RNA–Protein interactions for RNA: ENST00000555964.5

XRCC3-215, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 4

Gene XRCC3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-215ENST00000555964 ABCB5Q2M3G0 1257 aa20.61■□□□□ 0.89
XRCC3-215ENST00000555964 CERKLQ49MI3 558 aaPredicted RBP20.61■□□□□ 0.89
XRCC3-215ENST00000555964 MORN1Q5T089 497 aa20.61■□□□□ 0.89
XRCC3-215ENST00000555964 GPR153Q6NV75 609 aa20.61■□□□□ 0.89
XRCC3-215ENST00000555964 USP6NLQ92738 828 aa20.61■□□□□ 0.89
XRCC3-215ENST00000555964 EAF2Q96CJ1 260 aaPredicted RBP20.61■□□□□ 0.89
XRCC3-215ENST00000555964 GDF15Q99988 308 aa20.61■□□□□ 0.89
XRCC3-215ENST00000555964 ZMYND8Q9ULU4 1186 aaPredicted RBP20.61■□□□□ 0.89
XRCC3-215ENST00000555964 MYH8P13535 1937 aa20.61■□□□□ 0.89
XRCC3-215ENST00000555964 SHROOM1Q2M3G4 852 aaPredicted RBP20.6■□□□□ 0.89
XRCC3-215ENST00000555964 MFSD14CQ5VZR4 134 aa20.6■□□□□ 0.89
XRCC3-215ENST00000555964 KIAA1683Q9H0B3 1180 aa20.6■□□□□ 0.89
XRCC3-215ENST00000555964 PORCNQ9H237 461 aa20.6■□□□□ 0.89
XRCC3-215ENST00000555964 TLR7Q9NYK1 1049 aaKnown RBP20.6■□□□□ 0.89
XRCC3-215ENST00000555964 IVNS1ABPQ9Y6Y0 642 aa20.6■□□□□ 0.89
XRCC3-215ENST00000555964 MNX1P50219 401 aaPredicted RBP20.59■□□□□ 0.89
XRCC3-215ENST00000555964 CACNB2Q08289 660 aaPredicted RBP20.59■□□□□ 0.89
XRCC3-215ENST00000555964 MAP2K5Q13163 448 aa20.59■□□□□ 0.89
XRCC3-215ENST00000555964 ZYXQ15942 572 aaKnown RBP20.59■□□□□ 0.89
XRCC3-215ENST00000555964 Q3C1V9 767 aa20.59■□□□□ 0.89
XRCC3-215ENST00000555964 AACSQ86V21 672 aa20.59■□□□□ 0.89
XRCC3-215ENST00000555964 SLC15A5A6NIM6 579 aa20.58■□□□□ 0.89
XRCC3-215ENST00000555964 MSCO60682 206 aa20.58■□□□□ 0.89
XRCC3-215ENST00000555964 WDR78Q5VTH9 848 aa20.58■□□□□ 0.89
XRCC3-215ENST00000555964 CEP85Q6P2H3 762 aa20.58■□□□□ 0.89
XRCC3-215ENST00000555964 LBX2Q6XYB7 198 aa20.58■□□□□ 0.89
XRCC3-215ENST00000555964 CATSPERGQ6ZRH7 1159 aa20.58■□□□□ 0.89
XRCC3-215ENST00000555964 EDC3Q96F86 508 aaKnown RBP20.58■□□□□ 0.89
XRCC3-215ENST00000555964 PEX10O60683 326 aa20.57■□□□□ 0.88
XRCC3-215ENST00000555964 POLR3DP05423 398 aaPredicted RBP20.57■□□□□ 0.88
XRCC3-215ENST00000555964 VCAM1P19320 739 aa20.57■□□□□ 0.88
XRCC3-215ENST00000555964 CRNKL1Q9BZJ0 848 aaKnown RBP20.57■□□□□ 0.88
XRCC3-215ENST00000555964 PFASO15067 1338 aa20.56■□□□□ 0.88
XRCC3-215ENST00000555964 MAGEB6P1A0A0J9YX57 407 aa20.56■□□□□ 0.88
XRCC3-215ENST00000555964 SOX1O00570 391 aaPredicted RBP20.56■□□□□ 0.88
XRCC3-215ENST00000555964 MAGEA10P43363 369 aaPredicted RBP20.56■□□□□ 0.88
XRCC3-215ENST00000555964 HNRNPUQ00839 825 aaKnown RBP eCLIP20.56■□□□□ 0.88
XRCC3-215ENST00000555964 TDHQ8IZJ6 230 aa20.56■□□□□ 0.88
XRCC3-215ENST00000555964 LRCH3Q96II8 777 aa20.56■□□□□ 0.88
XRCC3-215ENST00000555964 MS4A1P11836 297 aa20.55■□□□□ 0.88
XRCC3-215ENST00000555964 COL6A1P12109 1028 aa20.55■□□□□ 0.88
XRCC3-215ENST00000555964 RLBP1P12271 317 aa20.55■□□□□ 0.88
XRCC3-215ENST00000555964 SYN1P17600 705 aa20.55■□□□□ 0.88
XRCC3-215ENST00000555964 CCND3P30281 292 aaPredicted RBP20.55■□□□□ 0.88
XRCC3-215ENST00000555964 CCL14Q16627 93 aa20.55■□□□□ 0.88
XRCC3-215ENST00000555964 LRIT3Q3SXY7 679 aa20.55■□□□□ 0.88
XRCC3-215ENST00000555964 UBE2OQ9C0C9 1292 aaKnown RBP20.55■□□□□ 0.88
XRCC3-215ENST00000555964 ANTXR1Q9H6X2 564 aa20.55■□□□□ 0.88
XRCC3-215ENST00000555964 EXOC6BQ9Y2D4 811 aa20.55■□□□□ 0.88
XRCC3-215ENST00000555964 LAMA3Q16787 3333 aa20.55■□□□□ 0.88
XRCC3-215ENST00000555964 ZNF236Q9UL36 1845 aa20.55■□□□□ 0.88
XRCC3-215ENST00000555964 CNMDO75829 334 aa20.54■□□□□ 0.88
XRCC3-215ENST00000555964 HOXC6P09630 235 aa20.54■□□□□ 0.88
XRCC3-215ENST00000555964 PTPREP23469 700 aa20.54■□□□□ 0.88
XRCC3-215ENST00000555964 SHMT1P34896 483 aa20.54■□□□□ 0.88
XRCC3-215ENST00000555964 ATP2B2Q01814 1243 aa20.54■□□□□ 0.88
XRCC3-215ENST00000555964 GRB14Q14449 540 aa20.54■□□□□ 0.88
XRCC3-215ENST00000555964 LHX8Q68G74 356 aa20.54■□□□□ 0.88
XRCC3-215ENST00000555964 CLASRPQ8N2M8 674 aaKnown RBP20.54■□□□□ 0.88
XRCC3-215ENST00000555964 SLC17A8Q8NDX2 589 aa20.54■□□□□ 0.88
XRCC3-215ENST00000555964 RIOK1Q9BRS2 568 aaKnown RBP20.54■□□□□ 0.88
XRCC3-215ENST00000555964 RPAP3Q9H6T3 665 aaPredicted RBP20.54■□□□□ 0.88
XRCC3-215ENST00000555964 SLC9C2Q5TAH2 1124 aa20.53■□□□□ 0.88
XRCC3-215ENST00000555964 ACER1Q8TDN7 264 aa20.53■□□□□ 0.88
XRCC3-215ENST00000555964 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.53■□□□□ 0.88
XRCC3-215ENST00000555964 HOXC10Q9NYD6 342 aa20.53■□□□□ 0.88
XRCC3-215ENST00000555964 NDUFB9Q9Y6M9 179 aa20.53■□□□□ 0.88
XRCC3-215ENST00000555964 SPDYE16A6NNV3 312 aaPredicted RBP20.52■□□□□ 0.88
XRCC3-215ENST00000555964 MPHOSPH10O00566 681 aaKnown RBP20.52■□□□□ 0.88
XRCC3-215ENST00000555964 HMMRO75330 724 aa20.52■□□□□ 0.88
XRCC3-215ENST00000555964 PDE6AP16499 860 aa20.52■□□□□ 0.88
XRCC3-215ENST00000555964 PLCD1P51178 756 aa20.52■□□□□ 0.88
XRCC3-215ENST00000555964 GABPAQ06546 454 aa20.52■□□□□ 0.88
XRCC3-215ENST00000555964 POTEEQ6S8J3 1075 aa20.52■□□□□ 0.88
XRCC3-215ENST00000555964 RHPN1Q8TCX5 695 aa20.52■□□□□ 0.88
XRCC3-215ENST00000555964 SH2D4AQ9H788 454 aa20.52■□□□□ 0.88
XRCC3-215ENST00000555964 MCM9Q9NXL9 1143 aa20.52■□□□□ 0.88
XRCC3-215ENST00000555964 SLC5A4Q9NY91 659 aa20.52■□□□□ 0.88
XRCC3-215ENST00000555964 SWAP70Q9UH65 585 aa20.52■□□□□ 0.88
XRCC3-215ENST00000555964 DDX20Q9UHI6 824 aaKnown RBP20.52■□□□□ 0.88
XRCC3-215ENST00000555964 COG2Q14746 738 aa20.51■□□□□ 0.87
XRCC3-215ENST00000555964 MB21D1Q8N884 522 aa20.51■□□□□ 0.87
XRCC3-215ENST00000555964 LPAR1Q92633 364 aa20.51■□□□□ 0.87
XRCC3-215ENST00000555964 KIF1BPQ96EK5 621 aa20.51■□□□□ 0.87
XRCC3-215ENST00000555964 MYH7P12883 1935 aa20.51■□□□□ 0.87
XRCC3-215ENST00000555964 A0A0G2JMZ2 1700 aa20.5■□□□□ 0.87
XRCC3-215ENST00000555964 STRNO43815 780 aa20.5■□□□□ 0.87
XRCC3-215ENST00000555964 IFIT2P09913 472 aaKnown RBP20.5■□□□□ 0.87
XRCC3-215ENST00000555964 CNGA1P29973 690 aa20.5■□□□□ 0.87
XRCC3-215ENST00000555964 SEPT2Q15019 361 aa20.5■□□□□ 0.87
XRCC3-215ENST00000555964 TMEM179Q6ZVK1 233 aa20.5■□□□□ 0.87
XRCC3-215ENST00000555964 DPP9Q86TI2 863 aa20.5■□□□□ 0.87
XRCC3-215ENST00000555964 AMOTL1Q8IY63 956 aa20.5■□□□□ 0.87
XRCC3-215ENST00000555964 TANGO6Q9C0B7 1094 aa20.5■□□□□ 0.87
XRCC3-215ENST00000555964 IL1RAPL2Q9NP60 686 aa20.5■□□□□ 0.87
XRCC3-215ENST00000555964 BTBD7Q9P203 1132 aa20.5■□□□□ 0.87
XRCC3-215ENST00000555964 DNM1LO00429 736 aa20.49■□□□□ 0.87
XRCC3-215ENST00000555964 LRRC26Q2I0M4 334 aa20.49■□□□□ 0.87
XRCC3-215ENST00000555964 DEFB123Q8N688 67 aa20.49■□□□□ 0.87
XRCC3-215ENST00000555964 SHCBP1Q8NEM2 672 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms