RNA–Protein interactions for RNA: ENST00000554947.5

SDR39U1-209, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 1,203 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-209ENST00000554947 USP14P54578 494 aa28.79■■■□□ 2.2
SDR39U1-209ENST00000554947 MTMR2Q13614 643 aa28.79■■■□□ 2.2
SDR39U1-209ENST00000554947 GADL1Q6ZQY3 521 aa28.79■■■□□ 2.2
SDR39U1-209ENST00000554947 ZNF444Q8N0Y2 327 aaPredicted RBP28.79■■■□□ 2.2
SDR39U1-209ENST00000554947 KIAA1683Q9H0B3 1180 aa28.79■■■□□ 2.2
SDR39U1-209ENST00000554947 ZFYVE28Q9HCC9 887 aa28.79■■■□□ 2.2
SDR39U1-209ENST00000554947 CTNNA3Q9UI47 895 aa28.79■■■□□ 2.2
SDR39U1-209ENST00000554947 AGTPBP1Q9UPW5 1226 aa28.79■■■□□ 2.2
SDR39U1-209ENST00000554947 DDX52Q9Y2R4 599 aaKnown RBP eCLIP28.79■■■□□ 2.2
SDR39U1-209ENST00000554947 TBC1D8O95759 1140 aa28.78■■■□□ 2.2
SDR39U1-209ENST00000554947 HMGCS2P54868 508 aa28.78■■■□□ 2.2
SDR39U1-209ENST00000554947 TAF1CQ15572 869 aaPredicted RBP28.78■■■□□ 2.2
SDR39U1-209ENST00000554947 KANSL2Q9H9L4 492 aa28.78■■■□□ 2.2
SDR39U1-209ENST00000554947 TMOD4Q9NZQ9 345 aa28.78■■■□□ 2.2
SDR39U1-209ENST00000554947 TSKSQ9UJT2 592 aa28.78■■■□□ 2.2
SDR39U1-209ENST00000554947 PLIN4Q96Q06 1357 aa28.77■■■□□ 2.2
SDR39U1-209ENST00000554947 PDHXO00330 501 aa28.77■■■□□ 2.2
SDR39U1-209ENST00000554947 CRHR2Q13324 411 aa28.77■■■□□ 2.2
SDR39U1-209ENST00000554947 USP17L2Q6R6M4 530 aa28.77■■■□□ 2.2
SDR39U1-209ENST00000554947 C12orf42Q96LP6 360 aa28.77■■■□□ 2.2
SDR39U1-209ENST00000554947 ORC4O43929 436 aa28.76■■■□□ 2.19
SDR39U1-209ENST00000554947 NT5C2P49902 561 aa28.76■■■□□ 2.19
SDR39U1-209ENST00000554947 ICA1Q05084 483 aa28.76■■■□□ 2.19
SDR39U1-209ENST00000554947 CTDSPL2Q05D32 466 aa28.76■■■□□ 2.19
SDR39U1-209ENST00000554947 PABPC4Q13310 644 aaKnown RBP eCLIP28.76■■■□□ 2.19
SDR39U1-209ENST00000554947 STK11IPQ8N1F8 1099 aa28.76■■■□□ 2.19
SDR39U1-209ENST00000554947 ARHGEF10LQ9HCE6 1279 aa28.76■■■□□ 2.19
SDR39U1-209ENST00000554947 MYH4Q9Y623 1939 aa28.75■■■□□ 2.19
SDR39U1-209ENST00000554947 PARK7Q99497 189 aaKnown RBP28.75■■■□□ 2.19
SDR39U1-209ENST00000554947 FEZ1Q99689 392 aa28.75■■■□□ 2.19
SDR39U1-209ENST00000554947 GNL3Q9BVP2 549 aaKnown RBP eCLIP28.75■■■□□ 2.19
SDR39U1-209ENST00000554947 SH2D4AQ9H788 454 aa28.75■■■□□ 2.19
SDR39U1-209ENST00000554947 GPR25O00155 361 aa28.74■■■□□ 2.19
SDR39U1-209ENST00000554947 ZNF213O14771 459 aa28.74■■■□□ 2.19
SDR39U1-209ENST00000554947 PRDM1O75626 825 aa28.74■■■□□ 2.19
SDR39U1-209ENST00000554947 CASC1Q6TDU7 716 aa28.74■■■□□ 2.19
SDR39U1-209ENST00000554947 NEDD1Q8NHV4 660 aa28.74■■■□□ 2.19
SDR39U1-209ENST00000554947 ACER1Q8TDN7 264 aa28.74■■■□□ 2.19
SDR39U1-209ENST00000554947 RNF41Q9H4P4 317 aaPredicted RBP28.74■■■□□ 2.19
SDR39U1-209ENST00000554947 PNMA3Q9UL41 463 aa28.74■■■□□ 2.19
SDR39U1-209ENST00000554947 IGKV6D-41A0A0C4DH26 115 aa28.73■■■□□ 2.19
SDR39U1-209ENST00000554947 TLR2O60603 784 aa28.73■■■□□ 2.19
SDR39U1-209ENST00000554947 CDC45O75419 566 aa28.73■■■□□ 2.19
SDR39U1-209ENST00000554947 HOXA7P31268 230 aaPredicted RBP28.73■■■□□ 2.19
SDR39U1-209ENST00000554947 SIAH1Q8IUQ4 282 aa28.73■■■□□ 2.19
SDR39U1-209ENST00000554947 STAG1Q8WVM7 1258 aa28.73■■■□□ 2.19
SDR39U1-209ENST00000554947 ESYT1Q9BSJ8 1104 aa28.73■■■□□ 2.19
SDR39U1-209ENST00000554947 R3HDMLQ9H3Y0 253 aa28.73■■■□□ 2.19
SDR39U1-209ENST00000554947 EMILIN3Q9NT22 766 aa28.73■■■□□ 2.19
SDR39U1-209ENST00000554947 TMX2Q9Y320 296 aa28.73■■■□□ 2.19
SDR39U1-209ENST00000554947 IMMTQ16891 758 aaKnown RBP28.72■■■□□ 2.19
SDR39U1-209ENST00000554947 PPP4R3BQ5MIZ7 849 aa28.72■■■□□ 2.19
SDR39U1-209ENST00000554947 AKNAD1Q5T1N1 836 aa28.72■■■□□ 2.19
SDR39U1-209ENST00000554947 TREML2Q5T2D2 321 aa28.72■■■□□ 2.19
SDR39U1-209ENST00000554947 NYAP2Q9P242 653 aa28.72■■■□□ 2.19
SDR39U1-209ENST00000554947 A0A1W2PRG0 241 aa28.71■■■□□ 2.19
SDR39U1-209ENST00000554947 TSPY3P0CV98 308 aa28.71■■■□□ 2.19
SDR39U1-209ENST00000554947 TSPY8P0CW00 308 aa28.71■■■□□ 2.19
SDR39U1-209ENST00000554947 HAND2P61296 217 aa28.71■■■□□ 2.19
SDR39U1-209ENST00000554947 NBPF3Q9H094 633 aa28.71■■■□□ 2.19
SDR39U1-209ENST00000554947 U3KPZ7 1027 aaPredicted RBP28.71■■■□□ 2.19
SDR39U1-209ENST00000554947 ADGRA2Q96PE1 1338 aa28.7■■■□□ 2.19
SDR39U1-209ENST00000554947 EEF2P13639 858 aaKnown RBP28.7■■■□□ 2.18
SDR39U1-209ENST00000554947 TFAP4Q01664 338 aa28.7■■■□□ 2.18
SDR39U1-209ENST00000554947 MFSD6Q6ZSS7 791 aa28.7■■■□□ 2.18
SDR39U1-209ENST00000554947 KIAA1211Q6ZU35 1233 aa28.7■■■□□ 2.18
SDR39U1-209ENST00000554947 SYNPO2Q9UMS6 1093 aa28.7■■■□□ 2.18
SDR39U1-209ENST00000554947 TACC3Q9Y6A5 838 aa28.7■■■□□ 2.18
SDR39U1-209ENST00000554947 FKTNO75072 461 aa28.69■■■□□ 2.18
SDR39U1-209ENST00000554947 OSBPP22059 807 aa28.69■■■□□ 2.18
SDR39U1-209ENST00000554947 PTH1RQ03431 593 aa28.69■■■□□ 2.18
SDR39U1-209ENST00000554947 ZNF296Q8WUU4 475 aaPredicted RBP28.69■■■□□ 2.18
SDR39U1-209ENST00000554947 LPAR1Q92633 364 aa28.69■■■□□ 2.18
SDR39U1-209ENST00000554947 MAP4K1Q92918 833 aa28.69■■■□□ 2.18
SDR39U1-209ENST00000554947 TSPY2A6NKD2 308 aa28.68■■■□□ 2.18
SDR39U1-209ENST00000554947 DGKZQ13574 1117 aa28.68■■■□□ 2.18
SDR39U1-209ENST00000554947 TBC1D10CQ8IV04 446 aa28.68■■■□□ 2.18
SDR39U1-209ENST00000554947 MTMR4Q9NYA4 1195 aa28.68■■■□□ 2.18
SDR39U1-209ENST00000554947 ZYXQ15942 572 aaKnown RBP28.67■■■□□ 2.18
SDR39U1-209ENST00000554947 FAM47AQ5JRC9 791 aa28.67■■■□□ 2.18
SDR39U1-209ENST00000554947 C17orf99Q6UX52 265 aa28.67■■■□□ 2.18
SDR39U1-209ENST00000554947 CLEC10AQ8IUN9 316 aa28.67■■■□□ 2.18
SDR39U1-209ENST00000554947 MKL1Q969V6 931 aa28.67■■■□□ 2.18
SDR39U1-209ENST00000554947 CEP95Q96GE4 821 aa28.67■■■□□ 2.18
SDR39U1-209ENST00000554947 VCPKMTQ9H867 229 aa28.67■■■□□ 2.18
SDR39U1-209ENST00000554947 INCENPQ9NQS7 918 aa28.67■■■□□ 2.18
SDR39U1-209ENST00000554947 RANBP6O60518 1105 aaKnown RBP28.66■■■□□ 2.18
SDR39U1-209ENST00000554947 TTLL1O95922 423 aa28.66■■■□□ 2.18
SDR39U1-209ENST00000554947 CYP2C8P10632 490 aa28.66■■■□□ 2.18
SDR39U1-209ENST00000554947 VCAM1P19320 739 aa28.66■■■□□ 2.18
SDR39U1-209ENST00000554947 SP3Q02447 781 aa28.66■■■□□ 2.18
SDR39U1-209ENST00000554947 ASCC2Q9H1I8 757 aaPredicted RBP28.66■■■□□ 2.18
SDR39U1-209ENST00000554947 GOPCQ9HD26 462 aa28.66■■■□□ 2.18
SDR39U1-209ENST00000554947 TCP11L1Q9NUJ3 509 aa28.66■■■□□ 2.18
SDR39U1-209ENST00000554947 USP17L15C9J2P7 530 aa28.65■■■□□ 2.18
SDR39U1-209ENST00000554947 USP17L13C9JLJ4 530 aa28.65■■■□□ 2.18
SDR39U1-209ENST00000554947 USP17L11C9JVI0 530 aa28.65■■■□□ 2.18
SDR39U1-209ENST00000554947 USP17L18D6R9N7 530 aa28.65■■■□□ 2.18
SDR39U1-209ENST00000554947 USP17L22D6RA61 530 aa28.65■■■□□ 2.18
SDR39U1-209ENST00000554947 USP17L17D6RBQ6 530 aa28.65■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms