RNA–Protein interactions for RNA: ENST00000555351.1

VRK1-204, Transcript of vaccinia related kinase 1, humanhuman

TSL 2

Gene VRK1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-204ENST00000555351 SH3TC2Q8TF17 1288 aa14.23□□□□□ -0.13
VRK1-204ENST00000555351 STRBPQ96SI9 672 aaKnown RBP14.23□□□□□ -0.13
VRK1-204ENST00000555351 CRBNQ96SW2 442 aa14.23□□□□□ -0.13
VRK1-204ENST00000555351 P2RX7Q99572 595 aaKnown RBP14.23□□□□□ -0.13
VRK1-204ENST00000555351 PUS7LQ9H0K6 701 aaKnown RBP14.23□□□□□ -0.13
VRK1-204ENST00000555351 ARPP21Q9UBL0 812 aaPredicted RBP14.23□□□□□ -0.13
VRK1-204ENST00000555351 ZBTB47Q9UFB7 747 aaPredicted RBP14.23□□□□□ -0.13
VRK1-204ENST00000555351 SLC4A4Q9Y6R1 1079 aa14.23□□□□□ -0.13
VRK1-204ENST00000555351 MYH8P13535 1937 aa14.22□□□□□ -0.13
VRK1-204ENST00000555351 USP17L12C9JPN9 530 aa14.22□□□□□ -0.13
VRK1-204ENST00000555351 USP17L21D6R901 530 aa14.22□□□□□ -0.13
VRK1-204ENST00000555351 PRKAB2O43741 272 aa14.22□□□□□ -0.13
VRK1-204ENST00000555351 MX1P20591 662 aa14.22□□□□□ -0.13
VRK1-204ENST00000555351 GUCY1A2P33402 732 aa14.22□□□□□ -0.13
VRK1-204ENST00000555351 FLT3LGP49771 235 aa14.22□□□□□ -0.13
VRK1-204ENST00000555351 C16orf86Q6ZW13 317 aa14.22□□□□□ -0.13
VRK1-204ENST00000555351 GPRC5AQ8NFJ5 357 aa14.22□□□□□ -0.13
VRK1-204ENST00000555351 NKX2-3Q8TAU0 364 aa14.22□□□□□ -0.13
VRK1-204ENST00000555351 PI4K2BQ8TCG2 481 aa14.22□□□□□ -0.13
VRK1-204ENST00000555351 FEZ1Q99689 392 aa14.22□□□□□ -0.13
VRK1-204ENST00000555351 SH2D4AQ9H788 454 aa14.22□□□□□ -0.13
VRK1-204ENST00000555351 GABRQQ9UN88 632 aa14.22□□□□□ -0.13
VRK1-204ENST00000555351 SALL3Q9BXA9 1300 aa14.21□□□□□ -0.13
VRK1-204ENST00000555351 ADCY3O60266 1144 aa14.21□□□□□ -0.13
VRK1-204ENST00000555351 MAPK4P31152 587 aa14.21□□□□□ -0.13
VRK1-204ENST00000555351 SEPT2Q15019 361 aa14.21□□□□□ -0.13
VRK1-204ENST00000555351 SLFNL1Q499Z3 407 aa14.21□□□□□ -0.13
VRK1-204ENST00000555351 CATSPERGQ6ZRH7 1159 aa14.21□□□□□ -0.13
VRK1-204ENST00000555351 LPAR1Q92633 364 aa14.21□□□□□ -0.13
VRK1-204ENST00000555351 YTHDC1Q96MU7 727 aaKnown RBP14.21□□□□□ -0.13
VRK1-204ENST00000555351 RBPJLQ9UBG7 517 aa14.21□□□□□ -0.13
VRK1-204ENST00000555351 STAP2Q9UGK3 403 aa14.21□□□□□ -0.13
VRK1-204ENST00000555351 RABGAP1Q9Y3P9 1069 aa14.21□□□□□ -0.13
VRK1-204ENST00000555351 BAZ2AQ9UIF9 1905 aaKnown RBP14.21□□□□□ -0.14
VRK1-204ENST00000555351 ROBO3Q96MS0 1386 aa14.21□□□□□ -0.14
VRK1-204ENST00000555351 GJB1P08034 283 aa14.2□□□□□ -0.14
VRK1-204ENST00000555351 CYP2D6P10635 497 aa14.2□□□□□ -0.14
VRK1-204ENST00000555351 VCAM1P19320 739 aa14.2□□□□□ -0.14
VRK1-204ENST00000555351 EN2P19622 333 aaPredicted RBP14.2□□□□□ -0.14
VRK1-204ENST00000555351 CDK8P49336 464 aa14.2□□□□□ -0.14
VRK1-204ENST00000555351 PRPF38BQ5VTL8 546 aaKnown RBP14.2□□□□□ -0.14
VRK1-204ENST00000555351 CTR9Q6PD62 1173 aa14.2□□□□□ -0.14
VRK1-204ENST00000555351 ACER1Q8TDN7 264 aa14.2□□□□□ -0.14
VRK1-204ENST00000555351 OSBP2Q969R2 916 aa14.2□□□□□ -0.14
VRK1-204ENST00000555351 GJD2Q9UKL4 321 aa14.2□□□□□ -0.14
VRK1-204ENST00000555351 GSG1L2A8MUP6 293 aa14.19□□□□□ -0.14
VRK1-204ENST00000555351 MPHOSPH10O00566 681 aaKnown RBP14.19□□□□□ -0.14
VRK1-204ENST00000555351 CHGBP05060 677 aa14.19□□□□□ -0.14
VRK1-204ENST00000555351 XRCC5P13010 732 aaKnown RBP14.19□□□□□ -0.14
VRK1-204ENST00000555351 CCL5P13501 91 aa14.19□□□□□ -0.14
VRK1-204ENST00000555351 ERVK-9P63128 1117 aa14.19□□□□□ -0.14
VRK1-204ENST00000555351 ERVK-24P63145 666 aa14.19□□□□□ -0.14
VRK1-204ENST00000555351 CCNA1P78396 465 aa14.19□□□□□ -0.14
VRK1-204ENST00000555351 TRMT44Q8IYL2 757 aaKnown RBP14.19□□□□□ -0.14
VRK1-204ENST00000555351 SLC44A5Q8NCS7 719 aa14.19□□□□□ -0.14
VRK1-204ENST00000555351 SOCS4Q8WXH5 440 aa14.19□□□□□ -0.14
VRK1-204ENST00000555351 ARHGEF10LQ9HCE6 1279 aa14.19□□□□□ -0.14
VRK1-204ENST00000555351 HOXC10Q9NYD6 342 aa14.19□□□□□ -0.14
VRK1-204ENST00000555351 BIN2Q9UBW5 565 aaPredicted RBP14.19□□□□□ -0.14
VRK1-204ENST00000555351 TMX2Q9Y320 296 aa14.19□□□□□ -0.14
VRK1-204ENST00000555351 KIAA0100Q14667 2235 aaKnown RBP14.18□□□□□ -0.14
VRK1-204ENST00000555351 GPAA1O43292 621 aa14.18□□□□□ -0.14
VRK1-204ENST00000555351 ECM2O94769 699 aaPredicted RBP14.18□□□□□ -0.14
VRK1-204ENST00000555351 GJA8P48165 433 aa14.18□□□□□ -0.14
VRK1-204ENST00000555351 EVX2Q03828 476 aa14.18□□□□□ -0.14
VRK1-204ENST00000555351 MTFR1Q15390 333 aa14.18□□□□□ -0.14
VRK1-204ENST00000555351 ANKRD45Q5TZF3 282 aa14.18□□□□□ -0.14
VRK1-204ENST00000555351 TSHZ3Q63HK5 1081 aa14.18□□□□□ -0.14
VRK1-204ENST00000555351 SMC5Q8IY18 1101 aa14.18□□□□□ -0.14
VRK1-204ENST00000555351 DYNLL2Q96FJ2 89 aa14.18□□□□□ -0.14
VRK1-204ENST00000555351 RWDD1Q9H446 243 aaPredicted RBP14.18□□□□□ -0.14
VRK1-204ENST00000555351 KANSL2Q9H9L4 492 aa14.18□□□□□ -0.14
VRK1-204ENST00000555351 ZNF287Q9HBT7 754 aa14.18□□□□□ -0.14
VRK1-204ENST00000555351 TXNRD2Q9NNW7 524 aa14.18□□□□□ -0.14
VRK1-204ENST00000555351 CENPFP49454 3210 aa14.17□□□□□ -0.14
VRK1-204ENST00000555351 PDE4DIPQ5VU43 2346 aa14.17□□□□□ -0.14
VRK1-204ENST00000555351 A0A1W2PRG0 241 aa14.17□□□□□ -0.14
VRK1-204ENST00000555351 PATL2C9JE40 543 aaKnown RBP14.17□□□□□ -0.14
VRK1-204ENST00000555351 HMGCRP04035 888 aa14.17□□□□□ -0.14
VRK1-204ENST00000555351 INHAP05111 366 aa14.17□□□□□ -0.14
VRK1-204ENST00000555351 ICA1Q05084 483 aa14.17□□□□□ -0.14
VRK1-204ENST00000555351 COG2Q14746 738 aa14.17□□□□□ -0.14
VRK1-204ENST00000555351 ZYXQ15942 572 aaKnown RBP14.17□□□□□ -0.14
VRK1-204ENST00000555351 ZMYM1Q5SVZ6 1142 aa14.17□□□□□ -0.14
VRK1-204ENST00000555351 SIAH1Q8IUQ4 282 aa14.17□□□□□ -0.14
VRK1-204ENST00000555351 MB21D1Q8N884 522 aa14.17□□□□□ -0.14
VRK1-204ENST00000555351 OTUD7AQ8TE49 926 aaPredicted RBP14.17□□□□□ -0.14
VRK1-204ENST00000555351 NUDT12Q9BQG2 462 aa14.17□□□□□ -0.14
VRK1-204ENST00000555351 NACAP1Q9BZK3 213 aa14.17□□□□□ -0.14
VRK1-204ENST00000555351 RNF208Q9H0X6 261 aa14.17□□□□□ -0.14
VRK1-204ENST00000555351 RPAP3Q9H6T3 665 aaPredicted RBP14.17□□□□□ -0.14
VRK1-204ENST00000555351 PLXNB2O15031 1838 aa14.17□□□□□ -0.14
VRK1-204ENST00000555351 GREB1LQ9C091 1923 aaPredicted RBP14.17□□□□□ -0.14
VRK1-204ENST00000555351 CYP2D7A0A087X1C5 515 aa14.16□□□□□ -0.14
VRK1-204ENST00000555351 AKR1B1P15121 316 aa14.16□□□□□ -0.14
VRK1-204ENST00000555351 ELNP15502 786 aa14.16□□□□□ -0.14
VRK1-204ENST00000555351 PDE1AP54750 535 aa14.16□□□□□ -0.14
VRK1-204ENST00000555351 POTEEQ6S8J3 1075 aa14.16□□□□□ -0.14
VRK1-204ENST00000555351 CCAR1Q8IX12 1150 aaKnown RBP14.16□□□□□ -0.14
VRK1-204ENST00000555351 USP6NLQ92738 828 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms