RNA–Protein interactions for RNA: ENST00000555565.5

TDP1-212, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 524 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-212ENST00000555565 NAA16Q6N069 864 aaPredicted RBP13.22□□□□□ -0.29
TDP1-212ENST00000555565 ADGRA1Q86SQ6 560 aa13.22□□□□□ -0.29
TDP1-212ENST00000555565 METTL16Q86W50 562 aaKnown RBP13.22□□□□□ -0.29
TDP1-212ENST00000555565 TRPV1Q8NER1 839 aa13.22□□□□□ -0.29
TDP1-212ENST00000555565 LPAR1Q92633 364 aa13.22□□□□□ -0.29
TDP1-212ENST00000555565 AS3MTQ9HBK9 375 aa13.22□□□□□ -0.29
TDP1-212ENST00000555565 PIH1D3Q9NQM4 214 aaKnown RBP13.22□□□□□ -0.29
TDP1-212ENST00000555565 AATFQ9NY61 560 aaKnown RBP eCLIP13.22□□□□□ -0.29
TDP1-212ENST00000555565 HERC5Q9UII4 1024 aaKnown RBP13.22□□□□□ -0.29
TDP1-212ENST00000555565 CDK5RAP2Q96SN8 1893 aa13.21□□□□□ -0.29
TDP1-212ENST00000555565 ATAD5Q96QE3 1844 aa13.21□□□□□ -0.29
TDP1-212ENST00000555565 C19orf81C9J6K1 198 aa13.21□□□□□ -0.29
TDP1-212ENST00000555565 DNM1LO00429 736 aa13.21□□□□□ -0.29
TDP1-212ENST00000555565 RTP1P59025 263 aa13.21□□□□□ -0.29
TDP1-212ENST00000555565 PPP4CP60510 307 aa13.21□□□□□ -0.29
TDP1-212ENST00000555565 SMAD3P84022 425 aaKnown RBP13.21□□□□□ -0.29
TDP1-212ENST00000555565 MAP2K5Q13163 448 aa13.21□□□□□ -0.29
TDP1-212ENST00000555565 PDE3AQ14432 1141 aa13.21□□□□□ -0.29
TDP1-212ENST00000555565 EDC3Q96F86 508 aaKnown RBP13.21□□□□□ -0.29
TDP1-212ENST00000555565 EMILIN3Q9NT22 766 aa13.21□□□□□ -0.29
TDP1-212ENST00000555565 DDX20Q9UHI6 824 aaKnown RBP13.21□□□□□ -0.29
TDP1-212ENST00000555565 EXOC6BQ9Y2D4 811 aa13.21□□□□□ -0.29
TDP1-212ENST00000555565 SIPA1L1O43166 1804 aa13.2□□□□□ -0.3
TDP1-212ENST00000555565 FRMPD3Q5JV73 1810 aa13.2□□□□□ -0.3
TDP1-212ENST00000555565 BAG3O95817 575 aa13.2□□□□□ -0.3
TDP1-212ENST00000555565 ASNSP08243 561 aa13.2□□□□□ -0.3
TDP1-212ENST00000555565 HOXC6P09630 235 aa13.2□□□□□ -0.3
TDP1-212ENST00000555565 SYMPKQ92797 1274 aaKnown RBP13.2□□□□□ -0.3
TDP1-212ENST00000555565 NOL10Q9BSC4 688 aaKnown RBP13.2□□□□□ -0.3
TDP1-212ENST00000555565 TMOD4Q9NZQ9 345 aa13.2□□□□□ -0.3
TDP1-212ENST00000555565 PI4KBQ9UBF8 816 aa13.2□□□□□ -0.3
TDP1-212ENST00000555565 RAPGEFL1Q9UHV5 662 aa13.2□□□□□ -0.3
TDP1-212ENST00000555565 FOCADQ5VW36 1801 aa13.2□□□□□ -0.3
TDP1-212ENST00000555565 USP17L10C9JJH3 530 aa13.19□□□□□ -0.3
TDP1-212ENST00000555565 IGSF3O75054 1194 aa13.19□□□□□ -0.3
TDP1-212ENST00000555565 PLCG2P16885 1265 aa13.19□□□□□ -0.3
TDP1-212ENST00000555565 PTPREP23469 700 aa13.19□□□□□ -0.3
TDP1-212ENST00000555565 SNX17Q15036 470 aa13.19□□□□□ -0.3
TDP1-212ENST00000555565 SLC39A5Q6ZMH5 540 aa13.19□□□□□ -0.3
TDP1-212ENST00000555565 SH3RF1Q7Z6J0 888 aa13.19□□□□□ -0.3
TDP1-212ENST00000555565 MAPKAPK5Q8IW41 473 aa13.19□□□□□ -0.3
TDP1-212ENST00000555565 USP38Q8NB14 1042 aa13.19□□□□□ -0.3
TDP1-212ENST00000555565 NPLOC4Q8TAT6 608 aa13.19□□□□□ -0.3
TDP1-212ENST00000555565 TGFBRAP1Q8WUH2 860 aa13.19□□□□□ -0.3
TDP1-212ENST00000555565 BADQ92934 168 aa13.19□□□□□ -0.3
TDP1-212ENST00000555565 PAGR1Q9BTK6 254 aa13.19□□□□□ -0.3
TDP1-212ENST00000555565 DHX36Q9H2U1 1008 aaKnown RBP13.19□□□□□ -0.3
TDP1-212ENST00000555565 NDUFB9Q9Y6M9 179 aa13.19□□□□□ -0.3
TDP1-212ENST00000555565 FLT1P17948 1338 aa13.18□□□□□ -0.3
TDP1-212ENST00000555565 TRIM43BA6NCK2 446 aa13.18□□□□□ -0.3
TDP1-212ENST00000555565 MS4A1P11836 297 aa13.18□□□□□ -0.3
TDP1-212ENST00000555565 FOSL2P15408 326 aa13.18□□□□□ -0.3
TDP1-212ENST00000555565 ITGB8P26012 769 aa13.18□□□□□ -0.3
TDP1-212ENST00000555565 CYP2C19P33261 490 aa13.18□□□□□ -0.3
TDP1-212ENST00000555565 DYNLL1P63167 89 aaKnown RBP13.18□□□□□ -0.3
TDP1-212ENST00000555565 GJC2Q5T442 439 aaPredicted RBP13.18□□□□□ -0.3
TDP1-212ENST00000555565 MFSD14CQ5VZR4 134 aa13.18□□□□□ -0.3
TDP1-212ENST00000555565 AACSQ86V21 672 aa13.18□□□□□ -0.3
TDP1-212ENST00000555565 ERC1Q8IUD2 1116 aa13.18□□□□□ -0.3
TDP1-212ENST00000555565 TRIM43Q96BQ3 446 aaPredicted RBP13.18□□□□□ -0.3
TDP1-212ENST00000555565 ATP11BQ9Y2G3 1177 aa13.18□□□□□ -0.3
TDP1-212ENST00000555565 RABGAP1Q9Y3P9 1069 aa13.18□□□□□ -0.3
TDP1-212ENST00000555565 RLFQ13129 1914 aa13.17□□□□□ -0.3
TDP1-212ENST00000555565 SLC15A5A6NIM6 579 aa13.17□□□□□ -0.3
TDP1-212ENST00000555565 TNFRSF10AO00220 468 aa13.17□□□□□ -0.3
TDP1-212ENST00000555565 MSCO60682 206 aa13.17□□□□□ -0.3
TDP1-212ENST00000555565 IDH1O75874 414 aaKnown RBP13.17□□□□□ -0.3
TDP1-212ENST00000555565 CYBAP13498 195 aa13.17□□□□□ -0.3
TDP1-212ENST00000555565 CYP7A1P22680 504 aa13.17□□□□□ -0.3
TDP1-212ENST00000555565 EPHB4P54760 987 aa13.17□□□□□ -0.3
TDP1-212ENST00000555565 GRB14Q14449 540 aa13.17□□□□□ -0.3
TDP1-212ENST00000555565 GRIN2CQ14957 1233 aa13.17□□□□□ -0.3
TDP1-212ENST00000555565 TJAP1Q5JTD0 557 aa13.17□□□□□ -0.3
TDP1-212ENST00000555565 FOXP4Q8IVH2 680 aaPredicted RBP13.17□□□□□ -0.3
TDP1-212ENST00000555565 SIRT2Q8IXJ6 389 aa13.17□□□□□ -0.3
TDP1-212ENST00000555565 RHPN1Q8TCX5 695 aa13.17□□□□□ -0.3
TDP1-212ENST00000555565 GTF3C2Q8WUA4 911 aaPredicted RBP13.17□□□□□ -0.3
TDP1-212ENST00000555565 ANTXR1Q9H6X2 564 aa13.17□□□□□ -0.3
TDP1-212ENST00000555565 IL1RAPL2Q9NP60 686 aa13.17□□□□□ -0.3
TDP1-212ENST00000555565 PDLIM7Q9NR12 457 aa13.17□□□□□ -0.3
TDP1-212ENST00000555565 ZBTB40Q9NUA8 1239 aa13.17□□□□□ -0.3
TDP1-212ENST00000555565 PRKAG2Q9UGJ0 569 aa13.17□□□□□ -0.3
TDP1-212ENST00000555565 PALD1Q9ULE6 856 aa13.17□□□□□ -0.3
TDP1-212ENST00000555565 ZBTB21Q9ULJ3 1066 aa13.17□□□□□ -0.3
TDP1-212ENST00000555565 COG6Q9Y2V7 657 aa13.17□□□□□ -0.3
TDP1-212ENST00000555565 GDF11O95390 407 aa13.16□□□□□ -0.3
TDP1-212ENST00000555565 CNGA1P29973 690 aa13.16□□□□□ -0.3
TDP1-212ENST00000555565 TRIM60Q495X7 471 aa13.16□□□□□ -0.3
TDP1-212ENST00000555565 HSP90AB4PQ58FF6 505 aa13.16□□□□□ -0.3
TDP1-212ENST00000555565 C1orf53Q5VUE5 145 aa13.16□□□□□ -0.3
TDP1-212ENST00000555565 CCAR1Q8IX12 1150 aaKnown RBP13.16□□□□□ -0.3
TDP1-212ENST00000555565 RPAP2Q8IXW5 612 aaPredicted RBP13.16□□□□□ -0.3
TDP1-212ENST00000555565 C12orf42Q96LP6 360 aa13.16□□□□□ -0.3
TDP1-212ENST00000555565 GINM1Q9NU53 330 aa13.16□□□□□ -0.3
TDP1-212ENST00000555565 BTBD7Q9P203 1132 aa13.16□□□□□ -0.3
TDP1-212ENST00000555565 DDX19BQ9UMR2 479 aa13.16□□□□□ -0.3
TDP1-212ENST00000555565 TMEM265A0A087WTH1 108 aa13.15□□□□□ -0.3
TDP1-212ENST00000555565 ATP2B2Q01814 1243 aa13.15□□□□□ -0.3
TDP1-212ENST00000555565 USP17L2Q6R6M4 530 aa13.15□□□□□ -0.3
TDP1-212ENST00000555565 LBX2Q6XYB7 198 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms