RNA–Protein interactions for RNA: ENST00000555082.5

PRKCH-211, Transcript of protein kinase C eta, humanhuman

TSL 1 (best) BASIC

Gene PRKCH, Length 2,932 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-211ENST00000555082 ZBTB9Q96C00 473 aa11.41□□□□□ -0.58
PRKCH-211ENST00000555082 MYL10Q9BUA6 226 aa11.41□□□□□ -0.58
PRKCH-211ENST00000555082 SCN9AQ15858 1988 aa11.41□□□□□ -0.58
PRKCH-211ENST00000555082 NFKBIEO00221 500 aa11.41□□□□□ -0.58
PRKCH-211ENST00000555082 SMC2O95347 1197 aa11.41□□□□□ -0.58
PRKCH-211ENST00000555082 BAG3O95817 575 aa11.41□□□□□ -0.58
PRKCH-211ENST00000555082 LDHCP07864 332 aa11.41□□□□□ -0.58
PRKCH-211ENST00000555082 PLCD1P51178 756 aa11.41□□□□□ -0.58
PRKCH-211ENST00000555082 SNW1Q13573 536 aaKnown RBP11.41□□□□□ -0.58
PRKCH-211ENST00000555082 ISM2Q6H9L7 571 aa11.41□□□□□ -0.58
PRKCH-211ENST00000555082 CCDC73Q6ZRK6 1079 aa11.41□□□□□ -0.58
PRKCH-211ENST00000555082 FSIP1Q8NA03 581 aa11.41□□□□□ -0.58
PRKCH-211ENST00000555082 MRFAP1L1Q96HT8 127 aa11.41□□□□□ -0.58
PRKCH-211ENST00000555082 USP28Q96RU2 1077 aa11.41□□□□□ -0.58
PRKCH-211ENST00000555082 KINO60870 393 aaKnown RBP11.4□□□□□ -0.58
PRKCH-211ENST00000555082 ME1P48163 572 aa11.4□□□□□ -0.58
PRKCH-211ENST00000555082 PRELPP51888 382 aa11.4□□□□□ -0.58
PRKCH-211ENST00000555082 PTPN21Q16825 1174 aa11.4□□□□□ -0.58
PRKCH-211ENST00000555082 FAM47AQ5JRC9 791 aa11.4□□□□□ -0.58
PRKCH-211ENST00000555082 STRIP1Q5VSL9 837 aa11.4□□□□□ -0.58
PRKCH-211ENST00000555082 TAF3Q5VWG9 929 aa11.4□□□□□ -0.58
PRKCH-211ENST00000555082 TMC6Q7Z403 805 aa11.4□□□□□ -0.58
PRKCH-211ENST00000555082 CHMP4CQ96CF2 233 aa11.4□□□□□ -0.58
PRKCH-211ENST00000555082 NOL10Q9BSC4 688 aaKnown RBP11.4□□□□□ -0.58
PRKCH-211ENST00000555082 DDX4Q9NQI0 724 aaKnown RBP11.4□□□□□ -0.58
PRKCH-211ENST00000555082 MKRN1Q9UHC7 482 aaKnown RBP11.4□□□□□ -0.58
PRKCH-211ENST00000555082 PSMD14O00487 310 aa11.4□□□□□ -0.58
PRKCH-211ENST00000555082 POLR3GO15318 223 aaPredicted RBP11.4□□□□□ -0.58
PRKCH-211ENST00000555082 HMGB1P09429 215 aaKnown RBP11.4□□□□□ -0.58
PRKCH-211ENST00000555082 CDK11BP21127 795 aaKnown RBP11.4□□□□□ -0.58
PRKCH-211ENST00000555082 PPP4CP60510 307 aa11.4□□□□□ -0.58
PRKCH-211ENST00000555082 SCRN1Q12765 414 aa11.4□□□□□ -0.58
PRKCH-211ENST00000555082 GAKO14976 1311 aa11.4□□□□□ -0.59
PRKCH-211ENST00000555082 BAZ2AQ9UIF9 1905 aaKnown RBP11.4□□□□□ -0.59
PRKCH-211ENST00000555082 SHTN1A0MZ66 631 aa11.39□□□□□ -0.59
PRKCH-211ENST00000555082 RANBP6O60518 1105 aaKnown RBP11.39□□□□□ -0.59
PRKCH-211ENST00000555082 NMT2O60551 498 aa11.39□□□□□ -0.59
PRKCH-211ENST00000555082 CRKP46108 304 aa11.39□□□□□ -0.59
PRKCH-211ENST00000555082 NFIAQ12857 509 aa11.39□□□□□ -0.59
PRKCH-211ENST00000555082 APOBEC3HQ6NTF7 200 aaKnown RBP11.39□□□□□ -0.59
PRKCH-211ENST00000555082 SARM1Q6SZW1 724 aa11.39□□□□□ -0.59
PRKCH-211ENST00000555082 SUPT20HQ8NEM7 779 aa11.39□□□□□ -0.59
PRKCH-211ENST00000555082 STAG1Q8WVM7 1258 aa11.39□□□□□ -0.59
PRKCH-211ENST00000555082 PSMD1Q99460 953 aa11.39□□□□□ -0.59
PRKCH-211ENST00000555082 FHDC1Q9C0D6 1143 aaPredicted RBP11.39□□□□□ -0.59
PRKCH-211ENST00000555082 CFAP45Q9UL16 551 aa11.39□□□□□ -0.59
PRKCH-211ENST00000555082 CD2APQ9Y5K6 639 aa11.39□□□□□ -0.59
PRKCH-211ENST00000555082 KLF18A0A0U1RQI7 1052 aa11.39□□□□□ -0.59
PRKCH-211ENST00000555082 A0A1B0GVL5 298 aa11.39□□□□□ -0.59
PRKCH-211ENST00000555082 ADD1P35611 737 aaKnown RBP11.39□□□□□ -0.59
PRKCH-211ENST00000555082 E4F1Q66K89 784 aaPredicted RBP11.39□□□□□ -0.59
PRKCH-211ENST00000555082 SDF4Q9BRK5 362 aa11.39□□□□□ -0.59
PRKCH-211ENST00000555082 SPON1Q9HCB6 807 aa11.39□□□□□ -0.59
PRKCH-211ENST00000555082 ATP8A2Q9NTI2 1148 aa11.39□□□□□ -0.59
PRKCH-211ENST00000555082 USP40Q9NVE5 1235 aa11.39□□□□□ -0.59
PRKCH-211ENST00000555082 ZMYM6O95789 1325 aa11.39□□□□□ -0.59
PRKCH-211ENST00000555082 CCDC66A2RUB6 948 aa11.39□□□□□ -0.59
PRKCH-211ENST00000555082 NEMFO60524 1076 aa11.39□□□□□ -0.59
PRKCH-211ENST00000555082 PDIA3P30101 505 aaKnown RBP11.39□□□□□ -0.59
PRKCH-211ENST00000555082 IARSP41252 1262 aaKnown RBP11.39□□□□□ -0.59
PRKCH-211ENST00000555082 OTUD7BQ6GQQ9 843 aa11.39□□□□□ -0.59
PRKCH-211ENST00000555082 CDC42EP5Q6NZY7 148 aa11.39□□□□□ -0.59
PRKCH-211ENST00000555082 NBPF11Q86T75 865 aa11.39□□□□□ -0.59
PRKCH-211ENST00000555082 HOMER1Q86YM7 354 aa11.39□□□□□ -0.59
PRKCH-211ENST00000555082 ZFPM1Q8IX07 1006 aa11.39□□□□□ -0.59
PRKCH-211ENST00000555082 TIGD1Q96MW7 591 aa11.39□□□□□ -0.59
PRKCH-211ENST00000555082 TAOK3Q9H2K8 898 aa11.39□□□□□ -0.59
PRKCH-211ENST00000555082 TMX1Q9H3N1 280 aa11.39□□□□□ -0.59
PRKCH-211ENST00000555082 IFNKQ9P0W0 207 aa11.39□□□□□ -0.59
PRKCH-211ENST00000555082 SCAF8Q9UPN6 1271 aaKnown RBP11.39□□□□□ -0.59
PRKCH-211ENST00000555082 FLT1P17948 1338 aa11.38□□□□□ -0.59
PRKCH-211ENST00000555082 IFIT3O14879 490 aaKnown RBP11.38□□□□□ -0.59
PRKCH-211ENST00000555082 POLR3DP05423 398 aaPredicted RBP11.38□□□□□ -0.59
PRKCH-211ENST00000555082 CLCN6P51797 869 aa11.38□□□□□ -0.59
PRKCH-211ENST00000555082 GOLGA8FQ08AF8 430 aa11.38□□□□□ -0.59
PRKCH-211ENST00000555082 GOLGA8DPQ0D2H9 430 aa11.38□□□□□ -0.59
PRKCH-211ENST00000555082 TCP10Q12799 353 aa11.38□□□□□ -0.59
PRKCH-211ENST00000555082 ARHGAP29Q52LW3 1261 aa11.38□□□□□ -0.59
PRKCH-211ENST00000555082 TMEM67Q5HYA8 995 aa11.38□□□□□ -0.59
PRKCH-211ENST00000555082 TEKT1Q969V4 418 aa11.38□□□□□ -0.59
PRKCH-211ENST00000555082 FAM163AQ96GL9 167 aaPredicted RBP11.38□□□□□ -0.59
PRKCH-211ENST00000555082 PPP1R13BQ96KQ4 1090 aa11.38□□□□□ -0.59
PRKCH-211ENST00000555082 AGXT2Q9BYV1 514 aa11.38□□□□□ -0.59
PRKCH-211ENST00000555082 XPO4Q9C0E2 1151 aaKnown RBP11.38□□□□□ -0.59
PRKCH-211ENST00000555082 ALDH8A1Q9H2A2 487 aaPredicted RBP11.38□□□□□ -0.59
PRKCH-211ENST00000555082 EPC1Q9H2F5 836 aa11.38□□□□□ -0.59
PRKCH-211ENST00000555082 ANO10Q9NW15 660 aa11.38□□□□□ -0.59
PRKCH-211ENST00000555082 MYH2Q9UKX2 1941 aa11.38□□□□□ -0.59
PRKCH-211ENST00000555082 WDHD1O75717 1129 aaPredicted RBP11.38□□□□□ -0.59
PRKCH-211ENST00000555082 CEP57L1Q8IYX8 460 aa11.38□□□□□ -0.59
PRKCH-211ENST00000555082 FAM177A1Q8N128 213 aaPredicted RBP11.38□□□□□ -0.59
PRKCH-211ENST00000555082 IGDCC4Q8TDY8 1250 aa11.38□□□□□ -0.59
PRKCH-211ENST00000555082 ADAMTSL1Q8N6G6 1762 aa11.38□□□□□ -0.59
PRKCH-211ENST00000555082 GOLGA8BA8MQT2 603 aa11.37□□□□□ -0.59
PRKCH-211ENST00000555082 SH2B2O14492 632 aaPredicted RBP11.37□□□□□ -0.59
PRKCH-211ENST00000555082 C12orf60Q5U649 245 aa11.37□□□□□ -0.59
PRKCH-211ENST00000555082 ARMCX5Q6P1M9 558 aa11.37□□□□□ -0.59
PRKCH-211ENST00000555082 NIM1KQ8IY84 436 aa11.37□□□□□ -0.59
PRKCH-211ENST00000555082 HPS5Q9UPZ3 1129 aa11.37□□□□□ -0.59
PRKCH-211ENST00000555082 LAMA4Q16363 1823 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms