RNA–Protein interactions for RNA: ENST00000555569.1

PCNX4-209, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 515 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-209ENST00000555569 MPHOSPH10O00566 681 aaKnown RBP16.63■□□□□ 0.25
PCNX4-209ENST00000555569 ELNP15502 786 aa16.63■□□□□ 0.25
PCNX4-209ENST00000555569 SEPT2Q15019 361 aa16.63■□□□□ 0.25
PCNX4-209ENST00000555569 TSHZ3Q63HK5 1081 aa16.63■□□□□ 0.25
PCNX4-209ENST00000555569 SLC44A5Q8NCS7 719 aa16.63■□□□□ 0.25
PCNX4-209ENST00000555569 GTF3C2Q8WUA4 911 aaPredicted RBP16.63■□□□□ 0.25
PCNX4-209ENST00000555569 DDRGK1Q96HY6 314 aa16.63■□□□□ 0.25
PCNX4-209ENST00000555569 RNF208Q9H0X6 261 aa16.63■□□□□ 0.25
PCNX4-209ENST00000555569 TXNRD2Q9NNW7 524 aa16.63■□□□□ 0.25
PCNX4-209ENST00000555569 USP17L15C9J2P7 530 aa16.62■□□□□ 0.25
PCNX4-209ENST00000555569 USP17L13C9JLJ4 530 aa16.62■□□□□ 0.25
PCNX4-209ENST00000555569 USP17L11C9JVI0 530 aa16.62■□□□□ 0.25
PCNX4-209ENST00000555569 USP17L18D6R9N7 530 aa16.62■□□□□ 0.25
PCNX4-209ENST00000555569 USP17L22D6RA61 530 aa16.62■□□□□ 0.25
PCNX4-209ENST00000555569 USP17L17D6RBQ6 530 aa16.62■□□□□ 0.25
PCNX4-209ENST00000555569 USP17L19D6RCP7 530 aa16.62■□□□□ 0.25
PCNX4-209ENST00000555569 USP17L20D6RJB6 530 aa16.62■□□□□ 0.25
PCNX4-209ENST00000555569 INHAP05111 366 aa16.62■□□□□ 0.25
PCNX4-209ENST00000555569 GJB1P08034 283 aa16.62■□□□□ 0.25
PCNX4-209ENST00000555569 USP17L24Q0WX57 530 aa16.62■□□□□ 0.25
PCNX4-209ENST00000555569 AMOTL1Q8IY63 956 aa16.62■□□□□ 0.25
PCNX4-209ENST00000555569 KBTBD3Q8NAB2 608 aa16.62■□□□□ 0.25
PCNX4-209ENST00000555569 GPRC5AQ8NFJ5 357 aa16.62■□□□□ 0.25
PCNX4-209ENST00000555569 NKX2-3Q8TAU0 364 aa16.62■□□□□ 0.25
PCNX4-209ENST00000555569 DYNLL2Q96FJ2 89 aa16.62■□□□□ 0.25
PCNX4-209ENST00000555569 YTHDC1Q96MU7 727 aaKnown RBP16.62■□□□□ 0.25
PCNX4-209ENST00000555569 CRBNQ96SW2 442 aa16.62■□□□□ 0.25
PCNX4-209ENST00000555569 PUS7LQ9H0K6 701 aaKnown RBP16.62■□□□□ 0.25
PCNX4-209ENST00000555569 RBPJLQ9UBG7 517 aa16.62■□□□□ 0.25
PCNX4-209ENST00000555569 SLC4A4Q9Y6R1 1079 aa16.62■□□□□ 0.25
PCNX4-209ENST00000555569 USP17L12C9JPN9 530 aa16.61■□□□□ 0.25
PCNX4-209ENST00000555569 USP17L21D6R901 530 aa16.61■□□□□ 0.25
PCNX4-209ENST00000555569 PEX10O60683 326 aa16.61■□□□□ 0.25
PCNX4-209ENST00000555569 GJA8P48165 433 aa16.61■□□□□ 0.25
PCNX4-209ENST00000555569 C12orf60Q5U649 245 aa16.61■□□□□ 0.25
PCNX4-209ENST00000555569 TMEM179Q6ZVK1 233 aa16.61■□□□□ 0.25
PCNX4-209ENST00000555569 SHISA4Q96DD7 197 aa16.61■□□□□ 0.25
PCNX4-209ENST00000555569 PAGR1Q9BTK6 254 aa16.61■□□□□ 0.25
PCNX4-209ENST00000555569 UNC93B1Q9H1C4 597 aa16.61■□□□□ 0.25
PCNX4-209ENST00000555569 GJD2Q9UKL4 321 aa16.61■□□□□ 0.25
PCNX4-209ENST00000555569 CYP2D7A0A087X1C5 515 aa16.6■□□□□ 0.25
PCNX4-209ENST00000555569 VCAM1P19320 739 aa16.6■□□□□ 0.25
PCNX4-209ENST00000555569 ERVK-9P63128 1117 aa16.6■□□□□ 0.25
PCNX4-209ENST00000555569 ERVK-24P63145 666 aa16.6■□□□□ 0.25
PCNX4-209ENST00000555569 CATSPERGQ6ZRH7 1159 aa16.6■□□□□ 0.25
PCNX4-209ENST00000555569 TTC41PQ6P2S7 1318 aa16.6■□□□□ 0.25
PCNX4-209ENST00000555569 SMIM22K7EJ46 135 aa16.59■□□□□ 0.25
PCNX4-209ENST00000555569 ERC2O15083 957 aa16.59■□□□□ 0.25
PCNX4-209ENST00000555569 RNF113AO15541 343 aaKnown RBP16.59■□□□□ 0.25
PCNX4-209ENST00000555569 ZFYP08048 801 aaPredicted RBP16.59■□□□□ 0.25
PCNX4-209ENST00000555569 MAPK4P31152 587 aa16.59■□□□□ 0.25
PCNX4-209ENST00000555569 CDK8P49336 464 aa16.59■□□□□ 0.25
PCNX4-209ENST00000555569 Q3C1V9 767 aa16.59■□□□□ 0.25
PCNX4-209ENST00000555569 POTEEQ6S8J3 1075 aa16.59■□□□□ 0.25
PCNX4-209ENST00000555569 C16orf86Q6ZW13 317 aa16.59■□□□□ 0.25
PCNX4-209ENST00000555569 APPBP2Q92624 585 aa16.59■□□□□ 0.25
PCNX4-209ENST00000555569 CCDC17Q96LX7 622 aa16.59■□□□□ 0.25
PCNX4-209ENST00000555569 STRBPQ96SI9 672 aaKnown RBP16.59■□□□□ 0.25
PCNX4-209ENST00000555569 RABGAP1Q9Y3P9 1069 aa16.59■□□□□ 0.25
PCNX4-209ENST00000555569 A0A1W2PRG0 241 aa16.58■□□□□ 0.24
PCNX4-209ENST00000555569 AKR1B1P15121 316 aa16.58■□□□□ 0.24
PCNX4-209ENST00000555569 CTR9Q6PD62 1173 aa16.58■□□□□ 0.24
PCNX4-209ENST00000555569 POTEHQ6S545 545 aa16.58■□□□□ 0.24
PCNX4-209ENST00000555569 CCAR1Q8IX12 1150 aaKnown RBP16.58■□□□□ 0.24
PCNX4-209ENST00000555569 U2AF1L4Q8WU68 220 aaKnown RBP16.58■□□□□ 0.24
PCNX4-209ENST00000555569 OSBP2Q969R2 916 aa16.58■□□□□ 0.24
PCNX4-209ENST00000555569 NUDT12Q9BQG2 462 aa16.58■□□□□ 0.24
PCNX4-209ENST00000555569 RPAP3Q9H6T3 665 aaPredicted RBP16.58■□□□□ 0.24
PCNX4-209ENST00000555569 ARPP21Q9UBL0 812 aaPredicted RBP16.58■□□□□ 0.24
PCNX4-209ENST00000555569 CEP290O15078 2479 aa16.57■□□□□ 0.24
PCNX4-209ENST00000555569 CNMDO75829 334 aa16.57■□□□□ 0.24
PCNX4-209ENST00000555569 GLRX3O76003 335 aaKnown RBP16.57■□□□□ 0.24
PCNX4-209ENST00000555569 SGPL1O95470 568 aa16.57■□□□□ 0.24
PCNX4-209ENST00000555569 HMGCRP04035 888 aa16.57■□□□□ 0.24
PCNX4-209ENST00000555569 LRRFIP1Q32MZ4 808 aaKnown RBP16.57■□□□□ 0.24
PCNX4-209ENST00000555569 LBX2Q6XYB7 198 aa16.57■□□□□ 0.24
PCNX4-209ENST00000555569 PI4K2BQ8TCG2 481 aa16.57■□□□□ 0.24
PCNX4-209ENST00000555569 OTUD7AQ8TE49 926 aaPredicted RBP16.57■□□□□ 0.24
PCNX4-209ENST00000555569 SOCS4Q8WXH5 440 aa16.57■□□□□ 0.24
PCNX4-209ENST00000555569 PORCNQ9H237 461 aa16.57■□□□□ 0.24
PCNX4-209ENST00000555569 ARHGEF10LQ9HCE6 1279 aa16.57■□□□□ 0.24
PCNX4-209ENST00000555569 ZBTB47Q9UFB7 747 aaPredicted RBP16.57■□□□□ 0.24
PCNX4-209ENST00000555569 GSG1L2A8MUP6 293 aa16.56■□□□□ 0.24
PCNX4-209ENST00000555569 GPAA1O43292 621 aa16.56■□□□□ 0.24
PCNX4-209ENST00000555569 CYP2B6P20813 491 aa16.56■□□□□ 0.24
PCNX4-209ENST00000555569 CCNA1P78396 465 aa16.56■□□□□ 0.24
PCNX4-209ENST00000555569 ICA1Q05084 483 aa16.56■□□□□ 0.24
PCNX4-209ENST00000555569 SBK1Q52WX2 424 aa16.56■□□□□ 0.24
PCNX4-209ENST00000555569 GIMAP6Q6P9H5 292 aa16.56■□□□□ 0.24
PCNX4-209ENST00000555569 GPR142Q7Z601 462 aa16.56■□□□□ 0.24
PCNX4-209ENST00000555569 PLEKHH3Q7Z736 793 aa16.56■□□□□ 0.24
PCNX4-209ENST00000555569 CLEC10AQ8IUN9 316 aa16.56■□□□□ 0.24
PCNX4-209ENST00000555569 SH2D4AQ9H788 454 aa16.56■□□□□ 0.24
PCNX4-209ENST00000555569 CWC22Q9HCG8 908 aaKnown RBP16.56■□□□□ 0.24
PCNX4-209ENST00000555569 PAK6Q9NQU5 681 aaPredicted RBP16.56■□□□□ 0.24
PCNX4-209ENST00000555569 RLFQ13129 1914 aa16.56■□□□□ 0.24
PCNX4-209ENST00000555569 SPDYE16A6NNV3 312 aaPredicted RBP16.55■□□□□ 0.24
PCNX4-209ENST00000555569 XRCC5P13010 732 aaKnown RBP16.55■□□□□ 0.24
PCNX4-209ENST00000555569 CAPN2P17655 700 aa16.55■□□□□ 0.24
PCNX4-209ENST00000555569 MX1P20591 662 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms