RNA–Protein interactions for RNA: ENST00000555585.5

HNRNPC-220, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 682 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-220ENST00000555585 DDIT3P35638 169 aa11.29□□□□□ -0.6
HNRNPC-220ENST00000555585 EPS15P42566 896 aa11.29□□□□□ -0.6
HNRNPC-220ENST00000555585 TNFAIP1Q13829 316 aa11.29□□□□□ -0.6
HNRNPC-220ENST00000555585 CATIPQ7Z7H3 387 aa11.29□□□□□ -0.6
HNRNPC-220ENST00000555585 ZNF654Q8IZM8 581 aa11.29□□□□□ -0.6
HNRNPC-220ENST00000555585 TRPM4Q8TD43 1214 aa11.29□□□□□ -0.6
HNRNPC-220ENST00000555585 CCDC17Q96LX7 622 aa11.29□□□□□ -0.6
HNRNPC-220ENST00000555585 LLPHQ9BRT6 129 aaKnown RBP11.29□□□□□ -0.6
HNRNPC-220ENST00000555585 TMEM39BQ9GZU3 492 aa11.29□□□□□ -0.6
HNRNPC-220ENST00000555585 KAT14Q9H8E8 782 aa11.29□□□□□ -0.6
HNRNPC-220ENST00000555585 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.29□□□□□ -0.6
HNRNPC-220ENST00000555585 IL17RBQ9NRM6 502 aa11.29□□□□□ -0.6
HNRNPC-220ENST00000555585 HPS5Q9UPZ3 1129 aa11.29□□□□□ -0.6
HNRNPC-220ENST00000555585 AKR1B1P15121 316 aa11.28□□□□□ -0.6
HNRNPC-220ENST00000555585 NUCB2P80303 420 aa11.28□□□□□ -0.6
HNRNPC-220ENST00000555585 RASA3Q14644 834 aa11.28□□□□□ -0.6
HNRNPC-220ENST00000555585 CERKLQ49MI3 558 aaPredicted RBP11.28□□□□□ -0.6
HNRNPC-220ENST00000555585 CPLX2Q6PUV4 134 aaKnown RBP11.28□□□□□ -0.6
HNRNPC-220ENST00000555585 DGKHQ86XP1 1220 aa11.28□□□□□ -0.6
HNRNPC-220ENST00000555585 FAM184AQ8NB25 1140 aa11.28□□□□□ -0.6
HNRNPC-220ENST00000555585 DDX11Q96FC9 970 aa11.28□□□□□ -0.6
HNRNPC-220ENST00000555585 TSPYL2Q9H2G4 693 aaPredicted RBP11.28□□□□□ -0.6
HNRNPC-220ENST00000555585 DNAJC18Q9H819 358 aa11.28□□□□□ -0.6
HNRNPC-220ENST00000555585 ADARB2Q9NS39 739 aaKnown RBP11.28□□□□□ -0.6
HNRNPC-220ENST00000555585 TAOK2Q9UL54 1235 aa11.28□□□□□ -0.6
HNRNPC-220ENST00000555585 STX8Q9UNK0 236 aa11.28□□□□□ -0.6
HNRNPC-220ENST00000555585 SCAF8Q9UPN6 1271 aaKnown RBP11.28□□□□□ -0.6
HNRNPC-220ENST00000555585 ASTN2O75129 1339 aaPredicted RBP11.28□□□□□ -0.6
HNRNPC-220ENST00000555585 PTPDC1A2A3K4 754 aa11.27□□□□□ -0.61
HNRNPC-220ENST00000555585 JAK2O60674 1132 aa11.27□□□□□ -0.61
HNRNPC-220ENST00000555585 DDAH1O94760 285 aa11.27□□□□□ -0.61
HNRNPC-220ENST00000555585 CALM1P0DP23 149 aa11.27□□□□□ -0.61
HNRNPC-220ENST00000555585 CALM2P0DP24 149 aa11.27□□□□□ -0.61
HNRNPC-220ENST00000555585 CALM3P0DP25 149 aa11.27□□□□□ -0.61
HNRNPC-220ENST00000555585 ADD1P35611 737 aaKnown RBP11.27□□□□□ -0.61
HNRNPC-220ENST00000555585 HMGN5P82970 282 aaKnown RBP11.27□□□□□ -0.61
HNRNPC-220ENST00000555585 RTN1Q16799 776 aa11.27□□□□□ -0.61
HNRNPC-220ENST00000555585 ANGEL2Q5VTE6 544 aaKnown RBP11.27□□□□□ -0.61
HNRNPC-220ENST00000555585 RCSD1Q6JBY9 416 aa11.27□□□□□ -0.61
HNRNPC-220ENST00000555585 TATDN1Q6P1N9 297 aa11.27□□□□□ -0.61
HNRNPC-220ENST00000555585 METTL16Q86W50 562 aaKnown RBP11.27□□□□□ -0.61
HNRNPC-220ENST00000555585 APOBEC3FQ8IUX4 373 aaKnown RBP11.27□□□□□ -0.61
HNRNPC-220ENST00000555585 NSUN7Q8NE18 718 aaKnown RBP11.27□□□□□ -0.61
HNRNPC-220ENST00000555585 ANKS1AQ92625 1134 aa11.27□□□□□ -0.61
HNRNPC-220ENST00000555585 HERC5Q9UII4 1024 aaKnown RBP11.27□□□□□ -0.61
HNRNPC-220ENST00000555585 PLIN4Q96Q06 1357 aa11.27□□□□□ -0.61
HNRNPC-220ENST00000555585 CCDC196A0A1B0GTZ2 297 aa11.26□□□□□ -0.61
HNRNPC-220ENST00000555585 CDKL5O76039 1030 aa11.26□□□□□ -0.61
HNRNPC-220ENST00000555585 GDF11O95390 407 aa11.26□□□□□ -0.61
HNRNPC-220ENST00000555585 CTDNEP1O95476 244 aa11.26□□□□□ -0.61
HNRNPC-220ENST00000555585 CDC27P30260 824 aa11.26□□□□□ -0.61
HNRNPC-220ENST00000555585 RCAN1P53805 252 aa11.26□□□□□ -0.61
HNRNPC-220ENST00000555585 ATP2B2Q01814 1243 aa11.26□□□□□ -0.61
HNRNPC-220ENST00000555585 ABCB5Q2M3G0 1257 aa11.26□□□□□ -0.61
HNRNPC-220ENST00000555585 PPP4R3BQ5MIZ7 849 aa11.26□□□□□ -0.61
HNRNPC-220ENST00000555585 FOXD4L5Q5VV16 416 aaPredicted RBP11.26□□□□□ -0.61
HNRNPC-220ENST00000555585 LARP1BQ659C4 914 aaKnown RBP11.26□□□□□ -0.61
HNRNPC-220ENST00000555585 PLCD3Q8N3E9 789 aa11.26□□□□□ -0.61
HNRNPC-220ENST00000555585 FANCBQ8NB91 859 aa11.26□□□□□ -0.61
HNRNPC-220ENST00000555585 PNMA1Q8ND90 353 aa11.26□□□□□ -0.61
HNRNPC-220ENST00000555585 SMARCC2Q8TAQ2 1214 aa11.26□□□□□ -0.61
HNRNPC-220ENST00000555585 FOXD4L4Q8WXT5 416 aaPredicted RBP11.26□□□□□ -0.61
HNRNPC-220ENST00000555585 CEP95Q96GE4 821 aa11.26□□□□□ -0.61
HNRNPC-220ENST00000555585 TMEM47Q9BQJ4 181 aa11.26□□□□□ -0.61
HNRNPC-220ENST00000555585 CABP5Q9NP86 173 aa11.26□□□□□ -0.61
HNRNPC-220ENST00000555585 GGA3Q9NZ52 723 aa11.26□□□□□ -0.61
HNRNPC-220ENST00000555585 MTMR7Q9Y216 660 aa11.26□□□□□ -0.61
HNRNPC-220ENST00000555585 KIF3AQ9Y496 699 aa11.26□□□□□ -0.61
HNRNPC-220ENST00000555585 ZC3H4Q9UPT8 1303 aaKnown RBP11.26□□□□□ -0.61
HNRNPC-220ENST00000555585 IGKV6D-41A0A0C4DH26 115 aa11.25□□□□□ -0.61
HNRNPC-220ENST00000555585 GLTPD2A6NH11 291 aa11.25□□□□□ -0.61
HNRNPC-220ENST00000555585 TBC1D12O60347 775 aa11.25□□□□□ -0.61
HNRNPC-220ENST00000555585 PPFIA3O75145 1194 aa11.25□□□□□ -0.61
HNRNPC-220ENST00000555585 TOP1P11387 765 aaKnown RBP11.25□□□□□ -0.61
HNRNPC-220ENST00000555585 PDCP20941 246 aa11.25□□□□□ -0.61
HNRNPC-220ENST00000555585 FOSBP53539 338 aa11.25□□□□□ -0.61
HNRNPC-220ENST00000555585 HIRAP54198 1017 aaPredicted RBP11.25□□□□□ -0.61
HNRNPC-220ENST00000555585 PPP2R5BQ15173 497 aa11.25□□□□□ -0.61
HNRNPC-220ENST00000555585 MIGA2Q7L4E1 593 aa11.25□□□□□ -0.61
HNRNPC-220ENST00000555585 CDAN1Q8IWY9 1227 aa11.25□□□□□ -0.61
HNRNPC-220ENST00000555585 CTCFLQ8NI51 663 aaPredicted RBP11.25□□□□□ -0.61
HNRNPC-220ENST00000555585 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.25□□□□□ -0.61
HNRNPC-220ENST00000555585 DEFB129Q9H1M3 183 aa11.25□□□□□ -0.61
HNRNPC-220ENST00000555585 RBM28Q9NW13 759 aaKnown RBP11.25□□□□□ -0.61
HNRNPC-220ENST00000555585 MTMR4Q9NYA4 1195 aa11.25□□□□□ -0.61
HNRNPC-220ENST00000555585 ORC3Q9UBD5 711 aaPredicted RBP11.25□□□□□ -0.61
HNRNPC-220ENST00000555585 CLIP2Q9UDT6 1046 aa11.25□□□□□ -0.61
HNRNPC-220ENST00000555585 NID2Q14112 1375 aa11.25□□□□□ -0.61
HNRNPC-220ENST00000555585 GOLGB1Q14789 3259 aaKnown RBP11.25□□□□□ -0.61
HNRNPC-220ENST00000555585 GREB1LQ9C091 1923 aaPredicted RBP11.25□□□□□ -0.61
HNRNPC-220ENST00000555585 MYH4Q9Y623 1939 aa11.25□□□□□ -0.61
HNRNPC-220ENST00000555585 VPS37CA5D8V6 355 aaPredicted RBP11.24□□□□□ -0.61
HNRNPC-220ENST00000555585 STX6O43752 255 aa11.24□□□□□ -0.61
HNRNPC-220ENST00000555585 TTLL1O95922 423 aa11.24□□□□□ -0.61
HNRNPC-220ENST00000555585 SYT1P21579 422 aa11.24□□□□□ -0.61
HNRNPC-220ENST00000555585 KIF5BP33176 963 aa11.24□□□□□ -0.61
HNRNPC-220ENST00000555585 SSRP1Q08945 709 aaKnown RBP11.24□□□□□ -0.61
HNRNPC-220ENST00000555585 TROAPQ12815 778 aa11.24□□□□□ -0.61
HNRNPC-220ENST00000555585 PKP1Q13835 747 aa11.24□□□□□ -0.61
HNRNPC-220ENST00000555585 SEPT2Q15019 361 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms