.88□□□□□ -0.51
ACTN1-216ENST00000556083 CA8P35219 290 aa11.88□□□□□ -0.51
ACTN1-216ENST00000556083 CUL4BQ13620 913 aa11.88□□□□□ -0.51
ACTN1-216ENST00000556083 DPY19L2Q6NUT2 758 aa11.88□□□□□ -0.51
ACTN1-216ENST00000556083 DCUN1D2Q6PH85 259 aa11.88□□□□□ -0.51
ACTN1-216ENST00000556083 SSH3Q8TE77 659 aa11.88□□□□□ -0.51
ACTN1-216ENST00000556083 CDHR1Q96JP9 859 aa11.88□□□□□ -0.51
ACTN1-216ENST00000556083 PSMC4P43686 418 aa11.87□□□□□ -0.51
ACTN1-216ENST00000556083 CCNA1P78396 465 aa11.87□□□□□ -0.51
ACTN1-216ENST00000556083 POSTNQ15063 836 aa11.87□□□□□ -0.51
ACTN1-216ENST00000556083 SFMBT2Q5VUG0 894 aa11.87□□□□□ -0.51
ACTN1-216ENST00000556083 PIK3AP1Q6ZUJ8 805 aa11.87□□□□□ -0.51
ACTN1-216ENST00000556083 CABP7Q86V35 215 aa11.87□□□□□ -0.51
ACTN1-216ENST00000556083 TRIM58Q8NG06 486 aa11.87□□□□□ -0.51
ACTN1-216ENST00000556083 RNF34Q969K3 372 aa11.87□□□□□ -0.51
ACTN1-216ENST00000556083 TRIM11Q96F44 468 aa11.87□□□□□ -0.51
ACTN1-216ENST00000556083 FAM89AQ96GI7 184 aa11.87□□□□□ -0.51
ACTN1-216ENST00000556083 DBNDD2Q9BQY9 259 aa11.87□□□□□ -0.51
ACTN1-216ENST00000556083 CRCPO75575 148 aa11.87□□□□□ -0.51
ACTN1-216ENST00000556083 TPD52P55327 224 aaPredicted RBP11.87□□□□□ -0.51
ACTN1-216ENST00000556083 EIF4A1P60842 406 aaKnown RBP11.87□□□□□ -0.51
ACTN1-216ENST00000556083 ARID5AQ03989 594 aa11.87□□□□□ -0.51
ACTN1-216ENST00000556083 HADHQ16836 314 aaKnown RBP11.87□□□□□ -0.51
ACTN1-216ENST00000556083 TRMT1LQ7Z2T5 733 aaKnown RBP11.87□□□□□ -0.51
ACTN1-216ENST00000556083 TCEANC2Q96MN5 208 aa11.87□□□□□ -0.51
ACTN1-216ENST00000556083 RIOK1Q9BRS2 568 aaKnown RBP11.87□□□□□ -0.51
ACTN1-216ENST00000556083 TYW1Q9NV66 732 aaKnown RBP11.87□□□□□ -0.51
ACTN1-216ENST00000556083 SNX14Q9Y5W7 946 aa11.87□□□□□ -0.51
ACTN1-216ENST00000556083 RIMBP2O15034 1052 aa11.87□□□□□ -0.51
ACTN1-216ENST00000556083 FANCCQ00597 558 aa11.87□□□□□ -0.51
ACTN1-216ENST00000556083 KRT40Q6A162 431 aa11.87□□□□□ -0.51
ACTN1-216ENST00000556083 NCAPGQ9BPX3 1015 aa11.87□□□□□ -0.51
ACTN1-216ENST00000556083 ZSWIM4Q9H7M6 989 aa11.87□□□□□ -0.51
ACTN1-216ENST00000556083 TMOD1P28289 359 aa11.87□□□□□ -0.51
ACTN1-216ENST00000556083 LMNB2Q03252 620 aa11.87□□□□□ -0.51
ACTN1-216ENST00000556083 TSPYL6Q8N831 410 aa11.87□□□□□ -0.51
ACTN1-216ENST00000556083 ZBTB38Q8NAP3 1195 aaPredicted RBP11.87□□□□□ -0.51
ACTN1-216ENST00000556083 GSDMBQ8TAX9 411 aa11.87□□□□□ -0.51
ACTN1-216ENST00000556083 PHACTR3Q96KR7 559 aa11.87□□□□□ -0.51
ACTN1-216ENST00000556083 AK8Q96MA6 479 aa11.87□□□□□ -0.51
ACTN1-216ENST00000556083 CARD14Q9BXL6 1004 aa11.87□□□□□ -0.51
ACTN1-216ENST00000556083 BIN2Q9UBW5 565 aaPredicted RBP11.87□□□□□ -0.51
ACTN1-216ENST00000556083 WWC3Q9ULE0 1092 aa11.87□□□□□ -0.51
ACTN1-216ENST00000556083 COL4A3BPQ9Y5P4 624 aa11.87□□□□□ -0.51
ACTN1-216ENST00000556083 PTPRKQ15262 1439 aa11.86□□□□□ -0.51
ACTN1-216ENST00000556083 PHBP35232 272 aa11.86□□□□□ -0.51
ACTN1-216ENST00000556083 PRIM1P49642 420 aaKnown RBP11.86□□□□□ -0.51
ACTN1-216ENST00000556083 RPS6KA1Q15418 735 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms