RNA–Protein interactions for RNA: ENST00000555752.1

SUPT16H-203, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 888 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-203ENST00000555752 TNNQ9UQP3 1299 aa23.28■■□□□ 1.32
SUPT16H-203ENST00000555752 SLC15A5A6NIM6 579 aa23.27■■□□□ 1.32
SUPT16H-203ENST00000555752 USP17L15C9J2P7 530 aa23.27■■□□□ 1.32
SUPT16H-203ENST00000555752 USP17L13C9JLJ4 530 aa23.27■■□□□ 1.32
SUPT16H-203ENST00000555752 USP17L11C9JVI0 530 aa23.27■■□□□ 1.32
SUPT16H-203ENST00000555752 USP17L18D6R9N7 530 aa23.27■■□□□ 1.32
SUPT16H-203ENST00000555752 USP17L22D6RA61 530 aa23.27■■□□□ 1.32
SUPT16H-203ENST00000555752 USP17L17D6RBQ6 530 aa23.27■■□□□ 1.32
SUPT16H-203ENST00000555752 USP17L19D6RCP7 530 aa23.27■■□□□ 1.32
SUPT16H-203ENST00000555752 USP17L20D6RJB6 530 aa23.27■■□□□ 1.32
SUPT16H-203ENST00000555752 USP17L24Q0WX57 530 aa23.27■■□□□ 1.32
SUPT16H-203ENST00000555752 SHHQ15465 462 aa23.27■■□□□ 1.32
SUPT16H-203ENST00000555752 TTC39AQ5SRH9 613 aa23.27■■□□□ 1.32
SUPT16H-203ENST00000555752 LPAR1Q92633 364 aa23.27■■□□□ 1.32
SUPT16H-203ENST00000555752 C12orf42Q96LP6 360 aa23.27■■□□□ 1.32
SUPT16H-203ENST00000555752 CDX2Q99626 313 aaPredicted RBP23.27■■□□□ 1.32
SUPT16H-203ENST00000555752 FEZ1Q99689 392 aa23.27■■□□□ 1.32
SUPT16H-203ENST00000555752 CDH23Q9H251 3354 aa23.27■■□□□ 1.32
SUPT16H-203ENST00000555752 CCNA1P78396 465 aa23.26■■□□□ 1.31
SUPT16H-203ENST00000555752 ATP2B2Q01814 1243 aa23.26■■□□□ 1.31
SUPT16H-203ENST00000555752 C9orf50Q5SZB4 431 aa23.26■■□□□ 1.31
SUPT16H-203ENST00000555752 GJC2Q5T442 439 aaPredicted RBP23.26■■□□□ 1.31
SUPT16H-203ENST00000555752 CATSPERGQ6ZRH7 1159 aa23.26■■□□□ 1.31
SUPT16H-203ENST00000555752 ACER1Q8TDN7 264 aa23.26■■□□□ 1.31
SUPT16H-203ENST00000555752 ATP11BQ9Y2G3 1177 aa23.26■■□□□ 1.31
SUPT16H-203ENST00000555752 PRUNE2Q8WUY3 3088 aa23.26■■□□□ 1.31
SUPT16H-203ENST00000555752 MYH1P12882 1939 aa23.25■■□□□ 1.31
SUPT16H-203ENST00000555752 DNM1LO00429 736 aa23.25■■□□□ 1.31
SUPT16H-203ENST00000555752 GLRX3O76003 335 aaKnown RBP23.25■■□□□ 1.31
SUPT16H-203ENST00000555752 HLA-DOAP06340 250 aa23.25■■□□□ 1.31
SUPT16H-203ENST00000555752 ZAP70P43403 619 aa23.25■■□□□ 1.31
SUPT16H-203ENST00000555752 RARSP54136 660 aaKnown RBP23.25■■□□□ 1.31
SUPT16H-203ENST00000555752 ANO1Q5XXA6 986 aa23.25■■□□□ 1.31
SUPT16H-203ENST00000555752 RLFQ13129 1914 aa23.25■■□□□ 1.31
SUPT16H-203ENST00000555752 ZNF316A6NFI3 1004 aaPredicted RBP23.24■■□□□ 1.31
SUPT16H-203ENST00000555752 VCAM1P19320 739 aa23.24■■□□□ 1.31
SUPT16H-203ENST00000555752 GRB14Q14449 540 aa23.24■■□□□ 1.31
SUPT16H-203ENST00000555752 RAB3GAP1Q15042 981 aa23.24■■□□□ 1.31
SUPT16H-203ENST00000555752 TNNI3KQ59H18 835 aa23.24■■□□□ 1.31
SUPT16H-203ENST00000555752 TATDN1Q6P1N9 297 aa23.24■■□□□ 1.31
SUPT16H-203ENST00000555752 PRKAG2Q9UGJ0 569 aa23.24■■□□□ 1.31
SUPT16H-203ENST00000555752 FPGT-TNNI3KV9GXZ4 949 aa23.24■■□□□ 1.31
SUPT16H-203ENST00000555752 SPTBN5Q9NRC6 3674 aaKnown RBP23.24■■□□□ 1.31
SUPT16H-203ENST00000555752 IGHA2P01877 340 aa23.23■■□□□ 1.31
SUPT16H-203ENST00000555752 GNAI2P04899 355 aa23.23■■□□□ 1.31
SUPT16H-203ENST00000555752 HOXC6P09630 235 aa23.23■■□□□ 1.31
SUPT16H-203ENST00000555752 CT47B1P0C2W7 299 aaPredicted RBP23.23■■□□□ 1.31
SUPT16H-203ENST00000555752 MIGA1Q8NAN2 632 aa23.23■■□□□ 1.31
SUPT16H-203ENST00000555752 SEMA6BQ9H3T3 888 aa23.23■■□□□ 1.31
SUPT16H-203ENST00000555752 IVNS1ABPQ9Y6Y0 642 aa23.23■■□□□ 1.31
SUPT16H-203ENST00000555752 SPDYE16A6NNV3 312 aaPredicted RBP23.22■■□□□ 1.31
SUPT16H-203ENST00000555752 MSCO60682 206 aa23.22■■□□□ 1.31
SUPT16H-203ENST00000555752 CYBAP13498 195 aa23.22■■□□□ 1.31
SUPT16H-203ENST00000555752 CYP7A1P22680 504 aa23.22■■□□□ 1.31
SUPT16H-203ENST00000555752 CCDC158Q5M9N0 1113 aa23.22■■□□□ 1.31
SUPT16H-203ENST00000555752 ATF7IPQ6VMQ6 1270 aa23.22■■□□□ 1.31
SUPT16H-203ENST00000555752 MAFAQ8NHW3 353 aaPredicted RBP23.22■■□□□ 1.31
SUPT16H-203ENST00000555752 ARHGAP45Q92619 1136 aa23.22■■□□□ 1.31
SUPT16H-203ENST00000555752 PRDM5Q9NQX1 630 aaPredicted RBP23.22■■□□□ 1.31
SUPT16H-203ENST00000555752 MYCNP04198 464 aaPredicted RBP23.21■■□□□ 1.31
SUPT16H-203ENST00000555752 TRIM60Q495X7 471 aa23.21■■□□□ 1.31
SUPT16H-203ENST00000555752 SLC39A5Q6ZMH5 540 aa23.21■■□□□ 1.31
SUPT16H-203ENST00000555752 MYLIPQ8WY64 445 aa23.21■■□□□ 1.31
SUPT16H-203ENST00000555752 BADQ92934 168 aa23.21■■□□□ 1.31
SUPT16H-203ENST00000555752 KIAA1683Q9H0B3 1180 aa23.21■■□□□ 1.31
SUPT16H-203ENST00000555752 TTYH1Q9H313 450 aaPredicted RBP23.21■■□□□ 1.31
SUPT16H-203ENST00000555752 RPAP3Q9H6T3 665 aaPredicted RBP23.21■■□□□ 1.31
SUPT16H-203ENST00000555752 LBX2Q6XYB7 198 aa23.2■■□□□ 1.3
SUPT16H-203ENST00000555752 SH3RF1Q7Z6J0 888 aa23.2■■□□□ 1.3
SUPT16H-203ENST00000555752 TLR7Q9NYK1 1049 aaKnown RBP23.2■■□□□ 1.3
SUPT16H-203ENST00000555752 SERPINB13Q9UIV8 391 aa23.2■■□□□ 1.3
SUPT16H-203ENST00000555752 GUCY1A2P33402 732 aa23.19■■□□□ 1.3
SUPT16H-203ENST00000555752 USP5P45974 858 aa23.19■■□□□ 1.3
SUPT16H-203ENST00000555752 USP14P54578 494 aa23.19■■□□□ 1.3
SUPT16H-203ENST00000555752 ABCB5Q2M3G0 1257 aa23.19■■□□□ 1.3
SUPT16H-203ENST00000555752 CERKLQ49MI3 558 aaPredicted RBP23.19■■□□□ 1.3
SUPT16H-203ENST00000555752 GPR108Q9NPR9 543 aa23.19■■□□□ 1.3
SUPT16H-203ENST00000555752 IDH1O75874 414 aaKnown RBP23.18■■□□□ 1.3
SUPT16H-203ENST00000555752 TRIM27P14373 513 aa23.18■■□□□ 1.3
SUPT16H-203ENST00000555752 ADORA2AP29274 412 aa23.18■■□□□ 1.3
SUPT16H-203ENST00000555752 PRAMEF19Q5SWL8 479 aa23.18■■□□□ 1.3
SUPT16H-203ENST00000555752 DPP9Q86TI2 863 aa23.18■■□□□ 1.3
SUPT16H-203ENST00000555752 CLUAP1Q96AJ1 413 aa23.18■■□□□ 1.3
SUPT16H-203ENST00000555752 MOV10L1Q9BXT6 1211 aaKnown RBP23.18■■□□□ 1.3
SUPT16H-203ENST00000555752 TRIM43BA6NCK2 446 aa23.17■■□□□ 1.3
SUPT16H-203ENST00000555752 SHMT1P34896 483 aa23.17■■□□□ 1.3
SUPT16H-203ENST00000555752 PLCD1P51178 756 aa23.17■■□□□ 1.3
SUPT16H-203ENST00000555752 EVX2Q03828 476 aa23.17■■□□□ 1.3
SUPT16H-203ENST00000555752 ARRDC4Q8NCT1 418 aa23.17■■□□□ 1.3
SUPT16H-203ENST00000555752 FERMT2Q96AC1 680 aa23.17■■□□□ 1.3
SUPT16H-203ENST00000555752 TRIM43Q96BQ3 446 aaPredicted RBP23.17■■□□□ 1.3
SUPT16H-203ENST00000555752 EHD4Q9H223 541 aa23.17■■□□□ 1.3
SUPT16H-203ENST00000555752 PDLIM7Q9NR12 457 aa23.17■■□□□ 1.3
SUPT16H-203ENST00000555752 DBNLQ9UJU6 430 aaKnown RBP23.17■■□□□ 1.3
SUPT16H-203ENST00000555752 KBTBD13C9JR72 458 aa23.16■■□□□ 1.3
SUPT16H-203ENST00000555752 COBLO75128 1261 aa23.16■■□□□ 1.3
SUPT16H-203ENST00000555752 ADCYAP1R1P41586 468 aa23.16■■□□□ 1.3
SUPT16H-203ENST00000555752 OS9Q13438 667 aaPredicted RBP23.16■■□□□ 1.3
SUPT16H-203ENST00000555752 POLA2Q14181 598 aa23.16■■□□□ 1.3
SUPT16H-203ENST00000555752 SEPT2Q15019 361 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms