RNA–Protein interactions for RNA: ENST00000555114.5

NEDD1-207, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 3

Gene NEDD1, Length 731 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-207ENST00000555114 CDK5RAP2Q96SN8 1893 aa18.84■□□□□ 0.61
NEDD1-207ENST00000555114 RANBP2P49792 3224 aaKnown RBP18.83■□□□□ 0.61
NEDD1-207ENST00000555114 PEX10O60683 326 aa18.83■□□□□ 0.6
NEDD1-207ENST00000555114 MNX1P50219 401 aaPredicted RBP18.83■□□□□ 0.6
NEDD1-207ENST00000555114 WDR78Q5VTH9 848 aa18.83■□□□□ 0.6
NEDD1-207ENST00000555114 MFSD14CQ5VZR4 134 aa18.83■□□□□ 0.6
NEDD1-207ENST00000555114 GPR153Q6NV75 609 aa18.83■□□□□ 0.6
NEDD1-207ENST00000555114 USP6NLQ92738 828 aa18.83■□□□□ 0.6
NEDD1-207ENST00000555114 KIAA1683Q9H0B3 1180 aa18.83■□□□□ 0.6
NEDD1-207ENST00000555114 IVNS1ABPQ9Y6Y0 642 aa18.83■□□□□ 0.6
NEDD1-207ENST00000555114 PLXNB2O15031 1838 aa18.83■□□□□ 0.6
NEDD1-207ENST00000555114 DDX60LQ5H9U9 1706 aaKnown RBP18.83■□□□□ 0.6
NEDD1-207ENST00000555114 SOX1O00570 391 aaPredicted RBP18.82■□□□□ 0.6
NEDD1-207ENST00000555114 SYN1P17600 705 aa18.82■□□□□ 0.6
NEDD1-207ENST00000555114 MAP2K5Q13163 448 aa18.82■□□□□ 0.6
NEDD1-207ENST00000555114 TTF1Q15361 905 aaPredicted RBP18.82■□□□□ 0.6
NEDD1-207ENST00000555114 HSP90AB4PQ58FF6 505 aa18.82■□□□□ 0.6
NEDD1-207ENST00000555114 SLC17A8Q8NDX2 589 aa18.82■□□□□ 0.6
NEDD1-207ENST00000555114 EDC3Q96F86 508 aaKnown RBP18.82■□□□□ 0.6
NEDD1-207ENST00000555114 LRCH3Q96II8 777 aa18.82■□□□□ 0.6
NEDD1-207ENST00000555114 ALPK3Q96L96 1907 aa18.82■□□□□ 0.6
NEDD1-207ENST00000555114 SZT2Q5T011 3432 aa18.81■□□□□ 0.6
NEDD1-207ENST00000555114 POLR3DP05423 398 aaPredicted RBP18.81■□□□□ 0.6
NEDD1-207ENST00000555114 CATSPERGQ6ZRH7 1159 aa18.81■□□□□ 0.6
NEDD1-207ENST00000555114 AACSQ86V21 672 aa18.81■□□□□ 0.6
NEDD1-207ENST00000555114 PFASO15067 1338 aa18.8■□□□□ 0.6
NEDD1-207ENST00000555114 SLC15A5A6NIM6 579 aa18.8■□□□□ 0.6
NEDD1-207ENST00000555114 MSCO60682 206 aa18.8■□□□□ 0.6
NEDD1-207ENST00000555114 VCAM1P19320 739 aa18.8■□□□□ 0.6
NEDD1-207ENST00000555114 CCND3P30281 292 aaPredicted RBP18.8■□□□□ 0.6
NEDD1-207ENST00000555114 MAGEA10P43363 369 aaPredicted RBP18.8■□□□□ 0.6
NEDD1-207ENST00000555114 CCL14Q16627 93 aa18.8■□□□□ 0.6
NEDD1-207ENST00000555114 CEP85Q6P2H3 762 aa18.8■□□□□ 0.6
NEDD1-207ENST00000555114 LBX2Q6XYB7 198 aa18.8■□□□□ 0.6
NEDD1-207ENST00000555114 TDHQ8IZJ6 230 aa18.8■□□□□ 0.6
NEDD1-207ENST00000555114 UBE2OQ9C0C9 1292 aaKnown RBP18.8■□□□□ 0.6
NEDD1-207ENST00000555114 MYH1P12882 1939 aa18.8■□□□□ 0.6
NEDD1-207ENST00000555114 MAGEB6P1A0A0J9YX57 407 aa18.79■□□□□ 0.6
NEDD1-207ENST00000555114 COL6A1P12109 1028 aa18.79■□□□□ 0.6
NEDD1-207ENST00000555114 ATP2B2Q01814 1243 aa18.79■□□□□ 0.6
NEDD1-207ENST00000555114 LRIT3Q3SXY7 679 aa18.79■□□□□ 0.6
NEDD1-207ENST00000555114 LHX8Q68G74 356 aa18.79■□□□□ 0.6
NEDD1-207ENST00000555114 CRNKL1Q9BZJ0 848 aaKnown RBP18.79■□□□□ 0.6
NEDD1-207ENST00000555114 ANTXR1Q9H6X2 564 aa18.79■□□□□ 0.6
NEDD1-207ENST00000555114 MYO5AQ9Y4I1 1855 aaKnown RBP18.79■□□□□ 0.6
NEDD1-207ENST00000555114 CNMDO75829 334 aa18.78■□□□□ 0.6
NEDD1-207ENST00000555114 PTPREP23469 700 aa18.78■□□□□ 0.6
NEDD1-207ENST00000555114 HNRNPUQ00839 825 aaKnown RBP eCLIP18.78■□□□□ 0.6
NEDD1-207ENST00000555114 RPAP3Q9H6T3 665 aaPredicted RBP18.78■□□□□ 0.6
NEDD1-207ENST00000555114 EXOC6BQ9Y2D4 811 aa18.78■□□□□ 0.6
NEDD1-207ENST00000555114 NDUFB9Q9Y6M9 179 aa18.78■□□□□ 0.6
NEDD1-207ENST00000555114 RLBP1P12271 317 aa18.77■□□□□ 0.6
NEDD1-207ENST00000555114 SHMT1P34896 483 aa18.77■□□□□ 0.6
NEDD1-207ENST00000555114 ACER1Q8TDN7 264 aa18.77■□□□□ 0.6
NEDD1-207ENST00000555114 RIOK1Q9BRS2 568 aaKnown RBP18.77■□□□□ 0.6
NEDD1-207ENST00000555114 SPDYE16A6NNV3 312 aaPredicted RBP18.76■□□□□ 0.59
NEDD1-207ENST00000555114 MPHOSPH10O00566 681 aaKnown RBP18.76■□□□□ 0.59
NEDD1-207ENST00000555114 HOXC6P09630 235 aa18.76■□□□□ 0.59
NEDD1-207ENST00000555114 CNGA1P29973 690 aa18.76■□□□□ 0.59
NEDD1-207ENST00000555114 PLCD1P51178 756 aa18.76■□□□□ 0.59
NEDD1-207ENST00000555114 GRB14Q14449 540 aa18.76■□□□□ 0.59
NEDD1-207ENST00000555114 SLC9C2Q5TAH2 1124 aa18.76■□□□□ 0.59
NEDD1-207ENST00000555114 POTEEQ6S8J3 1075 aa18.76■□□□□ 0.59
NEDD1-207ENST00000555114 CLASRPQ8N2M8 674 aaKnown RBP18.76■□□□□ 0.59
NEDD1-207ENST00000555114 DEFB123Q8N688 67 aa18.76■□□□□ 0.59
NEDD1-207ENST00000555114 MCM9Q9NXL9 1143 aa18.76■□□□□ 0.59
NEDD1-207ENST00000555114 HOXC10Q9NYD6 342 aa18.76■□□□□ 0.59
NEDD1-207ENST00000555114 DDX20Q9UHI6 824 aaKnown RBP18.76■□□□□ 0.59
NEDD1-207ENST00000555114 MS4A1P11836 297 aa18.75■□□□□ 0.59
NEDD1-207ENST00000555114 COG2Q14746 738 aa18.75■□□□□ 0.59
NEDD1-207ENST00000555114 LRRC26Q2I0M4 334 aa18.75■□□□□ 0.59
NEDD1-207ENST00000555114 DPP9Q86TI2 863 aa18.75■□□□□ 0.59
NEDD1-207ENST00000555114 RHPN1Q8TCX5 695 aa18.75■□□□□ 0.59
NEDD1-207ENST00000555114 LPAR1Q92633 364 aa18.75■□□□□ 0.59
NEDD1-207ENST00000555114 SLC5A4Q9NY91 659 aa18.75■□□□□ 0.59
NEDD1-207ENST00000555114 BTBD7Q9P203 1132 aa18.75■□□□□ 0.59
NEDD1-207ENST00000555114 STRNO43815 780 aa18.74■□□□□ 0.59
NEDD1-207ENST00000555114 IFIT2P09913 472 aaKnown RBP18.74■□□□□ 0.59
NEDD1-207ENST00000555114 PDE6AP16499 860 aa18.74■□□□□ 0.59
NEDD1-207ENST00000555114 SEPT2Q15019 361 aa18.74■□□□□ 0.59
NEDD1-207ENST00000555114 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.74■□□□□ 0.59
NEDD1-207ENST00000555114 LBHD1Q9BQE6 289 aaPredicted RBP18.74■□□□□ 0.59
NEDD1-207ENST00000555114 TANGO6Q9C0B7 1094 aa18.74■□□□□ 0.59
NEDD1-207ENST00000555114 SENP6Q9GZR1 1112 aaPredicted RBP18.74■□□□□ 0.59
NEDD1-207ENST00000555114 IL1RAPL2Q9NP60 686 aa18.74■□□□□ 0.59
NEDD1-207ENST00000555114 PRKAG2Q9UGJ0 569 aa18.74■□□□□ 0.59
NEDD1-207ENST00000555114 SWAP70Q9UH65 585 aa18.74■□□□□ 0.59
NEDD1-207ENST00000555114 DNM1LO00429 736 aa18.73■□□□□ 0.59
NEDD1-207ENST00000555114 DLL1O00548 723 aa18.73■□□□□ 0.59
NEDD1-207ENST00000555114 HMMRO75330 724 aa18.73■□□□□ 0.59
NEDD1-207ENST00000555114 GABPAQ06546 454 aa18.73■□□□□ 0.59
NEDD1-207ENST00000555114 TMEM179Q6ZVK1 233 aa18.73■□□□□ 0.59
NEDD1-207ENST00000555114 MB21D1Q8N884 522 aa18.73■□□□□ 0.59
NEDD1-207ENST00000555114 KIF1BPQ96EK5 621 aa18.73■□□□□ 0.59
NEDD1-207ENST00000555114 DNAJC2Q99543 621 aaKnown RBP18.73■□□□□ 0.59
NEDD1-207ENST00000555114 SH2D4AQ9H788 454 aa18.73■□□□□ 0.59
NEDD1-207ENST00000555114 FLRT1Q9NZU1 646 aa18.73■□□□□ 0.59
NEDD1-207ENST00000555114 ZNF532Q9HCE3 1301 aa18.73■□□□□ 0.59
NEDD1-207ENST00000555114 GUCY1A2P33402 732 aa18.72■□□□□ 0.59
NEDD1-207ENST00000555114 MDM2Q00987 491 aaPredicted RBP18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms