RNA–Protein interactions for RNA: ENST00000554756.1

RIPK3-204, Transcript of receptor interacting serine/threonine kinase 3, humanhuman

TSL 1 (best)

Gene RIPK3, Length 1,758 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK3-204ENST00000554756 REM2Q8IYK8 340 aaPredicted RBP14.34□□□□□ -0.11
RIPK3-204ENST00000554756 ZNF444Q8N0Y2 327 aaPredicted RBP14.34□□□□□ -0.11
RIPK3-204ENST00000554756 ZNF280CQ8ND82 737 aa14.34□□□□□ -0.11
RIPK3-204ENST00000554756 CCDC17Q96LX7 622 aa14.34□□□□□ -0.11
RIPK3-204ENST00000554756 GBP4Q96PP9 640 aa14.34□□□□□ -0.11
RIPK3-204ENST00000554756 PTPN18Q99952 460 aa14.34□□□□□ -0.11
RIPK3-204ENST00000554756 BEGAINQ9BUH8 593 aa14.34□□□□□ -0.11
RIPK3-204ENST00000554756 DOCK1Q14185 1865 aa14.33□□□□□ -0.12
RIPK3-204ENST00000554756 IGF2BP3O00425 579 aaKnown RBP eCLIP14.33□□□□□ -0.12
RIPK3-204ENST00000554756 INHBEP58166 350 aa14.33□□□□□ -0.12
RIPK3-204ENST00000554756 PDE4BQ07343 736 aa14.33□□□□□ -0.12
RIPK3-204ENST00000554756 GADL1Q6ZQY3 521 aa14.33□□□□□ -0.12
RIPK3-204ENST00000554756 KIAA1211Q6ZU35 1233 aa14.33□□□□□ -0.12
RIPK3-204ENST00000554756 CLEC10AQ8IUN9 316 aa14.33□□□□□ -0.12
RIPK3-204ENST00000554756 ZNF287Q9HBT7 754 aa14.33□□□□□ -0.12
RIPK3-204ENST00000554756 CWC22Q9HCG8 908 aaKnown RBP14.33□□□□□ -0.12
RIPK3-204ENST00000554756 TOMM22Q9NS69 142 aa14.33□□□□□ -0.12
RIPK3-204ENST00000554756 RNF186Q9NXI6 227 aa14.33□□□□□ -0.12
RIPK3-204ENST00000554756 TSKSQ9UJT2 592 aa14.33□□□□□ -0.12
RIPK3-204ENST00000554756 ANAPC4Q9UJX5 808 aa14.33□□□□□ -0.12
RIPK3-204ENST00000554756 ZMYM6O95789 1325 aa14.33□□□□□ -0.12
RIPK3-204ENST00000554756 TESPA1A2RU30 521 aaPredicted RBP14.32□□□□□ -0.12
RIPK3-204ENST00000554756 ZNF213O14771 459 aa14.32□□□□□ -0.12
RIPK3-204ENST00000554756 TRPA1O75762 1119 aa14.32□□□□□ -0.12
RIPK3-204ENST00000554756 DGKZQ13574 1117 aa14.32□□□□□ -0.12
RIPK3-204ENST00000554756 FAM47AQ5JRC9 791 aa14.32□□□□□ -0.12
RIPK3-204ENST00000554756 RRP12Q5JTH9 1297 aaKnown RBP14.32□□□□□ -0.12
RIPK3-204ENST00000554756 COL13A1Q5TAT6 717 aaPredicted RBP14.32□□□□□ -0.12
RIPK3-204ENST00000554756 TMEM179Q6ZVK1 233 aa14.32□□□□□ -0.12
RIPK3-204ENST00000554756 TBC1D10CQ8IV04 446 aa14.32□□□□□ -0.12
RIPK3-204ENST00000554756 WDR18Q9BV38 432 aa14.32□□□□□ -0.12
RIPK3-204ENST00000554756 NBPF3Q9H094 633 aa14.32□□□□□ -0.12
RIPK3-204ENST00000554756 CTNNA3Q9UI47 895 aa14.32□□□□□ -0.12
RIPK3-204ENST00000554756 A0A0G2JLL6 359 aaPredicted RBP14.32□□□□□ -0.12
RIPK3-204ENST00000554756 BTBD19C9JJ37 291 aa14.32□□□□□ -0.12
RIPK3-204ENST00000554756 MTMR2Q13614 643 aa14.32□□□□□ -0.12
RIPK3-204ENST00000554756 ZYXQ15942 572 aaKnown RBP14.32□□□□□ -0.12
RIPK3-204ENST00000554756 PRRT2Q7Z6L0 340 aaPredicted RBP14.32□□□□□ -0.12
RIPK3-204ENST00000554756 FAM43AQ8N2R8 423 aa14.32□□□□□ -0.12
RIPK3-204ENST00000554756 ACER1Q8TDN7 264 aa14.32□□□□□ -0.12
RIPK3-204ENST00000554756 FEZ1Q99689 392 aa14.32□□□□□ -0.12
RIPK3-204ENST00000554756 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.32□□□□□ -0.12
RIPK3-204ENST00000554756 FOXN1O15353 648 aa14.31□□□□□ -0.12
RIPK3-204ENST00000554756 HMGCS2P54868 508 aa14.31□□□□□ -0.12
RIPK3-204ENST00000554756 TFAP4Q01664 338 aa14.31□□□□□ -0.12
RIPK3-204ENST00000554756 ATP2B2Q01814 1243 aa14.31□□□□□ -0.12
RIPK3-204ENST00000554756 MOGSQ13724 837 aa14.31□□□□□ -0.12
RIPK3-204ENST00000554756 IMMTQ16891 758 aaKnown RBP14.31□□□□□ -0.12
RIPK3-204ENST00000554756 CLEC17AQ6ZS10 378 aa14.31□□□□□ -0.12
RIPK3-204ENST00000554756 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.31□□□□□ -0.12
RIPK3-204ENST00000554756 ANO2Q9NQ90 1003 aa14.31□□□□□ -0.12
RIPK3-204ENST00000554756 U3KPZ7 1027 aaPredicted RBP14.31□□□□□ -0.12
RIPK3-204ENST00000554756 USP17L10C9JJH3 530 aa14.3□□□□□ -0.12
RIPK3-204ENST00000554756 RANBP6O60518 1105 aaKnown RBP14.3□□□□□ -0.12
RIPK3-204ENST00000554756 CD2BP2O95400 341 aaKnown RBP14.3□□□□□ -0.12
RIPK3-204ENST00000554756 TBC1D8O95759 1140 aa14.3□□□□□ -0.12
RIPK3-204ENST00000554756 BACE1P56817 501 aa14.3□□□□□ -0.12
RIPK3-204ENST00000554756 NUCB2P80303 420 aa14.3□□□□□ -0.12
RIPK3-204ENST00000554756 ICA1Q05084 483 aa14.3□□□□□ -0.12
RIPK3-204ENST00000554756 OTUD7BQ6GQQ9 843 aa14.3□□□□□ -0.12
RIPK3-204ENST00000554756 GPAT2Q6NUI2 795 aa14.3□□□□□ -0.12
RIPK3-204ENST00000554756 FASTKD5Q7L8L6 764 aaKnown RBP14.3□□□□□ -0.12
RIPK3-204ENST00000554756 SPRYD3Q8NCJ5 442 aa14.3□□□□□ -0.12
RIPK3-204ENST00000554756 LSG1Q9H089 658 aaKnown RBP14.3□□□□□ -0.12
RIPK3-204ENST00000554756 RBM8AQ9Y5S9 174 aaKnown RBP14.3□□□□□ -0.12
RIPK3-204ENST00000554756 LAMB1P07942 1786 aa14.3□□□□□ -0.12
RIPK3-204ENST00000554756 A0A1W2PRG0 241 aa14.29□□□□□ -0.12
RIPK3-204ENST00000554756 TSPY3P0CV98 308 aa14.29□□□□□ -0.12
RIPK3-204ENST00000554756 TSPY8P0CW00 308 aa14.29□□□□□ -0.12
RIPK3-204ENST00000554756 AKNAD1Q5T1N1 836 aa14.29□□□□□ -0.12
RIPK3-204ENST00000554756 MFSD6Q6ZSS7 791 aa14.29□□□□□ -0.12
RIPK3-204ENST00000554756 SIAH1Q8IUQ4 282 aa14.29□□□□□ -0.12
RIPK3-204ENST00000554756 STAG1Q8WVM7 1258 aa14.29□□□□□ -0.12
RIPK3-204ENST00000554756 MAP4K1Q92918 833 aa14.29□□□□□ -0.12
RIPK3-204ENST00000554756 TMOD4Q9NZQ9 345 aa14.29□□□□□ -0.12
RIPK3-204ENST00000554756 TSPY2A6NKD2 308 aa14.29□□□□□ -0.12
RIPK3-204ENST00000554756 PDHXO00330 501 aa14.29□□□□□ -0.12
RIPK3-204ENST00000554756 ORC4O43929 436 aa14.29□□□□□ -0.12
RIPK3-204ENST00000554756 EEF2P13639 858 aaKnown RBP14.29□□□□□ -0.12
RIPK3-204ENST00000554756 TREML2Q5T2D2 321 aa14.29□□□□□ -0.12
RIPK3-204ENST00000554756 USP17L2Q6R6M4 530 aa14.29□□□□□ -0.12
RIPK3-204ENST00000554756 ANKRD23Q86SG2 305 aa14.29□□□□□ -0.12
RIPK3-204ENST00000554756 KANSL2Q9H9L4 492 aa14.29□□□□□ -0.12
RIPK3-204ENST00000554756 ARHGEF10LQ9HCE6 1279 aa14.29□□□□□ -0.12
RIPK3-204ENST00000554756 ATAD5Q96QE3 1844 aa14.28□□□□□ -0.12
RIPK3-204ENST00000554756 NEDD4P46934 1319 aa14.28□□□□□ -0.12
RIPK3-204ENST00000554756 C19orf81C9J6K1 198 aa14.28□□□□□ -0.12
RIPK3-204ENST00000554756 ALDH1A1P00352 501 aa14.28□□□□□ -0.12
RIPK3-204ENST00000554756 FGRP09769 529 aa14.28□□□□□ -0.12
RIPK3-204ENST00000554756 TAF1CQ15572 869 aaPredicted RBP14.28□□□□□ -0.12
RIPK3-204ENST00000554756 SKOR2Q2VWA4 1001 aaPredicted RBP14.28□□□□□ -0.12
RIPK3-204ENST00000554756 SH3D19Q5HYK7 790 aa14.28□□□□□ -0.12
RIPK3-204ENST00000554756 NEDD1Q8NHV4 660 aa14.28□□□□□ -0.12
RIPK3-204ENST00000554756 NKX2-3Q8TAU0 364 aa14.28□□□□□ -0.12
RIPK3-204ENST00000554756 R3HDMLQ9H3Y0 253 aa14.28□□□□□ -0.12
RIPK3-204ENST00000554756 RNF41Q9H4P4 317 aaPredicted RBP14.28□□□□□ -0.12
RIPK3-204ENST00000554756 EMILIN3Q9NT22 766 aa14.28□□□□□ -0.12
RIPK3-204ENST00000554756 CA12O43570 354 aa14.27□□□□□ -0.12
RIPK3-204ENST00000554756 HSPA8P11142 646 aaKnown RBP14.27□□□□□ -0.12
RIPK3-204ENST00000554756 CEP95Q96GE4 821 aa14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms