RNA–Protein interactions for RNA: ENST00000554956.5

PSMC6-208, Transcript of proteasome 26S subunit, ATPase 6, human

TSL 3

Gene PSMC6, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC6-208	ENST00000554956	ZNF394	Q53GI3	561 aa		8.31	□□□□□ -1.08
PSMC6-208	ENST00000554956	PRAMEF13	Q5VWM6	474 aa		8.31	□□□□□ -1.08
PSMC6-208	ENST00000554956	FAM196A	Q6ZSG2	479 aa		8.31	□□□□□ -1.08
PSMC6-208	ENST00000554956	ZNF296	Q8WUU4	475 aa	Predicted RBP	8.31	□□□□□ -1.08
PSMC6-208	ENST00000554956	FOXQ1	Q9C009	403 aa		8.31	□□□□□ -1.08
PSMC6-208	ENST00000554956	ZC3H7B	Q9UGR2	993 aa	Known RBP	8.31	□□□□□ -1.08
PSMC6-208	ENST00000554956	PCDHGB7	Q9Y5F8	929 aa		8.31	□□□□□ -1.08
PSMC6-208	ENST00000554956	MAP3K4	Q9Y6R4	1608 aa		8.31	□□□□□ -1.08
PSMC6-208	ENST00000554956	ABCA8	O94911	1581 aa		8.31	□□□□□ -1.08
PSMC6-208	ENST00000554956	CD109	Q6YHK3	1445 aa		8.3	□□□□□ -1.08
PSMC6-208	ENST00000554956	CRK	P46108	304 aa		8.3	□□□□□ -1.08
PSMC6-208	ENST00000554956	REC114	Q7Z4M0	266 aa		8.3	□□□□□ -1.08
PSMC6-208	ENST00000554956	DTX1	Q86Y01	620 aa		8.3	□□□□□ -1.08
PSMC6-208	ENST00000554956	ACSF2	Q96CM8	615 aa	Predicted RBP	8.3	□□□□□ -1.08
PSMC6-208	ENST00000554956	HEXIM2	Q96MH2	286 aa	Known RBP	8.3	□□□□□ -1.08
PSMC6-208	ENST00000554956	MIPEP	Q99797	713 aa		8.3	□□□□□ -1.08
PSMC6-208	ENST00000554956	KCNQ5	Q9NR82	932 aa		8.3	□□□□□ -1.08
PSMC6-208	ENST00000554956	SUPT16H	Q9Y5B9	1047 aa	Known RBP	8.3	□□□□□ -1.08
PSMC6-208	ENST00000554956	TACC3	Q9Y6A5	838 aa		8.3	□□□□□ -1.08
PSMC6-208	ENST00000554956	GREM1	O60565	184 aa		8.29	□□□□□ -1.08
PSMC6-208	ENST00000554956	SLITRK5	O94991	958 aa		8.29	□□□□□ -1.08
PSMC6-208	ENST00000554956	EOMES	O95936	686 aa		8.29	□□□□□ -1.08
PSMC6-208	ENST00000554956	CAP2	P40123	477 aa		8.29	□□□□□ -1.08
PSMC6-208	ENST00000554956	MPP2	Q14168	576 aa		8.29	□□□□□ -1.08
PSMC6-208	ENST00000554956	XP32	Q5T750	250 aa		8.29	□□□□□ -1.08
PSMC6-208	ENST00000554956	TMEM87B	Q96K49	555 aa		8.29	□□□□□ -1.08
PSMC6-208	ENST00000554956	UBP1	Q9NZI7	540 aa		8.29	□□□□□ -1.08
PSMC6-208	ENST00000554956	ATP10B	O94823	1461 aa		8.29	□□□□□ -1.08
PSMC6-208	ENST00000554956	GOLGA3	Q08378	1498 aa		8.28	□□□□□ -1.08
PSMC6-208	ENST00000554956	TEX14	Q8IWB6	1497 aa		8.28	□□□□□ -1.08
PSMC6-208	ENST00000554956	CST3	P01034	146 aa	Predicted RBP	8.28	□□□□□ -1.08
PSMC6-208	ENST00000554956	PLCG1	P19174	1290 aa		8.28	□□□□□ -1.08
PSMC6-208	ENST00000554956	PDE4B	Q07343	736 aa		8.28	□□□□□ -1.08
PSMC6-208	ENST00000554956	DIEXF	Q68CQ4	756 aa	Known RBP	8.28	□□□□□ -1.08
PSMC6-208	ENST00000554956	FAM214B	Q7L5A3	538 aa		8.28	□□□□□ -1.08
PSMC6-208	ENST00000554956	USP48	Q86UV5	1035 aa		8.28	□□□□□ -1.08
PSMC6-208	ENST00000554956	PLD6	Q8N2A8	252 aa	Known RBP	8.28	□□□□□ -1.08
PSMC6-208	ENST00000554956	RIN3	Q8TB24	985 aa		8.28	□□□□□ -1.08
PSMC6-208	ENST00000554956	RNF34	Q969K3	372 aa		8.28	□□□□□ -1.08
PSMC6-208	ENST00000554956	METTL5	Q9NRN9	209 aa	Known RBP	8.28	□□□□□ -1.08
PSMC6-208	ENST00000554956	MAGI3	Q5TCQ9	1506 aa		8.28	□□□□□ -1.08
PSMC6-208	ENST00000554956	CNTNAP4	Q9C0A0	1308 aa		8.28	□□□□□ -1.08
PSMC6-208	ENST00000554956	UPK3BL1	B0FP48	263 aa		8.27	□□□□□ -1.09
PSMC6-208	ENST00000554956	UPK3BL2	E5RIL1	263 aa		8.27	□□□□□ -1.09
PSMC6-208	ENST00000554956	SCAMP3	O14828	347 aa	Known RBP	8.27	□□□□□ -1.09
PSMC6-208	ENST00000554956	ITIH2	P19823	946 aa		8.27	□□□□□ -1.09
PSMC6-208	ENST00000554956	RANGAP1	P46060	587 aa	Predicted RBP	8.27	□□□□□ -1.09
PSMC6-208	ENST00000554956	MRPL41	Q8IXM3	137 aa	Known RBP	8.27	□□□□□ -1.09
PSMC6-208	ENST00000554956	BRMS1	Q9HCU9	246 aa		8.27	□□□□□ -1.09
PSMC6-208	ENST00000554956	REV1	Q9UBZ9	1251 aa		8.27	□□□□□ -1.09
PSMC6-208	ENST00000554956	HTR3B	O95264	441 aa		8.26	□□□□□ -1.09
PSMC6-208	ENST00000554956	OXCT1	P55809	520 aa		8.26	□□□□□ -1.09
PSMC6-208	ENST00000554956	C9orf131	Q5VYM1	1079 aa		8.26	□□□□□ -1.09
PSMC6-208	ENST00000554956	LETMD1	Q6P1Q0	360 aa		8.26	□□□□□ -1.09
PSMC6-208	ENST00000554956	METTL16	Q86W50	562 aa	Known RBP	8.26	□□□□□ -1.09
PSMC6-208	ENST00000554956	LRRC3	Q9BY71	257 aa		8.26	□□□□□ -1.09
PSMC6-208	ENST00000554956	ADAM30	Q9UKF2	790 aa		8.26	□□□□□ -1.09
PSMC6-208	ENST00000554956	DNAJA2	O60884	412 aa		8.25	□□□□□ -1.09
PSMC6-208	ENST00000554956	RAPGEF3	O95398	923 aa		8.25	□□□□□ -1.09
PSMC6-208	ENST00000554956	RACK1	P63244	317 aa	Known RBP	8.25	□□□□□ -1.09
PSMC6-208	ENST00000554956	HDLBP	Q00341	1268 aa	Known RBP	8.25	□□□□□ -1.09
PSMC6-208	ENST00000554956	CWF19L2	Q2TBE0	894 aa	Known RBP	8.25	□□□□□ -1.09
PSMC6-208	ENST00000554956	SEZ6	Q53EL9	994 aa		8.25	□□□□□ -1.09
PSMC6-208	ENST00000554956	NFXL1	Q6ZNB6	911 aa		8.25	□□□□□ -1.09
PSMC6-208	ENST00000554956	ARHGAP27	Q6ZUM4	889 aa		8.25	□□□□□ -1.09
PSMC6-208	ENST00000554956	KIAA0825	Q8IV33	1275 aa		8.25	□□□□□ -1.09
PSMC6-208	ENST00000554956	MCAT	Q8IVS2	390 aa	Known RBP	8.25	□□□□□ -1.09
PSMC6-208	ENST00000554956	FAM9A	Q8IZU1	332 aa	Predicted RBP	8.25	□□□□□ -1.09
PSMC6-208	ENST00000554956	MFSD2A	Q8NA29	543 aa		8.25	□□□□□ -1.09
PSMC6-208	ENST00000554956	EAF1	Q96JC9	268 aa	Predicted RBP	8.25	□□□□□ -1.09
PSMC6-208	ENST00000554956	SPON2	Q9BUD6	331 aa		8.25	□□□□□ -1.09
PSMC6-208	ENST00000554956	KLHL3	Q9UH77	587 aa		8.25	□□□□□ -1.09
PSMC6-208	ENST00000554956	PRR36	Q9H6K5	1346 aa		8.25	□□□□□ -1.09
PSMC6-208	ENST00000554956	APOBR	Q0VD83	1088 aa		8.24	□□□□□ -1.09
PSMC6-208	ENST00000554956	SLC6A19	Q695T7	634 aa		8.24	□□□□□ -1.09
PSMC6-208	ENST00000554956	NBPF11	Q86T75	865 aa		8.24	□□□□□ -1.09
PSMC6-208	ENST00000554956	FAM13C	Q8NE31	585 aa		8.24	□□□□□ -1.09
PSMC6-208	ENST00000554956	PRDM5	Q9NQX1	630 aa	Predicted RBP	8.24	□□□□□ -1.09
PSMC6-208	ENST00000554956	BSDC1	Q9NW68	430 aa	Predicted RBP	8.24	□□□□□ -1.09
PSMC6-208	ENST00000554956	CCDC39	Q9UFE4	941 aa		8.24	□□□□□ -1.09
PSMC6-208	ENST00000554956	TPX2	Q9ULW0	747 aa	Known RBP	8.24	□□□□□ -1.09
PSMC6-208	ENST00000554956	PLAGL2	Q9UPG8	496 aa		8.24	□□□□□ -1.09
PSMC6-208	ENST00000554956	PRR33	A8MZF0	331 aa		8.23	□□□□□ -1.09
PSMC6-208	ENST00000554956	CEACAM5	P06731	702 aa		8.23	□□□□□ -1.09
PSMC6-208	ENST00000554956	TMEM201	Q5SNT2	666 aa		8.23	□□□□□ -1.09
PSMC6-208	ENST00000554956	CDH24	Q86UP0	819 aa		8.23	□□□□□ -1.09
PSMC6-208	ENST00000554956	NETO1	Q8TDF5	533 aa		8.23	□□□□□ -1.09
PSMC6-208	ENST00000554956	GTF2IRD1	Q9UHL9	959 aa		8.23	□□□□□ -1.09
PSMC6-208	ENST00000554956	DDX41	Q9UJV9	622 aa	Known RBP	8.23	□□□□□ -1.09
PSMC6-208	ENST00000554956	PCDHB14	Q9Y5E9	798 aa		8.23	□□□□□ -1.09
PSMC6-208	ENST00000554956	CTTNBP2	Q8WZ74	1663 aa		8.23	□□□□□ -1.09
PSMC6-208	ENST00000554956	ROBO2	Q9HCK4	1378 aa		8.22	□□□□□ -1.09
PSMC6-208	ENST00000554956	FHOD3	Q2V2M9	1422 aa		8.22	□□□□□ -1.09
PSMC6-208	ENST00000554956	NUP153	P49790	1475 aa	Known RBP	8.22	□□□□□ -1.09
PSMC6-208	ENST00000554956	CHURC1-FNTB	B4DL54	471 aa		8.22	□□□□□ -1.09
PSMC6-208	ENST00000554956	PRNP	P04156	253 aa		8.22	□□□□□ -1.09
PSMC6-208	ENST00000554956	ZNF574	Q6ZN55	896 aa	Predicted RBP	8.22	□□□□□ -1.09
PSMC6-208	ENST00000554956	VSIG10L	Q86VR7	867 aa		8.22	□□□□□ -1.09
PSMC6-208	ENST00000554956	NT5C1A	Q9BXI3	368 aa		8.22	□□□□□ -1.09
PSMC6-208	ENST00000554956	ARAP3	Q8WWN8	1544 aa		8.22	□□□□□ -1.09

Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms