RNA–Protein interactions for RNA: ENST00000555740.5

PCNX4-210, Transcript of pecanex 4, humanhuman

TSL 2

Gene PCNX4, Length 2,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-210ENST00000555740 TACC3Q9Y6A5 838 aa9.21□□□□□ -0.94
PCNX4-210ENST00000555740 CNTNAP1P78357 1384 aa9.21□□□□□ -0.94
PCNX4-210ENST00000555740 DOCK1Q14185 1865 aa9.21□□□□□ -0.94
PCNX4-210ENST00000555740 ST18O60284 1047 aa9.21□□□□□ -0.94
PCNX4-210ENST00000555740 GABPAQ06546 454 aa9.21□□□□□ -0.94
PCNX4-210ENST00000555740 DLGAP5Q15398 846 aa9.21□□□□□ -0.94
PCNX4-210ENST00000555740 BLOC1S2Q6QNY1 142 aa9.21□□□□□ -0.94
PCNX4-210ENST00000555740 FAM83AQ86UY5 434 aa9.21□□□□□ -0.94
PCNX4-210ENST00000555740 TGFBRAP1Q8WUH2 860 aa9.21□□□□□ -0.94
PCNX4-210ENST00000555740 CALR3Q96L12 384 aaKnown RBP9.21□□□□□ -0.94
PCNX4-210ENST00000555740 KRT23Q9C075 422 aa9.21□□□□□ -0.94
PCNX4-210ENST00000555740 GPRC5DQ9NZD1 345 aa9.21□□□□□ -0.94
PCNX4-210ENST00000555740 GPR37L1O60883 481 aa9.2□□□□□ -0.94
PCNX4-210ENST00000555740 SLC3A2P08195 630 aaKnown RBP9.2□□□□□ -0.94
PCNX4-210ENST00000555740 CASTP20810 708 aaKnown RBP9.2□□□□□ -0.94
PCNX4-210ENST00000555740 PPP2R2DQ66LE6 453 aa9.2□□□□□ -0.94
PCNX4-210ENST00000555740 C16orf86Q6ZW13 317 aa9.2□□□□□ -0.94
PCNX4-210ENST00000555740 AMOTL1Q8IY63 956 aa9.2□□□□□ -0.94
PCNX4-210ENST00000555740 NCOA7Q8NI08 942 aa9.2□□□□□ -0.94
PCNX4-210ENST00000555740 DHX36Q9H2U1 1008 aaKnown RBP9.2□□□□□ -0.94
PCNX4-210ENST00000555740 ZNF70Q9UC06 446 aaPredicted RBP9.2□□□□□ -0.94
PCNX4-210ENST00000555740 PCDHAC2Q9Y5I4 1007 aa9.2□□□□□ -0.94
PCNX4-210ENST00000555740 PITPNM2Q9BZ72 1349 aa9.2□□□□□ -0.94
PCNX4-210ENST00000555740 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.2□□□□□ -0.94
PCNX4-210ENST00000555740 USP17L12C9JPN9 530 aa9.2□□□□□ -0.94
PCNX4-210ENST00000555740 USP17L21D6R901 530 aa9.2□□□□□ -0.94
PCNX4-210ENST00000555740 EVCP57679 992 aa9.2□□□□□ -0.94
PCNX4-210ENST00000555740 ANTXR2P58335 489 aa9.2□□□□□ -0.94
PCNX4-210ENST00000555740 GPR162Q16538 588 aa9.2□□□□□ -0.94
PCNX4-210ENST00000555740 DHX32Q7L7V1 743 aaKnown RBP9.2□□□□□ -0.94
PCNX4-210ENST00000555740 MAPKAPK5Q8IW41 473 aa9.2□□□□□ -0.94
PCNX4-210ENST00000555740 PRMT6Q96LA8 375 aaPredicted RBP9.2□□□□□ -0.94
PCNX4-210ENST00000555740 MCM9Q9NXL9 1143 aa9.2□□□□□ -0.94
PCNX4-210ENST00000555740 OTOFQ9HC10 1997 aa9.19□□□□□ -0.94
PCNX4-210ENST00000555740 POTEJP0CG39 1038 aa9.19□□□□□ -0.94
PCNX4-210ENST00000555740 CYP2D6P10635 497 aa9.19□□□□□ -0.94
PCNX4-210ENST00000555740 C7P10643 843 aa9.19□□□□□ -0.94
PCNX4-210ENST00000555740 HAND2P61296 217 aa9.19□□□□□ -0.94
PCNX4-210ENST00000555740 BECN1Q14457 450 aa9.19□□□□□ -0.94
PCNX4-210ENST00000555740 ANKRD1Q15327 319 aa9.19□□□□□ -0.94
PCNX4-210ENST00000555740 TMOD2Q9NZR1 351 aa9.19□□□□□ -0.94
PCNX4-210ENST00000555740 SWAP70Q9UH65 585 aa9.19□□□□□ -0.94
PCNX4-210ENST00000555740 PGAP2Q9UHJ9 254 aa9.19□□□□□ -0.94
PCNX4-210ENST00000555740 WNT10BO00744 389 aa9.19□□□□□ -0.94
PCNX4-210ENST00000555740 CD2BP2O95400 341 aaKnown RBP9.19□□□□□ -0.94
PCNX4-210ENST00000555740 CTDSPL2Q05D32 466 aa9.19□□□□□ -0.94
PCNX4-210ENST00000555740 NFIAQ12857 509 aa9.19□□□□□ -0.94
PCNX4-210ENST00000555740 KIF4BQ2VIQ3 1234 aa9.19□□□□□ -0.94
PCNX4-210ENST00000555740 PROX2Q3B8N5 592 aa9.19□□□□□ -0.94
PCNX4-210ENST00000555740 MFSD6Q6ZSS7 791 aa9.19□□□□□ -0.94
PCNX4-210ENST00000555740 TTC6Q86TZ1 520 aa9.19□□□□□ -0.94
PCNX4-210ENST00000555740 RBM46Q8TBY0 533 aaKnown RBP9.19□□□□□ -0.94
PCNX4-210ENST00000555740 PDRG1Q9NUG6 133 aa9.19□□□□□ -0.94
PCNX4-210ENST00000555740 K7ELQ4 463 aaPredicted RBP9.18□□□□□ -0.94
PCNX4-210ENST00000555740 MCM5P33992 734 aa9.18□□□□□ -0.94
PCNX4-210ENST00000555740 NEK4P51957 841 aa9.18□□□□□ -0.94
PCNX4-210ENST00000555740 COL9A3Q14050 684 aaPredicted RBP9.18□□□□□ -0.94
PCNX4-210ENST00000555740 TOB2Q14106 344 aaPredicted RBP9.18□□□□□ -0.94
PCNX4-210ENST00000555740 RALYLQ86SE5 291 aaKnown RBP9.18□□□□□ -0.94
PCNX4-210ENST00000555740 HSCBQ8IWL3 235 aa9.18□□□□□ -0.94
PCNX4-210ENST00000555740 FAM151AQ8WW52 585 aa9.18□□□□□ -0.94
PCNX4-210ENST00000555740 TMEM87BQ96K49 555 aa9.18□□□□□ -0.94
PCNX4-210ENST00000555740 IPO9Q96P70 1041 aaKnown RBP9.18□□□□□ -0.94
PCNX4-210ENST00000555740 UPF3BQ9BZI7 483 aaKnown RBP9.18□□□□□ -0.94
PCNX4-210ENST00000555740 TDRD3Q9H7E2 651 aaKnown RBP9.18□□□□□ -0.94
PCNX4-210ENST00000555740 CNOT7Q9UIV1 285 aaKnown RBP9.18□□□□□ -0.94
PCNX4-210ENST00000555740 PPP2R3BQ9Y5P8 575 aa9.18□□□□□ -0.94
PCNX4-210ENST00000555740 MYH4Q9Y623 1939 aa9.18□□□□□ -0.94
PCNX4-210ENST00000555740 CYP2D7A0A087X1C5 515 aa9.17□□□□□ -0.94
PCNX4-210ENST00000555740 SHTN1A0MZ66 631 aa9.17□□□□□ -0.94
PCNX4-210ENST00000555740 SH2B2O14492 632 aaPredicted RBP9.17□□□□□ -0.94
PCNX4-210ENST00000555740 MYO1BO43795 1136 aa9.17□□□□□ -0.94
PCNX4-210ENST00000555740 HOXB3P14651 431 aaPredicted RBP9.17□□□□□ -0.94
PCNX4-210ENST00000555740 NOVP48745 357 aa9.17□□□□□ -0.94
PCNX4-210ENST00000555740 RBM5P52756 815 aaKnown RBP eCLIP9.17□□□□□ -0.94
PCNX4-210ENST00000555740 RCAN1P53805 252 aa9.17□□□□□ -0.94
PCNX4-210ENST00000555740 PDE4BQ07343 736 aa9.17□□□□□ -0.94
PCNX4-210ENST00000555740 TRDNQ13061 729 aa9.17□□□□□ -0.94
PCNX4-210ENST00000555740 SH3BP5LQ7L8J4 393 aa9.17□□□□□ -0.94
PCNX4-210ENST00000555740 EPS8L1Q8TE68 723 aa9.17□□□□□ -0.94
PCNX4-210ENST00000555740 ZNF287Q9HBT7 754 aa9.17□□□□□ -0.94
PCNX4-210ENST00000555740 LHX6Q9UPM6 363 aa9.17□□□□□ -0.94
PCNX4-210ENST00000555740 GJA3Q9Y6H8 435 aa9.17□□□□□ -0.94
PCNX4-210ENST00000555740 H7C1D1 291 aa9.17□□□□□ -0.94
PCNX4-210ENST00000555740 HLA-DOAP06340 250 aa9.17□□□□□ -0.94
PCNX4-210ENST00000555740 AK2P54819 239 aa9.17□□□□□ -0.94
PCNX4-210ENST00000555740 MAP3K10Q02779 954 aa9.17□□□□□ -0.94
PCNX4-210ENST00000555740 CUL4AQ13619 759 aa9.17□□□□□ -0.94
PCNX4-210ENST00000555740 TNFAIP1Q13829 316 aa9.17□□□□□ -0.94
PCNX4-210ENST00000555740 APOBEC3FQ8IUX4 373 aaKnown RBP9.17□□□□□ -0.94
PCNX4-210ENST00000555740 ESR2Q92731 530 aa9.17□□□□□ -0.94
PCNX4-210ENST00000555740 TRAIPQ9BWF2 469 aa9.17□□□□□ -0.94
PCNX4-210ENST00000555740 ADARB2Q9NS39 739 aaKnown RBP9.17□□□□□ -0.94
PCNX4-210ENST00000555740 TCP11L1Q9NUJ3 509 aa9.17□□□□□ -0.94
PCNX4-210ENST00000555740 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.17□□□□□ -0.94
PCNX4-210ENST00000555740 SSC5DA1L4H1 1573 aa9.17□□□□□ -0.94
PCNX4-210ENST00000555740 PHIPQ8WWQ0 1821 aa9.17□□□□□ -0.94
PCNX4-210ENST00000555740 GLTPD2A6NH11 291 aa9.16□□□□□ -0.94
PCNX4-210ENST00000555740 MINDY4BA8MYZ0 360 aa9.16□□□□□ -0.94
PCNX4-210ENST00000555740 PRC1O43663 620 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms