RNA–Protein interactions for RNA: ENST00000555117.1

COCH-208, Transcript of cochlin, humanhuman

TSL 2

Gene COCH, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COCH-208ENST00000555117 DDX24Q9GZR7 859 aaKnown RBP eCLIP26.76■■□□□ 1.87
COCH-208ENST00000555117 TXNRD2Q9NNW7 524 aa26.76■■□□□ 1.87
COCH-208ENST00000555117 DCP1AQ9NPI6 582 aaPredicted RBP26.76■■□□□ 1.87
COCH-208ENST00000555117 U2AF1L4Q8WU68 220 aaKnown RBP26.75■■□□□ 1.87
COCH-208ENST00000555117 MBD4O95243 580 aa26.74■■□□□ 1.87
COCH-208ENST00000555117 CENPBP07199 599 aaPredicted RBP26.74■■□□□ 1.87
COCH-208ENST00000555117 GPRC5AQ8NFJ5 357 aa26.74■■□□□ 1.87
COCH-208ENST00000555117 GJD2Q9UKL4 321 aa26.74■■□□□ 1.87
COCH-208ENST00000555117 GUCY1A2P33402 732 aa26.73■■□□□ 1.87
COCH-208ENST00000555117 USP14P54578 494 aa26.73■■□□□ 1.87
COCH-208ENST00000555117 ANKRD45Q5TZF3 282 aa26.73■■□□□ 1.87
COCH-208ENST00000555117 ACER1Q8TDN7 264 aa26.73■■□□□ 1.87
COCH-208ENST00000555117 GTF3C2Q8WUA4 911 aaPredicted RBP26.73■■□□□ 1.87
COCH-208ENST00000555117 KIAA1683Q9H0B3 1180 aa26.73■■□□□ 1.87
COCH-208ENST00000555117 RBPJLQ9UBG7 517 aa26.73■■□□□ 1.87
COCH-208ENST00000555117 SALL3Q9BXA9 1300 aa26.72■■□□□ 1.87
COCH-208ENST00000555117 SGPL1O95470 568 aa26.72■■□□□ 1.87
COCH-208ENST00000555117 CHGBP05060 677 aa26.72■■□□□ 1.87
COCH-208ENST00000555117 CYP2D6P10635 497 aa26.72■■□□□ 1.87
COCH-208ENST00000555117 OTUD7AQ8TE49 926 aaPredicted RBP26.72■■□□□ 1.87
COCH-208ENST00000555117 PAGR1Q9BTK6 254 aa26.72■■□□□ 1.87
COCH-208ENST00000555117 USP17L15C9J2P7 530 aa26.71■■□□□ 1.87
COCH-208ENST00000555117 USP17L13C9JLJ4 530 aa26.71■■□□□ 1.87
COCH-208ENST00000555117 USP17L11C9JVI0 530 aa26.71■■□□□ 1.87
COCH-208ENST00000555117 USP17L18D6R9N7 530 aa26.71■■□□□ 1.87
COCH-208ENST00000555117 USP17L22D6RA61 530 aa26.71■■□□□ 1.87
COCH-208ENST00000555117 USP17L17D6RBQ6 530 aa26.71■■□□□ 1.87
COCH-208ENST00000555117 USP17L19D6RCP7 530 aa26.71■■□□□ 1.87
COCH-208ENST00000555117 USP17L20D6RJB6 530 aa26.71■■□□□ 1.87
COCH-208ENST00000555117 PRKAB2O43741 272 aa26.71■■□□□ 1.87
COCH-208ENST00000555117 ERVK-9P63128 1117 aa26.71■■□□□ 1.87
COCH-208ENST00000555117 ERVK-24P63145 666 aa26.71■■□□□ 1.87
COCH-208ENST00000555117 USP17L24Q0WX57 530 aa26.71■■□□□ 1.87
COCH-208ENST00000555117 SEPT2Q15019 361 aa26.71■■□□□ 1.87
COCH-208ENST00000555117 UBE3CQ15386 1083 aa26.71■■□□□ 1.87
COCH-208ENST00000555117 ATP8A2Q9NTI2 1148 aa26.71■■□□□ 1.87
COCH-208ENST00000555117 ECHDC1Q9NTX5 307 aa26.71■■□□□ 1.87
COCH-208ENST00000555117 MPHOSPH10O00566 681 aaKnown RBP26.7■■□□□ 1.86
COCH-208ENST00000555117 HMGCRP04035 888 aa26.7■■□□□ 1.86
COCH-208ENST00000555117 VCAM1P19320 739 aa26.7■■□□□ 1.86
COCH-208ENST00000555117 Q3C1V9 767 aa26.7■■□□□ 1.86
COCH-208ENST00000555117 UBE2Q1Q7Z7E8 422 aa26.7■■□□□ 1.86
COCH-208ENST00000555117 SLC44A5Q8NCS7 719 aa26.7■■□□□ 1.86
COCH-208ENST00000555117 DEFB118Q96PH6 123 aa26.7■■□□□ 1.86
COCH-208ENST00000555117 PAK6Q9NQU5 681 aaPredicted RBP26.7■■□□□ 1.86
COCH-208ENST00000555117 ZSCAN25Q6NSZ9 544 aa26.69■■□□□ 1.86
COCH-208ENST00000555117 POTEEQ6S8J3 1075 aa26.69■■□□□ 1.86
COCH-208ENST00000555117 CATSPERGQ6ZRH7 1159 aa26.69■■□□□ 1.86
COCH-208ENST00000555117 SWAP70Q9UH65 585 aa26.69■■□□□ 1.86
COCH-208ENST00000555117 FARP2O94887 1054 aaPredicted RBP26.68■■□□□ 1.86
COCH-208ENST00000555117 CYP2B6P20813 491 aa26.68■■□□□ 1.86
COCH-208ENST00000555117 MAPK4P31152 587 aa26.68■■□□□ 1.86
COCH-208ENST00000555117 NUCB1Q02818 461 aa26.68■■□□□ 1.86
COCH-208ENST00000555117 CCAR1Q8IX12 1150 aaKnown RBP26.68■■□□□ 1.86
COCH-208ENST00000555117 SOCS4Q8WXH5 440 aa26.68■■□□□ 1.86
COCH-208ENST00000555117 DYNLL2Q96FJ2 89 aa26.68■■□□□ 1.86
COCH-208ENST00000555117 NUDT12Q9BQG2 462 aa26.68■■□□□ 1.86
COCH-208ENST00000555117 XRN2Q9H0D6 950 aaKnown RBP eCLIP26.68■■□□□ 1.86
COCH-208ENST00000555117 PORCNQ9H237 461 aa26.68■■□□□ 1.86
COCH-208ENST00000555117 TSHZ3Q63HK5 1081 aa26.67■■□□□ 1.86
COCH-208ENST00000555117 TRIB2Q92519 343 aa26.67■■□□□ 1.86
COCH-208ENST00000555117 RABGAP1Q9Y3P9 1069 aa26.67■■□□□ 1.86
COCH-208ENST00000555117 TFRCP02786 760 aaKnown RBP26.66■■□□□ 1.86
COCH-208ENST00000555117 TRIM32Q13049 653 aa26.66■■□□□ 1.86
COCH-208ENST00000555117 B4GALNT3Q6L9W6 998 aa26.66■■□□□ 1.86
COCH-208ENST00000555117 TMEM179Q6ZVK1 233 aa26.66■■□□□ 1.86
COCH-208ENST00000555117 GPR142Q7Z601 462 aa26.66■■□□□ 1.86
COCH-208ENST00000555117 DPF3Q92784 378 aa26.66■■□□□ 1.86
COCH-208ENST00000555117 HTATIP2Q9BUP3 242 aa26.66■■□□□ 1.86
COCH-208ENST00000555117 PUS7LQ9H0K6 701 aaKnown RBP26.66■■□□□ 1.86
COCH-208ENST00000555117 RPAP3Q9H6T3 665 aaPredicted RBP26.66■■□□□ 1.86
COCH-208ENST00000555117 SLC4A4Q9Y6R1 1079 aa26.66■■□□□ 1.86
COCH-208ENST00000555117 TTC41PQ6P2S7 1318 aa26.65■■□□□ 1.86
COCH-208ENST00000555117 A0A1W2PRG0 241 aa26.65■■□□□ 1.86
COCH-208ENST00000555117 CNMDO75829 334 aa26.65■■□□□ 1.86
COCH-208ENST00000555117 CAPN2P17655 700 aa26.65■■□□□ 1.86
COCH-208ENST00000555117 HABP4Q5JVS0 413 aaKnown RBP26.65■■□□□ 1.86
COCH-208ENST00000555117 CHD1LQ86WJ1 897 aa26.65■■□□□ 1.86
COCH-208ENST00000555117 AMOTL1Q8IY63 956 aa26.65■■□□□ 1.86
COCH-208ENST00000555117 PI4K2BQ8TCG2 481 aa26.65■■□□□ 1.86
COCH-208ENST00000555117 DDRGK1Q96HY6 314 aa26.65■■□□□ 1.86
COCH-208ENST00000555117 GPATCH3Q96I76 525 aa26.65■■□□□ 1.86
COCH-208ENST00000555117 LNPKQ9C0E8 428 aa26.65■■□□□ 1.86
COCH-208ENST00000555117 CRISPLD2Q9H0B8 497 aa26.65■■□□□ 1.86
COCH-208ENST00000555117 CYP2D7A0A087X1C5 515 aa26.64■■□□□ 1.86
COCH-208ENST00000555117 USP17L12C9JPN9 530 aa26.64■■□□□ 1.86
COCH-208ENST00000555117 USP17L21D6R901 530 aa26.64■■□□□ 1.86
COCH-208ENST00000555117 H0YGN5 161 aa26.64■■□□□ 1.86
COCH-208ENST00000555117 C12orf60Q5U649 245 aa26.64■■□□□ 1.86
COCH-208ENST00000555117 PLEKHH3Q7Z736 793 aa26.64■■□□□ 1.86
COCH-208ENST00000555117 CWC22Q9HCG8 908 aaKnown RBP26.64■■□□□ 1.86
COCH-208ENST00000555117 STAP2Q9UGK3 403 aa26.64■■□□□ 1.86
COCH-208ENST00000555117 RPTORQ8N122 1335 aa26.64■■□□□ 1.85
COCH-208ENST00000555117 RLFQ13129 1914 aa26.63■■□□□ 1.85
COCH-208ENST00000555117 SMIM22K7EJ46 135 aa26.63■■□□□ 1.85
COCH-208ENST00000555117 XRCC5P13010 732 aaKnown RBP26.63■■□□□ 1.85
COCH-208ENST00000555117 AKR1B1P15121 316 aa26.63■■□□□ 1.85
COCH-208ENST00000555117 MX1P20591 662 aa26.63■■□□□ 1.85
COCH-208ENST00000555117 LBX2Q6XYB7 198 aa26.63■■□□□ 1.85
COCH-208ENST00000555117 HMX1Q9NP08 348 aaPredicted RBP26.63■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms